ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02042:02380

Extra

PDB:
ATOM 1 O3' A A2041 49.102 126.154 101.108 1.00 35.89 O
ATOM 2 P A A2042 49.719 125.794 99.665 1.00 36.41 P
ATOM 3 OP1 A A2042 49.713 126.999 98.802 1.00 34.73 O
ATOM 4 OP2 A A2042 49.007 124.576 99.222 1.00 34.99 O
ATOM 5 O5' A A2042 51.222 125.388 99.988 1.00 34.28 O
ATOM 6 C5' A A2042 51.499 124.180 100.697 1.00 35.42 C
ATOM 7 C4' A A2042 52.567 124.409 101.734 1.00 34.69 C
ATOM 8 O4' A A2042 52.709 123.203 102.521 1.00 30.84 O
ATOM 9 C3' A A2042 53.946 124.722 101.173 1.00 35.66 C
ATOM 10 O3' A A2042 54.098 126.139 101.136 1.00 38.70 O
ATOM 11 C2' A A2042 54.890 124.117 102.204 1.00 35.20 C
ATOM 12 O2' A A2042 55.137 125.030 103.252 1.00 35.86 O
ATOM 13 C1' A A2042 54.073 122.921 102.723 1.00 32.64 C
ATOM 14 N9 A A2042 54.331 121.614 102.126 1.00 31.69 N
ATOM 15 C8 A A2042 54.656 120.464 102.795 1.00 32.19 C
ATOM 16 N7 A A2042 54.790 119.418 102.017 1.00 34.78 N
ATOM 17 C5 A A2042 54.552 119.916 100.743 1.00 33.77 C
ATOM 18 C6 A A2042 54.558 119.312 99.477 1.00 33.64 C
ATOM 19 N6 A A2042 54.842 118.022 99.271 1.00 34.60 N
ATOM 20 N1 A A2042 54.267 120.087 98.410 1.00 34.55 N
ATOM 21 C2 A A2042 54.002 121.379 98.613 1.00 34.35 C
ATOM 22 N3 A A2042 53.977 122.066 99.754 1.00 35.15 N
ATOM 23 C4 A A2042 54.266 121.268 100.795 1.00 33.70 C
ATOM 24 P G A2043 54.965 126.839 99.975 1.00 38.14 P
ATOM 25 OP1 G A2043 54.854 126.002 98.764 1.00 41.75 O
ATOM 26 OP2 G A2043 56.304 127.149 100.522 1.00 40.40 O
ATOM 27 O5' G A2043 54.186 128.209 99.722 1.00 34.32 O
TER

ATOM 1 O3' A B2379 59.653 122.223 95.672 1.00 70.62 O
ATOM 2 P U B2380 58.282 121.515 96.147 1.00 66.53 P
ATOM 3 OP1 U B2380 58.496 120.043 96.178 1.00 66.02 O
ATOM 4 OP2 U B2380 57.180 122.087 95.334 1.00 67.14 O
ATOM 5 O5' U B2380 58.070 122.001 97.648 1.00 65.74 O
ATOM 6 C5' U B2380 57.420 123.251 97.930 1.00 61.47 C
ATOM 7 C4' U B2380 57.907 123.803 99.243 1.00 60.69 C
ATOM 8 O4' U B2380 57.397 122.966 100.321 1.00 58.80 O
ATOM 9 C3' U B2380 59.425 123.852 99.406 1.00 59.93 C
ATOM 10 O3' U B2380 59.830 125.036 100.073 1.00 62.64 O
ATOM 11 C2' U B2380 59.723 122.607 100.238 1.00 59.00 C
ATOM 12 O2' U B2380 60.886 122.715 101.035 1.00 56.63 O
ATOM 13 C1' U B2380 58.470 122.496 101.109 1.00 56.70 C
ATOM 14 N1 U B2380 58.185 121.105 101.501 1.00 53.05 N
ATOM 15 C2 U B2380 58.041 120.822 102.856 1.00 50.68 C
ATOM 16 O2 U B2380 58.073 121.674 103.726 1.00 47.36 O
ATOM 17 N3 U B2380 57.856 119.497 103.151 1.00 49.91 N
ATOM 18 C4 U B2380 57.782 118.452 102.259 1.00 51.07 C
ATOM 19 O4 U B2380 57.629 117.306 102.683 1.00 51.80 O
ATOM 20 C5 U B2380 57.897 118.829 100.883 1.00 51.87 C
ATOM 21 C6 U B2380 58.089 120.106 100.560 1.00 51.52 C
ATOM 22 P G B2381 60.948 125.975 99.397 1.00 63.53 P
ATOM 23 OP1 G B2381 61.015 127.251 100.157 1.00 64.29 O
ATOM 24 OP2 G B2381 60.704 126.001 97.935 1.00 65.07 O
ATOM 25 O5' G B2381 62.309 125.185 99.622 1.00 63.48 O
TER

Atoms:
OP1: (49.713,126.999,98.802)
OP2: (49.007,124.576,99.222)
C3': (53.946,124.722,101.173)
C1': (54.073,122.921,102.723)
C5': (51.499,124.180,100.697)
O4': (52.709,123.203,102.521)
C8: (54.656,120.464,102.795)
O2': (55.137,125.030,103.252)
C6: (54.558,119.312,99.477)
C5: (54.552,119.916,100.743)
C4: (54.266,121.268,100.795)
P: (49.719,125.794,99.665)
C4': (52.567,124.409,101.734)
C2': (54.890,124.117,102.204)
C2: (54.002,121.379,98.613)
N1: (54.267,120.087,98.410)
N3: (53.977,122.066,99.754)
N6: (54.842,118.022,99.271)
N7: (54.790,119.418,102.017)
N9: (54.331,121.614,102.126)
O5': (51.222,125.388,99.988)
O3': (54.098,126.139,101.136)
C4: (57.782,118.452,102.259)
N3: (57.856,119.497,103.151)
OP1: (58.496,120.043,96.178)
OP2: (57.180,122.087,95.334)
C2: (58.041,120.822,102.856)
C1': (58.470,122.496,101.109)
C3': (59.425,123.852,99.406)
O5': (58.070,122.001,97.648)
O4': (57.397,122.966,100.321)
C5': (57.420,123.251,97.930)
P: (58.282,121.515,96.147)
C4': (57.907,123.803,99.243)
C2': (59.723,122.607,100.238)
O2': (60.886,122.715,101.035)
N1: (58.185,121.105,101.501)
O4: (57.629,117.306,102.683)
O2: (58.073,121.674,103.726)
C6: (58.089,120.106,100.560)
C5: (57.897,118.829,100.883)
O3': (59.830,125.036,100.073)
Image (generated by PyMOL):
PyMOL image
show in jmol