Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0345:0347
Extra
PDB:
ATOM 1 O3' C A 344 53.509 120.951 15.496 1.00 82.47 O
ATOM 2 P A A 345 54.531 120.481 14.342 1.00 84.50 P
ATOM 3 OP1 A A 345 53.742 120.183 13.111 1.00 84.55 O
ATOM 4 OP2 A A 345 55.435 119.443 14.912 1.00 83.34 O
ATOM 5 O5' A A 345 55.409 121.769 14.047 1.00 84.33 O
ATOM 6 C5' A A 345 56.471 121.731 13.083 1.00 85.31 C
ATOM 7 C4' A A 345 56.504 123.022 12.315 1.00 86.05 C
ATOM 8 O4' A A 345 55.454 123.023 11.304 1.00 86.79 O
ATOM 9 C3' A A 345 56.270 124.261 13.172 1.00 86.61 C
ATOM 10 O3' A A 345 57.053 125.323 12.662 1.00 88.44 O
ATOM 11 C2' A A 345 54.783 124.531 12.953 1.00 86.72 C
ATOM 12 O2' A A 345 54.394 125.868 13.195 1.00 87.09 O
ATOM 13 C1' A A 345 54.640 124.166 11.478 1.00 86.37 C
ATOM 14 N9 A A 345 53.277 123.862 11.037 1.00 85.88 N
ATOM 15 C8 A A 345 52.512 122.742 11.277 1.00 85.40 C
ATOM 16 N7 A A 345 51.311 122.798 10.750 1.00 84.88 N
ATOM 17 C5 A A 345 51.279 124.036 10.116 1.00 85.84 C
ATOM 18 C6 A A 345 50.273 124.709 9.377 1.00 85.07 C
ATOM 19 N6 A A 345 49.054 124.209 9.150 1.00 84.40 N
ATOM 20 N1 A A 345 50.570 125.931 8.878 1.00 84.75 N
ATOM 21 C2 A A 345 51.793 126.440 9.108 1.00 85.63 C
ATOM 22 N3 A A 345 52.817 125.912 9.787 1.00 85.89 N
ATOM 23 C4 A A 345 52.490 124.697 10.274 1.00 86.41 C
ATOM 24 P G A 346 58.449 125.686 13.365 1.00 90.36 P
ATOM 25 OP1 G A 346 58.807 124.564 14.264 1.00 91.34 O
ATOM 26 OP2 G A 346 58.342 127.063 13.913 1.00 91.13 O
ATOM 27 O5' G A 346 59.488 125.693 12.155 1.00 92.04 O
TER
ATOM 1 O3' G B 346 59.426 123.559 8.583 1.00 96.32 O
ATOM 2 P U B 347 60.440 122.410 8.066 1.00 97.26 P
ATOM 3 OP1 U B 347 61.624 122.323 8.970 1.00 97.54 O
ATOM 4 OP2 U B 347 60.646 122.626 6.607 1.00 97.15 O
ATOM 5 O5' U B 347 59.586 121.068 8.210 1.00 96.15 O
ATOM 6 C5' U B 347 59.584 120.296 9.436 1.00 93.57 C
ATOM 7 C4' U B 347 58.202 119.738 9.701 1.00 92.42 C
ATOM 8 O4' U B 347 57.293 120.835 9.960 1.00 91.63 O
ATOM 9 C3' U B 347 57.551 118.983 8.550 1.00 92.80 C
ATOM 10 O3' U B 347 58.001 117.625 8.528 1.00 94.80 O
ATOM 11 C2' U B 347 56.060 119.102 8.866 1.00 91.12 C
ATOM 12 O2' U B 347 55.589 118.158 9.804 1.00 91.30 O
ATOM 13 C1' U B 347 55.993 120.479 9.531 1.00 90.22 C
ATOM 14 N1 U B 347 55.431 121.578 8.734 1.00 89.17 N
ATOM 15 C2 U B 347 54.070 121.538 8.458 1.00 88.85 C
ATOM 16 O2 U B 347 53.345 120.613 8.805 1.00 88.37 O
ATOM 17 N3 U B 347 53.590 122.622 7.764 1.00 88.64 N
ATOM 18 C4 U B 347 54.312 123.718 7.324 1.00 88.42 C
ATOM 19 O4 U B 347 53.716 124.658 6.792 1.00 88.52 O
ATOM 20 C5 U B 347 55.715 123.672 7.623 1.00 87.93 C
ATOM 21 C6 U B 347 56.214 122.630 8.295 1.00 88.09 C
