ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q96:C7:C9

Extra

PDB:
ATOM 1 O3' C A 6 9.870 33.868 34.046 1.00 18.59 O
ATOM 2 P A A 7 10.078 35.013 35.163 1.00 23.83 P
ATOM 3 OP1 A A 7 8.873 35.040 36.020 1.00 22.08 O
ATOM 4 OP2 A A 7 10.492 36.252 34.446 1.00 29.01 O
ATOM 5 O5' A A 7 11.301 34.542 36.065 1.00 22.16 O
ATOM 6 C5' A A 7 11.672 35.296 37.218 1.00 16.75 C
ATOM 7 C4' A A 7 12.818 34.633 37.939 1.00 15.72 C
ATOM 8 O4' A A 7 12.433 33.279 38.329 1.00 16.83 O
ATOM 9 C3' A A 7 14.114 34.482 37.149 1.00 15.96 C
ATOM 10 O3' A A 7 15.184 34.462 38.078 1.00 21.56 O
ATOM 11 C2' A A 7 13.976 33.065 36.603 1.00 11.57 C
ATOM 12 O2' A A 7 15.200 32.459 36.248 1.00 17.77 O
ATOM 13 C1' A A 7 13.378 32.362 37.818 1.00 16.92 C
ATOM 14 N9 A A 7 12.703 31.109 37.480 1.00 18.51 N
ATOM 15 C8 A A 7 11.467 30.913 36.910 1.00 19.66 C
ATOM 16 N7 A A 7 11.190 29.652 36.676 1.00 21.47 N
ATOM 17 C5 A A 7 12.308 28.974 37.138 1.00 20.62 C
ATOM 18 C6 A A 7 12.636 27.612 37.173 1.00 22.73 C
ATOM 19 N6 A A 7 11.838 26.654 36.707 1.00 18.63 N
ATOM 20 N1 A A 7 13.830 27.264 37.702 1.00 17.91 N
ATOM 21 C2 A A 7 14.632 28.231 38.164 1.00 25.49 C
ATOM 22 N3 A A 7 14.435 29.548 38.185 1.00 18.70 N
ATOM 23 C4 A A 7 13.241 29.856 37.649 1.00 16.61 C
ATOM 24 P G A 8 16.146 35.731 38.245 1.00 19.79 P
ATOM 25 OP1 G A 8 15.313 36.931 38.494 1.00 19.56 O
ATOM 26 OP2 G A 8 17.089 35.732 37.099 1.00 28.42 O
ATOM 27 O5' G A 8 16.980 35.324 39.538 1.00 26.13 O
TER

ATOM 1 O3' G B 8 13.761 34.122 42.855 1.00 18.71 O
ATOM 2 P U B 9 12.870 34.589 44.102 1.00 20.14 P
ATOM 3 OP1 U B 9 13.415 35.876 44.608 1.00 22.85 O
ATOM 4 OP2 U B 9 12.713 33.441 45.035 1.00 21.54 O
ATOM 5 O5' U B 9 11.455 34.885 43.447 1.00 20.12 O
ATOM 6 C5' U B 9 11.309 35.890 42.448 1.00 21.44 C
ATOM 7 C4' U B 9 10.176 35.534 41.521 1.00 21.47 C
ATOM 8 O4' U B 9 10.685 34.699 40.446 1.00 17.61 O
ATOM 9 C3' U B 9 9.045 34.723 42.142 1.00 20.84 C
ATOM 10 O3' U B 9 8.080 35.587 42.736 1.00 22.69 O
ATOM 11 C2' U B 9 8.469 34.010 40.929 1.00 22.11 C
ATOM 12 O2' U B 9 7.643 34.868 40.168 1.00 23.16 O
ATOM 13 C1' U B 9 9.738 33.687 40.138 1.00 21.34 C
ATOM 14 N1 U B 9 10.342 32.365 40.397 1.00 18.16 N
ATOM 15 C2 U B 9 9.650 31.235 39.968 1.00 17.86 C
ATOM 16 O2 U B 9 8.558 31.286 39.427 1.00 21.68 O
ATOM 17 N3 U B 9 10.287 30.042 40.201 1.00 16.61 N
ATOM 18 C4 U B 9 11.508 29.850 40.807 1.00 18.43 C
ATOM 19 O4 U B 9 11.945 28.703 40.940 1.00 20.87 O
ATOM 20 C5 U B 9 12.157 31.054 41.234 1.00 15.93 C
ATOM 21 C6 U B 9 11.564 32.240 41.024 1.00 14.77 C
ATOM 22 P A B 10 7.304 35.129 44.072 1.00 23.01 P
ATOM 23 OP1 A B 10 6.561 36.311 44.574 1.00 22.23 O
ATOM 24 OP2 A B 10 8.248 34.424 44.974 1.00 19.43 O
ATOM 25 O5' A B 10 6.242 34.061 43.552 1.00 21.38 O
TER

Atoms:
OP1: (8.873,35.040,36.020)
OP2: (10.492,36.252,34.446)
C3': (14.114,34.482,37.149)
C1': (13.378,32.362,37.818)
C5': (11.672,35.296,37.218)
O4': (12.433,33.279,38.329)
C8: (11.467,30.913,36.910)
O2': (15.200,32.459,36.248)
C6: (12.636,27.612,37.173)
C5: (12.308,28.974,37.138)
C4: (13.241,29.856,37.649)
P: (10.078,35.013,35.163)
C4': (12.818,34.633,37.939)
C2': (13.976,33.065,36.603)
C2: (14.632,28.231,38.164)
N1: (13.830,27.264,37.702)
N3: (14.435,29.548,38.185)
N6: (11.838,26.654,36.707)
N7: (11.190,29.652,36.676)
N9: (12.703,31.109,37.480)
O5': (11.301,34.542,36.065)
O3': (15.184,34.462,38.078)
C4: (11.508,29.850,40.807)
N3: (10.287,30.042,40.201)
OP1: (13.415,35.876,44.608)
OP2: (12.713,33.441,45.035)
C2: (9.650,31.235,39.968)
C1': (9.738,33.687,40.138)
C3': (9.045,34.723,42.142)
O5': (11.455,34.885,43.447)
O4': (10.685,34.699,40.446)
C5': (11.309,35.890,42.448)
P: (12.870,34.589,44.102)
C4': (10.176,35.534,41.521)
C2': (8.469,34.010,40.929)
O2': (7.643,34.868,40.168)
N1: (10.342,32.365,40.397)
O4: (11.945,28.703,40.940)
O2: (8.558,31.286,39.427)
C6: (11.564,32.240,41.024)
C5: (12.157,31.054,41.234)
O3': (8.080,35.587,42.736)
Image (generated by PyMOL):
PyMOL image
show in jmol