Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:G8:G7
Extra
PDB:
ATOM 1 O3' C A 7 41.023 -38.820 -12.974 1.00 43.09 O
ATOM 2 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 3 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 4 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 5 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
ATOM 6 C5' G A 8 40.750 -37.373 -15.698 1.00 47.18 C
ATOM 7 C4' G A 8 39.672 -36.492 -16.251 1.00 48.10 C
ATOM 8 O4' G A 8 38.649 -36.381 -15.232 1.00 47.82 O
ATOM 9 C3' G A 8 40.093 -35.057 -16.487 1.00 49.31 C
ATOM 10 O3' G A 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 11 C2' G A 8 38.757 -34.363 -16.388 1.00 49.21 C
ATOM 12 O2' G A 8 38.027 -34.540 -17.580 1.00 49.58 O
ATOM 13 C1' G A 8 38.106 -35.083 -15.230 1.00 47.54 C
ATOM 14 N9 G A 8 38.315 -34.454 -13.935 1.00 46.26 N
ATOM 15 C8 G A 8 39.285 -34.690 -12.997 1.00 45.76 C
ATOM 16 N7 G A 8 39.168 -33.955 -11.926 1.00 44.71 N
ATOM 17 C5 G A 8 38.036 -33.192 -12.170 1.00 45.87 C
ATOM 18 C6 G A 8 37.375 -32.212 -11.405 1.00 46.40 C
ATOM 19 O6 G A 8 37.636 -31.765 -10.303 1.00 48.49 O
ATOM 20 N1 G A 8 36.268 -31.682 -12.017 1.00 46.26 N
ATOM 21 C2 G A 8 35.826 -32.036 -13.237 1.00 45.90 C
ATOM 22 N2 G A 8 34.732 -31.387 -13.641 1.00 46.20 N
ATOM 23 N3 G A 8 36.414 -32.953 -13.985 1.00 46.00 N
ATOM 24 C4 G A 8 37.509 -33.486 -13.395 1.00 46.26 C
ATOM 25 P U A 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 26 OP1 U A 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 27 OP2 U A 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 28 O5' U A 9 41.704 -32.545 -18.202 1.00 56.47 O
TER
ATOM 1 O3' U B 6 40.351 -38.717 -6.818 1.00 37.51 O
ATOM 2 P C B 7 41.217 -37.768 -7.758 1.00 38.46 P
ATOM 3 OP1 C B 7 42.562 -38.334 -7.650 1.00 39.22 O
ATOM 4 OP2 C B 7 41.007 -36.332 -7.496 1.00 37.38 O
ATOM 5 O5' C B 7 40.648 -38.062 -9.224 1.00 40.71 O
ATOM 6 C5' C B 7 40.854 -39.331 -9.843 1.00 42.26 C
ATOM 7 C4' C B 7 39.939 -39.518 -11.034 1.00 42.55 C
ATOM 8 O4' C B 7 38.579 -39.359 -10.592 1.00 43.68 O
ATOM 9 C3' C B 7 40.015 -38.495 -12.116 1.00 42.64 C
ATOM 10 O3' C B 7 41.023 -38.820 -12.974 1.00 43.09 O
ATOM 11 C2' C B 7 38.722 -38.772 -12.809 1.00 43.22 C
ATOM 12 O2' C B 7 38.916 -39.947 -13.535 1.00 42.92 O
ATOM 13 C1' C B 7 37.758 -38.954 -11.655 1.00 43.16 C
ATOM 14 N1 C B 7 37.079 -37.682 -11.308 1.00 42.85 N
ATOM 15 C2 C B 7 36.054 -37.230 -12.120 1.00 42.96 C
ATOM 16 O2 C B 7 35.733 -37.934 -13.069 1.00 43.01 O
ATOM 17 N3 C B 7 35.426 -36.060 -11.849 1.00 43.18 N
ATOM 18 C4 C B 7 35.807 -35.346 -10.799 1.00 43.49 C
ATOM 19 N4 C B 7 35.183 -34.196 -10.550 1.00 44.24 N
ATOM 20 C5 C B 7 36.850 -35.793 -9.949 1.00 43.79 C
ATOM 21 C6 C B 7 37.455 -36.950 -10.231 1.00 43.30 C