ATOM 22 P A B 348 58.071 116.814 7.135 1.00 95.82 P
ATOM 23 OP1 A B 348 58.655 115.478 7.461 1.00 94.74 O
ATOM 24 OP2 A B 348 58.720 117.666 6.101 1.00 94.67 O
ATOM 25 O5' A B 348 56.539 116.619 6.729 1.00 95.25 O
TER
ATOM 2 P A A 345 54.531 120.481 14.342 1.00 84.50 P
ATOM 3 OP1 A A 345 53.742 120.183 13.111 1.00 84.55 O
ATOM 4 OP2 A A 345 55.435 119.443 14.912 1.00 83.34 O
ATOM 5 O5' A A 345 55.409 121.769 14.047 1.00 84.33 O
ATOM 6 C5' A A 345 56.471 121.731 13.083 1.00 85.31 C
ATOM 7 C4' A A 345 56.504 123.022 12.315 1.00 86.05 C
ATOM 8 O4' A A 345 55.454 123.023 11.304 1.00 86.79 O
ATOM 9 C3' A A 345 56.270 124.261 13.172 1.00 86.61 C
ATOM 10 O3' A A 345 57.053 125.323 12.662 1.00 88.44 O
ATOM 11 C2' A A 345 54.783 124.531 12.953 1.00 86.72 C
ATOM 12 O2' A A 345 54.394 125.868 13.195 1.00 87.09 O
ATOM 13 C1' A A 345 54.640 124.166 11.478 1.00 86.37 C
ATOM 14 N9 A A 345 53.277 123.862 11.037 1.00 85.88 N
ATOM 15 C8 A A 345 52.512 122.742 11.277 1.00 85.40 C
ATOM 16 N7 A A 345 51.311 122.798 10.750 1.00 84.88 N
ATOM 17 C5 A A 345 51.279 124.036 10.116 1.00 85.84 C
ATOM 18 C6 A A 345 50.273 124.709 9.377 1.00 85.07 C
ATOM 19 N6 A A 345 49.054 124.209 9.150 1.00 84.40 N
ATOM 20 N1 A A 345 50.570 125.931 8.878 1.00 84.75 N
ATOM 21 C2 A A 345 51.793 126.440 9.108 1.00 85.63 C
ATOM 22 N3 A A 345 52.817 125.912 9.787 1.00 85.89 N
ATOM 23 C4 A A 345 52.490 124.697 10.274 1.00 86.41 C
ATOM 24 P G A 346 58.449 125.686 13.365 1.00 90.36 P
ATOM 25 OP1 G A 346 58.807 124.564 14.264 1.00 91.34 O
ATOM 26 OP2 G A 346 58.342 127.063 13.913 1.00 91.13 O
ATOM 27 O5' G A 346 59.488 125.693 12.155 1.00 92.04 O
TER
ATOM 1 O3' G B 346 59.426 123.559 8.583 1.00 96.32 O
ATOM 2 P U B 347 60.440 122.410 8.066 1.00 97.26 P
ATOM 3 OP1 U B 347 61.624 122.323 8.970 1.00 97.54 O
ATOM 4 OP2 U B 347 60.646 122.626 6.607 1.00 97.15 O
ATOM 5 O5' U B 347 59.586 121.068 8.210 1.00 96.15 O
ATOM 6 C5' U B 347 59.584 120.296 9.436 1.00 93.57 C
ATOM 7 C4' U B 347 58.202 119.738 9.701 1.00 92.42 C
ATOM 8 O4' U B 347 57.293 120.835 9.960 1.00 91.63 O
ATOM 9 C3' U B 347 57.551 118.983 8.550 1.00 92.80 C
ATOM 10 O3' U B 347 58.001 117.625 8.528 1.00 94.80 O
ATOM 11 C2' U B 347 56.060 119.102 8.866 1.00 91.12 C
ATOM 12 O2' U B 347 55.589 118.158 9.804 1.00 91.30 O
ATOM 13 C1' U B 347 55.993 120.479 9.531 1.00 90.22 C
ATOM 14 N1 U B 347 55.431 121.578 8.734 1.00 89.17 N
ATOM 15 C2 U B 347 54.070 121.538 8.458 1.00 88.85 C
ATOM 16 O2 U B 347 53.345 120.613 8.805 1.00 88.37 O
ATOM 17 N3 U B 347 53.590 122.622 7.764 1.00 88.64 N
ATOM 18 C4 U B 347 54.312 123.718 7.324 1.00 88.42 C
ATOM 19 O4 U B 347 53.716 124.658 6.792 1.00 88.52 O
