Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0575:0577
Extra
PDB:
ATOM 1 O3' C A 574 -13.771 89.649 114.541 1.00 68.33 O
ATOM 2 P A A 575 -13.502 90.224 113.069 1.00 69.26 P
ATOM 3 OP1 A A 575 -13.035 91.632 113.210 1.00 69.03 O
ATOM 4 OP2 A A 575 -14.697 89.927 112.238 1.00 67.71 O
ATOM 5 O5' A A 575 -12.302 89.329 112.526 1.00 68.86 O
ATOM 6 C5' A A 575 -12.111 89.165 111.118 1.00 69.53 C
ATOM 7 C4' A A 575 -10.659 88.913 110.799 1.00 68.85 C
ATOM 8 O4' A A 575 -9.852 90.027 111.268 1.00 69.09 O
ATOM 9 C3' A A 575 -10.029 87.658 111.381 1.00 68.32 C
ATOM 10 O3' A A 575 -9.132 87.153 110.413 1.00 68.72 O
ATOM 11 C2' A A 575 -9.257 88.186 112.586 1.00 68.20 C
ATOM 12 O2' A A 575 -8.134 87.384 112.896 1.00 68.35 O
ATOM 13 C1' A A 575 -8.797 89.543 112.070 1.00 67.99 C
ATOM 14 N9 A A 575 -8.513 90.534 113.109 1.00 67.59 N
ATOM 15 C8 A A 575 -9.400 91.270 113.860 1.00 67.03 C
ATOM 16 N7 A A 575 -8.822 92.111 114.686 1.00 66.65 N
ATOM 17 C5 A A 575 -7.464 91.909 114.472 1.00 66.38 C
ATOM 18 C6 A A 575 -6.316 92.498 115.035 1.00 65.80 C
ATOM 19 N6 A A 575 -6.350 93.458 115.964 1.00 65.67 N
ATOM 20 N1 A A 575 -5.113 92.064 114.602 1.00 64.94 N
ATOM 21 C2 A A 575 -5.074 91.108 113.667 1.00 64.57 C
ATOM 22 N3 A A 575 -6.076 90.481 113.061 1.00 65.15 N
ATOM 23 C4 A A 575 -7.260 90.933 113.512 1.00 66.65 C
ATOM 24 P G A 576 -9.436 85.741 109.720 1.00 70.70 P
ATOM 25 OP1 G A 576 -10.914 85.579 109.673 1.00 70.82 O
ATOM 26 OP2 G A 576 -8.600 84.719 110.405 1.00 70.22 O
ATOM 27 O5' G A 576 -8.910 85.923 108.228 1.00 69.18 O
TER
ATOM 1 O3' G B 576 -8.141 89.795 106.648 1.00 62.82 O
ATOM 2 P U B 577 -8.396 90.789 105.410 1.00 64.55 P
ATOM 3 OP1 U B 577 -9.022 90.027 104.294 1.00 62.24 O
ATOM 4 OP2 U B 577 -7.155 91.567 105.162 1.00 63.91 O
ATOM 5 O5' U B 577 -9.465 91.807 106.003 1.00 62.90 O
ATOM 6 C5' U B 577 -10.764 91.349 106.422 1.00 62.33 C
ATOM 7 C4' U B 577 -11.173 92.033 107.701 1.00 60.96 C
ATOM 8 O4' U B 577 -10.389 91.526 108.805 1.00 60.27 O
ATOM 9 C3' U B 577 -10.932 93.529 107.731 1.00 62.12 C
ATOM 10 O3' U B 577 -11.984 94.212 107.053 1.00 64.55 O
ATOM 11 C2' U B 577 -10.869 93.824 109.228 1.00 60.92 C
ATOM 12 O2' U B 577 -12.142 93.967 109.827 1.00 60.77 O
ATOM 13 C1' U B 577 -10.197 92.553 109.765 1.00 58.99 C
ATOM 14 N1 U B 577 -8.759 92.640 110.078 1.00 57.10 N
ATOM 15 C2 U B 577 -8.337 93.600 110.991 1.00 56.35 C
ATOM 16 O2 U B 577 -9.096 94.376 111.545 1.00 55.59 O
ATOM 17 N3 U B 577 -6.985 93.614 111.230 1.00 56.08 N
ATOM 18 C4 U B 577 -6.028 92.789 110.671 1.00 56.26 C
ATOM 19 O4 U B 577 -4.845 92.943 110.977 1.00 56.61 O
ATOM 20 C5 U B 577 -6.537 91.825 109.746 1.00 55.34 C
ATOM 21 C6 U B 577 -7.847 91.784 109.485 1.00 56.49 C
