Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0327:0306
Extra
PDB:
ATOM 1 O3' C A 326 14.416 133.429 42.168 1.00 48.43 O
ATOM 2 P A A 327 15.337 133.485 40.866 1.00 50.25 P
ATOM 3 OP1 A A 327 15.332 132.132 40.251 1.00 50.25 O
ATOM 4 OP2 A A 327 16.619 134.115 41.246 1.00 51.96 O
ATOM 5 O5' A A 327 14.569 134.501 39.914 1.00 51.15 O
ATOM 6 C5' A A 327 13.260 134.186 39.417 1.00 47.71 C
ATOM 7 C4' A A 327 13.139 134.596 37.973 1.00 45.73 C
ATOM 8 O4' A A 327 12.982 136.037 37.893 1.00 44.81 O
ATOM 9 C3' A A 327 14.322 134.240 37.080 1.00 45.03 C
ATOM 10 O3' A A 327 13.850 133.878 35.795 1.00 46.44 O
ATOM 11 C2' A A 327 15.061 135.573 36.979 1.00 46.17 C
ATOM 12 O2' A A 327 15.855 135.698 35.820 1.00 46.52 O
ATOM 13 C1' A A 327 13.889 136.547 36.947 1.00 46.17 C
ATOM 14 N9 A A 327 14.173 137.935 37.295 1.00 48.28 N
ATOM 15 C8 A A 327 15.131 138.441 38.132 1.00 49.13 C
ATOM 16 N7 A A 327 15.093 139.745 38.249 1.00 50.43 N
ATOM 17 C5 A A 327 14.043 140.124 37.427 1.00 50.36 C
ATOM 18 C6 A A 327 13.478 141.379 37.123 1.00 51.13 C
ATOM 19 N6 A A 327 13.902 142.534 37.644 1.00 49.69 N
ATOM 20 N1 A A 327 12.441 141.406 36.259 1.00 50.75 N
ATOM 21 C2 A A 327 12.003 140.249 35.751 1.00 50.08 C
ATOM 22 N3 A A 327 12.442 139.013 35.968 1.00 49.35 N
ATOM 23 C4 A A 327 13.474 139.020 36.826 1.00 49.53 C
ATOM 24 P A A 328 13.472 132.348 35.483 1.00 50.11 P
ATOM 25 OP1 A A 328 11.988 132.270 35.430 1.00 46.35 O
ATOM 26 OP2 A A 328 14.224 131.465 36.412 1.00 51.43 O
ATOM 27 O5' A A 328 14.051 132.098 34.021 1.00 47.30 O
TER
ATOM 1 O3' A B 305 9.120 142.248 40.582 1.00 51.33 O
ATOM 2 P U B 306 9.650 142.093 39.077 1.00 53.48 P
ATOM 3 OP1 U B 306 10.459 143.290 38.745 1.00 53.22 O
ATOM 4 OP2 U B 306 8.494 141.725 38.221 1.00 55.62 O
ATOM 5 O5' U B 306 10.633 140.842 39.156 1.00 55.92 O
ATOM 6 C5' U B 306 10.154 139.490 39.004 1.00 59.82 C
ATOM 7 C4' U B 306 10.934 138.553 39.902 1.00 63.11 C
ATOM 8 O4' U B 306 12.358 138.793 39.709 1.00 64.61 O
ATOM 9 C3' U B 306 10.719 138.750 41.397 1.00 64.58 C
ATOM 10 O3' U B 306 9.516 138.138 41.908 1.00 65.15 O
ATOM 11 C2' U B 306 12.024 138.274 42.023 1.00 66.45 C
ATOM 12 O2' U B 306 12.100 136.892 42.265 1.00 70.20 O
ATOM 13 C1' U B 306 13.042 138.643 40.943 1.00 66.53 C
ATOM 14 N1 U B 306 13.832 139.853 41.225 1.00 67.28 N
ATOM 15 C2 U B 306 15.150 139.677 41.627 1.00 69.11 C
ATOM 16 O2 U B 306 15.670 138.575 41.754 1.00 69.40 O
ATOM 17 N3 U B 306 15.840 140.837 41.873 1.00 68.90 N
ATOM 18 C4 U B 306 15.368 142.124 41.757 1.00 69.03 C
ATOM 19 O4 U B 306 16.128 143.067 41.983 1.00 70.35 O
ATOM 20 C5 U B 306 14.003 142.225 41.342 1.00 68.59 C
ATOM 21 C6 U B 306 13.298 141.114 41.098 1.00 68.15 C
