ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:0350:0349

Extra

PDB:
ATOM 1 O3' C A 349 51.582 112.685 -1.454 1.00 73.18 O
ATOM 2 P G A 350 52.717 112.314 -2.534 1.00 74.07 P
ATOM 3 OP1 G A 350 52.171 111.237 -3.399 1.00 74.48 O
ATOM 4 OP2 G A 350 54.001 112.091 -1.817 1.00 73.00 O
ATOM 5 O5' G A 350 52.836 113.636 -3.421 1.00 74.46 O
ATOM 6 C5' G A 350 51.725 114.082 -4.234 1.00 74.08 C
ATOM 7 C4' G A 350 52.009 115.447 -4.825 1.00 74.46 C
ATOM 8 O4' G A 350 52.118 116.431 -3.759 1.00 75.40 O
ATOM 9 C3' G A 350 53.322 115.597 -5.576 1.00 74.53 C
ATOM 10 O3' G A 350 53.279 115.085 -6.898 1.00 73.46 O
ATOM 11 C2' G A 350 53.531 117.103 -5.540 1.00 74.46 C
ATOM 12 O2' G A 350 52.706 117.790 -6.462 1.00 73.60 O
ATOM 13 C1' G A 350 53.082 117.418 -4.113 1.00 74.35 C
ATOM 14 N9 G A 350 54.201 117.323 -3.179 1.00 73.19 N
ATOM 15 C8 G A 350 54.466 116.297 -2.302 1.00 72.62 C
ATOM 16 N7 G A 350 55.566 116.474 -1.622 1.00 72.47 N
ATOM 17 C5 G A 350 56.055 117.694 -2.069 1.00 72.77 C
ATOM 18 C6 G A 350 57.228 118.411 -1.696 1.00 72.61 C
ATOM 19 O6 G A 350 58.097 118.096 -0.870 1.00 72.22 O
ATOM 20 N1 G A 350 57.339 119.610 -2.395 1.00 72.01 N
ATOM 21 C2 G A 350 56.439 120.065 -3.332 1.00 72.25 C
ATOM 22 N2 G A 350 56.720 121.253 -3.892 1.00 71.39 N
ATOM 23 N3 G A 350 55.345 119.406 -3.690 1.00 72.03 N
ATOM 24 C4 G A 350 55.218 118.237 -3.024 1.00 72.46 C
ATOM 25 P C A 351 54.619 114.493 -7.555 1.00 72.87 P
ATOM 26 OP1 C A 351 54.269 114.022 -8.914 1.00 73.52 O
ATOM 27 OP2 C A 351 55.238 113.548 -6.590 1.00 73.68 O
ATOM 28 O5' C A 351 55.578 115.759 -7.677 1.00 72.39 O
TER

ATOM 1 O3' A B 348 53.569 112.734 4.330 1.00 66.60 O
ATOM 2 P C B 349 54.337 112.480 2.946 1.00 68.84 P
ATOM 3 OP1 C B 349 54.452 111.015 2.755 1.00 69.43 O
ATOM 4 OP2 C B 349 55.560 113.319 2.949 1.00 68.73 O
ATOM 5 O5' C B 349 53.341 113.052 1.844 1.00 69.04 O
ATOM 6 C5' C B 349 51.995 112.557 1.737 1.00 70.48 C
ATOM 7 C4' C B 349 51.185 113.454 0.835 1.00 71.74 C
ATOM 8 O4' C B 349 51.063 114.768 1.447 1.00 71.67 O
ATOM 9 C3' C B 349 51.816 113.734 -0.519 1.00 72.70 C
ATOM 10 O3' C B 349 51.582 112.685 -1.454 1.00 73.18 O
ATOM 11 C2' C B 349 51.159 115.052 -0.908 1.00 72.69 C
ATOM 12 O2' C B 349 49.835 114.885 -1.371 1.00 72.16 O
ATOM 13 C1' C B 349 51.133 115.772 0.443 1.00 72.71 C
ATOM 14 N1 C B 349 52.351 116.568 0.678 1.00 72.87 N
ATOM 15 C2 C B 349 52.379 117.904 0.266 1.00 72.70 C
ATOM 16 O2 C B 349 51.374 118.387 -0.277 1.00 72.29 O
ATOM 17 N3 C B 349 53.502 118.636 0.472 1.00 72.87 N
ATOM 18 C4 C B 349 54.563 118.078 1.065 1.00 72.80 C
ATOM 19 N4 C B 349 55.652 118.831 1.249 1.00 72.62 N
ATOM 20 C5 C B 349 54.557 116.721 1.496 1.00 72.78 C
ATOM 21 C6 C B 349 53.442 116.010 1.286 1.00 73.07 C
ATOM 22 P G B 350 52.717 112.314 -2.534 1.00 74.07 P
ATOM 23 OP1 G B 350 52.171 111.237 -3.399 1.00 74.48 O
ATOM 24 OP2 G B 350 54.001 112.091 -1.817 1.00 73.00 O
ATOM 25 O5' G B 350 52.836 113.636 -3.421 1.00 74.46 O
TER

Atoms:
OP1: (52.171,111.237,-3.399)
OP2: (54.001,112.091,-1.817)
C3': (53.322,115.597,-5.576)
C1': (53.082,117.418,-4.113)
C5': (51.725,114.082,-4.234)
O6: (58.097,118.096,-0.870)
O4': (52.118,116.431,-3.759)
C8: (54.466,116.297,-2.302)
C2: (56.439,120.065,-3.332)
C6: (57.228,118.411,-1.696)
C5: (56.055,117.694,-2.069)
C4: (55.218,118.237,-3.024)
P: (52.717,112.314,-2.534)
C4': (52.009,115.447,-4.825)
C2': (53.531,117.103,-5.540)
O2': (52.706,117.790,-6.462)
N1: (57.339,119.610,-2.395)
N2: (56.720,121.253,-3.892)
N3: (55.345,119.406,-3.690)
N7: (55.566,116.474,-1.622)
N9: (54.201,117.323,-3.179)
O5': (52.836,113.636,-3.421)
O3': (53.279,115.085,-6.898)
C2: (52.379,117.904,0.266)
OP1: (54.452,111.015,2.755)
OP2: (55.560,113.319,2.949)
C4: (54.563,118.078,1.065)
O5': (53.341,113.052,1.844)
C3': (51.816,113.734,-0.519)
C1': (51.133,115.772,0.443)
O4': (51.063,114.768,1.447)
C5': (51.995,112.557,1.737)
P: (54.337,112.480,2.946)
O2: (51.374,118.387,-0.277)
C4': (51.185,113.454,0.835)
C2': (51.159,115.052,-0.908)
O2': (49.835,114.885,-1.371)
N1: (52.351,116.568,0.678)
N3: (53.502,118.636,0.472)
N4: (55.652,118.831,1.249)
C6: (53.442,116.010,1.286)
C5: (54.557,116.721,1.496)
O3': (51.582,112.685,-1.454)
Image (generated by PyMOL):
PyMOL image
show in jmol