ATOM 22 P A B 578 -11.646 95.475 106.118 1.00 65.96 P
ATOM 23 OP1 A B 578 -12.887 95.845 105.390 1.00 66.30 O
ATOM 24 OP2 A B 578 -10.406 95.184 105.348 1.00 65.68 O
ATOM 25 O5' A B 578 -11.337 96.626 107.172 1.00 63.77 O
TER
ATOM 2 P A A 575 -13.502 90.224 113.069 1.00 69.26 P
ATOM 3 OP1 A A 575 -13.035 91.632 113.210 1.00 69.03 O
ATOM 4 OP2 A A 575 -14.697 89.927 112.238 1.00 67.71 O
ATOM 5 O5' A A 575 -12.302 89.329 112.526 1.00 68.86 O
ATOM 6 C5' A A 575 -12.111 89.165 111.118 1.00 69.53 C
ATOM 7 C4' A A 575 -10.659 88.913 110.799 1.00 68.85 C
ATOM 8 O4' A A 575 -9.852 90.027 111.268 1.00 69.09 O
ATOM 9 C3' A A 575 -10.029 87.658 111.381 1.00 68.32 C
ATOM 10 O3' A A 575 -9.132 87.153 110.413 1.00 68.72 O
ATOM 11 C2' A A 575 -9.257 88.186 112.586 1.00 68.20 C
ATOM 12 O2' A A 575 -8.134 87.384 112.896 1.00 68.35 O
ATOM 13 C1' A A 575 -8.797 89.543 112.070 1.00 67.99 C
ATOM 14 N9 A A 575 -8.513 90.534 113.109 1.00 67.59 N
ATOM 15 C8 A A 575 -9.400 91.270 113.860 1.00 67.03 C
ATOM 16 N7 A A 575 -8.822 92.111 114.686 1.00 66.65 N
ATOM 17 C5 A A 575 -7.464 91.909 114.472 1.00 66.38 C
ATOM 18 C6 A A 575 -6.316 92.498 115.035 1.00 65.80 C
ATOM 19 N6 A A 575 -6.350 93.458 115.964 1.00 65.67 N
ATOM 20 N1 A A 575 -5.113 92.064 114.602 1.00 64.94 N
ATOM 21 C2 A A 575 -5.074 91.108 113.667 1.00 64.57 C
ATOM 22 N3 A A 575 -6.076 90.481 113.061 1.00 65.15 N
ATOM 23 C4 A A 575 -7.260 90.933 113.512 1.00 66.65 C
ATOM 24 P G A 576 -9.436 85.741 109.720 1.00 70.70 P
ATOM 25 OP1 G A 576 -10.914 85.579 109.673 1.00 70.82 O
ATOM 26 OP2 G A 576 -8.600 84.719 110.405 1.00 70.22 O
ATOM 27 O5' G A 576 -8.910 85.923 108.228 1.00 69.18 O
TER
ATOM 1 O3' G B 576 -8.141 89.795 106.648 1.00 62.82 O
ATOM 2 P U B 577 -8.396 90.789 105.410 1.00 64.55 P
ATOM 3 OP1 U B 577 -9.022 90.027 104.294 1.00 62.24 O
ATOM 4 OP2 U B 577 -7.155 91.567 105.162 1.00 63.91 O
ATOM 5 O5' U B 577 -9.465 91.807 106.003 1.00 62.90 O
ATOM 6 C5' U B 577 -10.764 91.349 106.422 1.00 62.33 C
ATOM 7 C4' U B 577 -11.173 92.033 107.701 1.00 60.96 C
ATOM 8 O4' U B 577 -10.389 91.526 108.805 1.00 60.27 O
ATOM 9 C3' U B 577 -10.932 93.529 107.731 1.00 62.12 C
ATOM 10 O3' U B 577 -11.984 94.212 107.053 1.00 64.55 O
ATOM 11 C2' U B 577 -10.869 93.824 109.228 1.00 60.92 C
ATOM 12 O2' U B 577 -12.142 93.967 109.827 1.00 60.77 O
ATOM 13 C1' U B 577 -10.197 92.553 109.765 1.00 58.99 C
ATOM 14 N1 U B 577 -8.759 92.640 110.078 1.00 57.10 N
ATOM 15 C2 U B 577 -8.337 93.600 110.991 1.00 56.35 C
ATOM 16 O2 U B 577 -9.096 94.376 111.545 1.00 55.59 O
ATOM 17 N3 U B 577 -6.985 93.614 111.230 1.00 56.08 N
ATOM 18 C4 U B 577 -6.028 92.789 110.671 1.00 56.26 C
ATOM 19 O4 U B 577 -4.845 92.943 110.977 1.00 56.61 O
ATOM 20 C5 U B 577 -6.537 91.825 109.746 1.00 55.34 C