ATOM 22 P A B 307 9.145 136.587 41.578 1.00 65.02 P
ATOM 23 OP1 A B 307 10.324 135.730 41.326 1.00 64.19 O
ATOM 24 OP2 A B 307 8.070 136.640 40.554 1.00 65.28 O
ATOM 25 O5' A B 307 8.448 136.084 42.919 1.00 62.02 O
TER
ATOM 2 P A A 327 15.337 133.485 40.866 1.00 50.25 P
ATOM 3 OP1 A A 327 15.332 132.132 40.251 1.00 50.25 O
ATOM 4 OP2 A A 327 16.619 134.115 41.246 1.00 51.96 O
ATOM 5 O5' A A 327 14.569 134.501 39.914 1.00 51.15 O
ATOM 6 C5' A A 327 13.260 134.186 39.417 1.00 47.71 C
ATOM 7 C4' A A 327 13.139 134.596 37.973 1.00 45.73 C
ATOM 8 O4' A A 327 12.982 136.037 37.893 1.00 44.81 O
ATOM 9 C3' A A 327 14.322 134.240 37.080 1.00 45.03 C
ATOM 10 O3' A A 327 13.850 133.878 35.795 1.00 46.44 O
ATOM 11 C2' A A 327 15.061 135.573 36.979 1.00 46.17 C
ATOM 12 O2' A A 327 15.855 135.698 35.820 1.00 46.52 O
ATOM 13 C1' A A 327 13.889 136.547 36.947 1.00 46.17 C
ATOM 14 N9 A A 327 14.173 137.935 37.295 1.00 48.28 N
ATOM 15 C8 A A 327 15.131 138.441 38.132 1.00 49.13 C
ATOM 16 N7 A A 327 15.093 139.745 38.249 1.00 50.43 N
ATOM 17 C5 A A 327 14.043 140.124 37.427 1.00 50.36 C
ATOM 18 C6 A A 327 13.478 141.379 37.123 1.00 51.13 C
ATOM 19 N6 A A 327 13.902 142.534 37.644 1.00 49.69 N
ATOM 20 N1 A A 327 12.441 141.406 36.259 1.00 50.75 N
ATOM 21 C2 A A 327 12.003 140.249 35.751 1.00 50.08 C
ATOM 22 N3 A A 327 12.442 139.013 35.968 1.00 49.35 N
ATOM 23 C4 A A 327 13.474 139.020 36.826 1.00 49.53 C
ATOM 24 P A A 328 13.472 132.348 35.483 1.00 50.11 P
ATOM 25 OP1 A A 328 11.988 132.270 35.430 1.00 46.35 O
ATOM 26 OP2 A A 328 14.224 131.465 36.412 1.00 51.43 O
ATOM 27 O5' A A 328 14.051 132.098 34.021 1.00 47.30 O
TER
ATOM 1 O3' A B 305 9.120 142.248 40.582 1.00 51.33 O
ATOM 2 P U B 306 9.650 142.093 39.077 1.00 53.48 P
ATOM 3 OP1 U B 306 10.459 143.290 38.745 1.00 53.22 O
ATOM 4 OP2 U B 306 8.494 141.725 38.221 1.00 55.62 O
ATOM 5 O5' U B 306 10.633 140.842 39.156 1.00 55.92 O
ATOM 6 C5' U B 306 10.154 139.490 39.004 1.00 59.82 C
ATOM 7 C4' U B 306 10.934 138.553 39.902 1.00 63.11 C
ATOM 8 O4' U B 306 12.358 138.793 39.709 1.00 64.61 O
ATOM 9 C3' U B 306 10.719 138.750 41.397 1.00 64.58 C
ATOM 10 O3' U B 306 9.516 138.138 41.908 1.00 65.15 O
ATOM 11 C2' U B 306 12.024 138.274 42.023 1.00 66.45 C
ATOM 12 O2' U B 306 12.100 136.892 42.265 1.00 70.20 O
ATOM 13 C1' U B 306 13.042 138.643 40.943 1.00 66.53 C
ATOM 14 N1 U B 306 13.832 139.853 41.225 1.00 67.28 N
ATOM 15 C2 U B 306 15.150 139.677 41.627 1.00 69.11 C
ATOM 16 O2 U B 306 15.670 138.575 41.754 1.00 69.40 O
ATOM 17 N3 U B 306 15.840 140.837 41.873 1.00 68.90 N
ATOM 18 C4 U B 306 15.368 142.124 41.757 1.00 69.03 C
ATOM 19 O4 U B 306 16.128 143.067 41.983 1.00 70.35 O