ATOM 20 C5 U B 347 55.715 123.672 7.623 1.00 87.93 C
ATOM 21 C6 U B 347 56.214 122.630 8.295 1.00 88.09 C
ATOM 22 P A B 348 58.071 116.814 7.135 1.00 95.82 P
ATOM 23 OP1 A B 348 58.655 115.478 7.461 1.00 94.74 O
ATOM 24 OP2 A B 348 58.720 117.666 6.101 1.00 94.67 O
ATOM 25 O5' A B 348 56.539 116.619 6.729 1.00 95.25 O
TER
Atoms:
OP1: (53.742,120.183,13.111)
OP2: (55.435,119.443,14.912)
C3': (56.270,124.261,13.172)
C1': (54.640,124.166,11.478)
C5': (56.471,121.731,13.083)
O4': (55.454,123.023,11.304)
C8: (52.512,122.742,11.277)
O2': (54.394,125.868,13.195)
C6: (50.273,124.709,9.377)
C5: (51.279,124.036,10.116)
C4: (52.490,124.697,10.274)
P: (54.531,120.481,14.342)
C4': (56.504,123.022,12.315)
C2': (54.783,124.531,12.953)
C2: (51.793,126.440,9.108)
N1: (50.570,125.931,8.878)
N3: (52.817,125.912,9.787)
N6: (49.054,124.209,9.150)
N7: (51.311,122.798,10.750)
N9: (53.277,123.862,11.037)
O5': (55.409,121.769,14.047)
O3': (57.053,125.323,12.662)
OP2: (55.435,119.443,14.912)
C3': (56.270,124.261,13.172)
C1': (54.640,124.166,11.478)
C5': (56.471,121.731,13.083)
O4': (55.454,123.023,11.304)
C8: (52.512,122.742,11.277)
O2': (54.394,125.868,13.195)
C6: (50.273,124.709,9.377)
C5: (51.279,124.036,10.116)
C4: (52.490,124.697,10.274)
P: (54.531,120.481,14.342)
C4': (56.504,123.022,12.315)
C2': (54.783,124.531,12.953)
C2: (51.793,126.440,9.108)
N1: (50.570,125.931,8.878)
N3: (52.817,125.912,9.787)
N6: (49.054,124.209,9.150)
N7: (51.311,122.798,10.750)
N9: (53.277,123.862,11.037)
O5': (55.409,121.769,14.047)
O3': (57.053,125.323,12.662)
C4: (54.312,123.718,7.324)
N3: (53.590,122.622,7.764)
OP1: (61.624,122.323,8.970)
OP2: (60.646,122.626,6.607)
C2: (54.070,121.538,8.458)
C1': (55.993,120.479,9.531)
C3': (57.551,118.983,8.550)
O5': (59.586,121.068,8.210)
O4': (57.293,120.835,9.960)
C5': (59.584,120.296,9.436)
P: (60.440,122.410,8.066)
C4': (58.202,119.738,9.701)
C2': (56.060,119.102,8.866)
O2': (55.589,118.158,9.804)
N1: (55.431,121.578,8.734)
O4: (53.716,124.658,6.792)
O2: (53.345,120.613,8.805)
C6: (56.214,122.630,8.295)
C5: (55.715,123.672,7.623)
O3': (58.001,117.625,8.528)
N3: (53.590,122.622,7.764)
OP1: (61.624,122.323,8.970)
OP2: (60.646,122.626,6.607)
C2: (54.070,121.538,8.458)
C1': (55.993,120.479,9.531)
C3': (57.551,118.983,8.550)
O5': (59.586,121.068,8.210)
O4': (57.293,120.835,9.960)
C5': (59.584,120.296,9.436)
P: (60.440,122.410,8.066)
C4': (58.202,119.738,9.701)
C2': (56.060,119.102,8.866)
O2': (55.589,118.158,9.804)
N1: (55.431,121.578,8.734)
O4: (53.716,124.658,6.792)
O2: (53.345,120.613,8.805)
C6: (56.214,122.630,8.295)
C5: (55.715,123.672,7.623)
O3': (58.001,117.625,8.528)
Image (generated by PyMOL):