ATOM 22 P G B 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 23 OP1 G B 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 24 OP2 G B 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 25 O5' G B 8 41.133 -36.823 -14.452 1.00 46.52 O
TER
ATOM 2 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 3 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 4 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 5 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
ATOM 6 C5' G A 8 40.750 -37.373 -15.698 1.00 47.18 C
ATOM 7 C4' G A 8 39.672 -36.492 -16.251 1.00 48.10 C
ATOM 8 O4' G A 8 38.649 -36.381 -15.232 1.00 47.82 O
ATOM 9 C3' G A 8 40.093 -35.057 -16.487 1.00 49.31 C
ATOM 10 O3' G A 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 11 C2' G A 8 38.757 -34.363 -16.388 1.00 49.21 C
ATOM 12 O2' G A 8 38.027 -34.540 -17.580 1.00 49.58 O
ATOM 13 C1' G A 8 38.106 -35.083 -15.230 1.00 47.54 C
ATOM 14 N9 G A 8 38.315 -34.454 -13.935 1.00 46.26 N
ATOM 15 C8 G A 8 39.285 -34.690 -12.997 1.00 45.76 C
ATOM 16 N7 G A 8 39.168 -33.955 -11.926 1.00 44.71 N
ATOM 17 C5 G A 8 38.036 -33.192 -12.170 1.00 45.87 C
ATOM 18 C6 G A 8 37.375 -32.212 -11.405 1.00 46.40 C
ATOM 19 O6 G A 8 37.636 -31.765 -10.303 1.00 48.49 O
ATOM 20 N1 G A 8 36.268 -31.682 -12.017 1.00 46.26 N
ATOM 21 C2 G A 8 35.826 -32.036 -13.237 1.00 45.90 C
ATOM 22 N2 G A 8 34.732 -31.387 -13.641 1.00 46.20 N
ATOM 23 N3 G A 8 36.414 -32.953 -13.985 1.00 46.00 N
ATOM 24 C4 G A 8 37.509 -33.486 -13.395 1.00 46.26 C
ATOM 25 P U A 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 26 OP1 U A 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 27 OP2 U A 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 28 O5' U A 9 41.704 -32.545 -18.202 1.00 56.47 O
TER
ATOM 1 O3' U B 6 40.351 -38.717 -6.818 1.00 37.51 O
ATOM 2 P C B 7 41.217 -37.768 -7.758 1.00 38.46 P
ATOM 3 OP1 C B 7 42.562 -38.334 -7.650 1.00 39.22 O
ATOM 4 OP2 C B 7 41.007 -36.332 -7.496 1.00 37.38 O
ATOM 5 O5' C B 7 40.648 -38.062 -9.224 1.00 40.71 O
ATOM 6 C5' C B 7 40.854 -39.331 -9.843 1.00 42.26 C
ATOM 7 C4' C B 7 39.939 -39.518 -11.034 1.00 42.55 C
ATOM 8 O4' C B 7 38.579 -39.359 -10.592 1.00 43.68 O
ATOM 9 C3' C B 7 40.015 -38.495 -12.116 1.00 42.64 C
ATOM 10 O3' C B 7 41.023 -38.820 -12.974 1.00 43.09 O
ATOM 11 C2' C B 7 38.722 -38.772 -12.809 1.00 43.22 C
ATOM 12 O2' C B 7 38.916 -39.947 -13.535 1.00 42.92 O
ATOM 13 C1' C B 7 37.758 -38.954 -11.655 1.00 43.16 C
ATOM 14 N1 C B 7 37.079 -37.682 -11.308 1.00 42.85 N
ATOM 15 C2 C B 7 36.054 -37.230 -12.120 1.00 42.96 C
ATOM 16 O2 C B 7 35.733 -37.934 -13.069 1.00 43.01 O
ATOM 17 N3 C B 7 35.426 -36.060 -11.849 1.00 43.18 N
ATOM 18 C4 C B 7 35.807 -35.346 -10.799 1.00 43.49 C
ATOM 19 N4 C B 7 35.183 -34.196 -10.550 1.00 44.24 N
ATOM 20 C5 C B 7 36.850 -35.793 -9.949 1.00 43.79 C