ATOM 20 C5 U B 306 14.003 142.225 41.342 1.00 68.59 C
ATOM 21 C6 U B 306 13.298 141.114 41.098 1.00 68.15 C
ATOM 22 P A B 307 9.145 136.587 41.578 1.00 65.02 P
ATOM 23 OP1 A B 307 10.324 135.730 41.326 1.00 64.19 O
ATOM 24 OP2 A B 307 8.070 136.640 40.554 1.00 65.28 O
ATOM 25 O5' A B 307 8.448 136.084 42.919 1.00 62.02 O
TER
Atoms:
OP1: (15.332,132.132,40.251)
OP2: (16.619,134.115,41.246)
C3': (14.322,134.240,37.080)
C1': (13.889,136.547,36.947)
C5': (13.260,134.186,39.417)
O4': (12.982,136.037,37.893)
C8: (15.131,138.441,38.132)
O2': (15.855,135.698,35.820)
C6: (13.478,141.379,37.123)
C5: (14.043,140.124,37.427)
C4: (13.474,139.020,36.826)
P: (15.337,133.485,40.866)
C4': (13.139,134.596,37.973)
C2': (15.061,135.573,36.979)
C2: (12.003,140.249,35.751)
N1: (12.441,141.406,36.259)
N3: (12.442,139.013,35.968)
N6: (13.902,142.534,37.644)
N7: (15.093,139.745,38.249)
N9: (14.173,137.935,37.295)
O5': (14.569,134.501,39.914)
O3': (13.850,133.878,35.795)
OP2: (16.619,134.115,41.246)
C3': (14.322,134.240,37.080)
C1': (13.889,136.547,36.947)
C5': (13.260,134.186,39.417)
O4': (12.982,136.037,37.893)
C8: (15.131,138.441,38.132)
O2': (15.855,135.698,35.820)
C6: (13.478,141.379,37.123)
C5: (14.043,140.124,37.427)
C4: (13.474,139.020,36.826)
P: (15.337,133.485,40.866)
C4': (13.139,134.596,37.973)
C2': (15.061,135.573,36.979)
C2: (12.003,140.249,35.751)
N1: (12.441,141.406,36.259)
N3: (12.442,139.013,35.968)
N6: (13.902,142.534,37.644)
N7: (15.093,139.745,38.249)
N9: (14.173,137.935,37.295)
O5': (14.569,134.501,39.914)
O3': (13.850,133.878,35.795)
C4: (15.368,142.124,41.757)
N3: (15.840,140.837,41.873)
OP1: (10.459,143.290,38.745)
OP2: (8.494,141.725,38.221)
C2: (15.150,139.677,41.627)
C1': (13.042,138.643,40.943)
C3': (10.719,138.750,41.397)
O5': (10.633,140.842,39.156)
O4': (12.358,138.793,39.709)
C5': (10.154,139.490,39.004)
P: (9.650,142.093,39.077)
C4': (10.934,138.553,39.902)
C2': (12.024,138.274,42.023)
O2': (12.100,136.892,42.265)
N1: (13.832,139.853,41.225)
O4: (16.128,143.067,41.983)
O2: (15.670,138.575,41.754)
C6: (13.298,141.114,41.098)
C5: (14.003,142.225,41.342)
O3': (9.516,138.138,41.908)
N3: (15.840,140.837,41.873)
OP1: (10.459,143.290,38.745)
OP2: (8.494,141.725,38.221)
C2: (15.150,139.677,41.627)
C1': (13.042,138.643,40.943)
C3': (10.719,138.750,41.397)
O5': (10.633,140.842,39.156)
O4': (12.358,138.793,39.709)
C5': (10.154,139.490,39.004)
P: (9.650,142.093,39.077)
C4': (10.934,138.553,39.902)
C2': (12.024,138.274,42.023)
O2': (12.100,136.892,42.265)
N1: (13.832,139.853,41.225)
O4: (16.128,143.067,41.983)
O2: (15.670,138.575,41.754)
C6: (13.298,141.114,41.098)
C5: (14.003,142.225,41.342)
O3': (9.516,138.138,41.908)
Image (generated by PyMOL):