ATOM 21 C6 U B 577 -7.847 91.784 109.485 1.00 56.49 C
ATOM 22 P A B 578 -11.646 95.475 106.118 1.00 65.96 P
ATOM 23 OP1 A B 578 -12.887 95.845 105.390 1.00 66.30 O
ATOM 24 OP2 A B 578 -10.406 95.184 105.348 1.00 65.68 O
ATOM 25 O5' A B 578 -11.337 96.626 107.172 1.00 63.77 O
TER
Atoms:
OP1: (-13.035,91.632,113.210)
OP2: (-14.697,89.927,112.238)
C3': (-10.029,87.658,111.381)
C1': (-8.797,89.543,112.070)
C5': (-12.111,89.165,111.118)
O4': (-9.852,90.027,111.268)
C8: (-9.400,91.270,113.860)
O2': (-8.134,87.384,112.896)
C6: (-6.316,92.498,115.035)
C5: (-7.464,91.909,114.472)
C4: (-7.260,90.933,113.512)
P: (-13.502,90.224,113.069)
C4': (-10.659,88.913,110.799)
C2': (-9.257,88.186,112.586)
C2: (-5.074,91.108,113.667)
N1: (-5.113,92.064,114.602)
N3: (-6.076,90.481,113.061)
N6: (-6.350,93.458,115.964)
N7: (-8.822,92.111,114.686)
N9: (-8.513,90.534,113.109)
O5': (-12.302,89.329,112.526)
O3': (-9.132,87.153,110.413)
OP2: (-14.697,89.927,112.238)
C3': (-10.029,87.658,111.381)
C1': (-8.797,89.543,112.070)
C5': (-12.111,89.165,111.118)
O4': (-9.852,90.027,111.268)
C8: (-9.400,91.270,113.860)
O2': (-8.134,87.384,112.896)
C6: (-6.316,92.498,115.035)
C5: (-7.464,91.909,114.472)
C4: (-7.260,90.933,113.512)
P: (-13.502,90.224,113.069)
C4': (-10.659,88.913,110.799)
C2': (-9.257,88.186,112.586)
C2: (-5.074,91.108,113.667)
N1: (-5.113,92.064,114.602)
N3: (-6.076,90.481,113.061)
N6: (-6.350,93.458,115.964)
N7: (-8.822,92.111,114.686)
N9: (-8.513,90.534,113.109)
O5': (-12.302,89.329,112.526)
O3': (-9.132,87.153,110.413)
C4: (-6.028,92.789,110.671)
N3: (-6.985,93.614,111.230)
OP1: (-9.022,90.027,104.294)
OP2: (-7.155,91.567,105.162)
C2: (-8.337,93.600,110.991)
C1': (-10.197,92.553,109.765)
C3': (-10.932,93.529,107.731)
O5': (-9.465,91.807,106.003)
O4': (-10.389,91.526,108.805)
C5': (-10.764,91.349,106.422)
P: (-8.396,90.789,105.410)
C4': (-11.173,92.033,107.701)
C2': (-10.869,93.824,109.228)
O2': (-12.142,93.967,109.827)
N1: (-8.759,92.640,110.078)
O4: (-4.845,92.943,110.977)
O2: (-9.096,94.376,111.545)
C6: (-7.847,91.784,109.485)
C5: (-6.537,91.825,109.746)
O3': (-11.984,94.212,107.053)
N3: (-6.985,93.614,111.230)
OP1: (-9.022,90.027,104.294)
OP2: (-7.155,91.567,105.162)
C2: (-8.337,93.600,110.991)
C1': (-10.197,92.553,109.765)
C3': (-10.932,93.529,107.731)
O5': (-9.465,91.807,106.003)
O4': (-10.389,91.526,108.805)
C5': (-10.764,91.349,106.422)
P: (-8.396,90.789,105.410)
C4': (-11.173,92.033,107.701)
C2': (-10.869,93.824,109.228)
O2': (-12.142,93.967,109.827)
N1: (-8.759,92.640,110.078)
O4: (-4.845,92.943,110.977)
O2: (-9.096,94.376,111.545)
C6: (-7.847,91.784,109.485)
C5: (-6.537,91.825,109.746)
O3': (-11.984,94.212,107.053)
Image (generated by PyMOL):