ATOM 21 C6 C B 7 37.455 -36.950 -10.231 1.00 43.30 C
ATOM 22 P G B 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 23 OP1 G B 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 24 OP2 G B 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 25 O5' G B 8 41.133 -36.823 -14.452 1.00 46.52 O
TER
Atoms:
OP1: (43.192,-38.199,-14.060)
OP2: (42.253,-36.793,-12.201)
C3': (40.093,-35.057,-16.487)
C1': (38.106,-35.083,-15.230)
C5': (40.750,-37.373,-15.698)
O6: (37.636,-31.765,-10.303)
O4': (38.649,-36.381,-15.232)
C8: (39.285,-34.690,-12.997)
C2: (35.826,-32.036,-13.237)
C6: (37.375,-32.212,-11.405)
C5: (38.036,-33.192,-12.170)
C4: (37.509,-33.486,-13.395)
P: (42.009,-37.640,-13.387)
C4': (39.672,-36.492,-16.251)
C2': (38.757,-34.363,-16.388)
O2': (38.027,-34.540,-17.580)
N1: (36.268,-31.682,-12.017)
N2: (34.732,-31.387,-13.641)
N3: (36.414,-32.953,-13.985)
N7: (39.168,-33.955,-11.926)
N9: (38.315,-34.454,-13.935)
O5': (41.133,-36.823,-14.452)
O3': (40.634,-34.787,-17.770)
OP2: (42.253,-36.793,-12.201)
C3': (40.093,-35.057,-16.487)
C1': (38.106,-35.083,-15.230)
C5': (40.750,-37.373,-15.698)
O6: (37.636,-31.765,-10.303)
O4': (38.649,-36.381,-15.232)
C8: (39.285,-34.690,-12.997)
C2: (35.826,-32.036,-13.237)
C6: (37.375,-32.212,-11.405)
C5: (38.036,-33.192,-12.170)
C4: (37.509,-33.486,-13.395)
P: (42.009,-37.640,-13.387)
C4': (39.672,-36.492,-16.251)
C2': (38.757,-34.363,-16.388)
O2': (38.027,-34.540,-17.580)
N1: (36.268,-31.682,-12.017)
N2: (34.732,-31.387,-13.641)
N3: (36.414,-32.953,-13.985)
N7: (39.168,-33.955,-11.926)
N9: (38.315,-34.454,-13.935)
O5': (41.133,-36.823,-14.452)
O3': (40.634,-34.787,-17.770)
C2: (36.054,-37.230,-12.120)
OP1: (42.562,-38.334,-7.650)
OP2: (41.007,-36.332,-7.496)
C4: (35.807,-35.346,-10.799)
O5': (40.648,-38.062,-9.224)
C3': (40.015,-38.495,-12.116)
C1': (37.758,-38.954,-11.655)
O4': (38.579,-39.359,-10.592)
C5': (40.854,-39.331,-9.843)
P: (41.217,-37.768,-7.758)
O2: (35.733,-37.934,-13.069)
C4': (39.939,-39.518,-11.034)
C2': (38.722,-38.772,-12.809)
O2': (38.916,-39.947,-13.535)
N1: (37.079,-37.682,-11.308)
N3: (35.426,-36.060,-11.849)
N4: (35.183,-34.196,-10.550)
C6: (37.455,-36.950,-10.231)
C5: (36.850,-35.793,-9.949)
O3': (41.023,-38.820,-12.974)
OP1: (42.562,-38.334,-7.650)
OP2: (41.007,-36.332,-7.496)
C4: (35.807,-35.346,-10.799)
O5': (40.648,-38.062,-9.224)
C3': (40.015,-38.495,-12.116)
C1': (37.758,-38.954,-11.655)
O4': (38.579,-39.359,-10.592)
C5': (40.854,-39.331,-9.843)
P: (41.217,-37.768,-7.758)
O2: (35.733,-37.934,-13.069)
C4': (39.939,-39.518,-11.034)
C2': (38.722,-38.772,-12.809)
O2': (38.916,-39.947,-13.535)
N1: (37.079,-37.682,-11.308)
N3: (35.426,-36.060,-11.849)
N4: (35.183,-34.196,-10.550)
C6: (37.455,-36.950,-10.231)
C5: (36.850,-35.793,-9.949)
O3': (41.023,-38.820,-12.974)
Image (generated by PyMOL):