ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QA4:0235:0253

Extra

PDB:
ATOM 1 O3' G A 234 94.611 118.811 -7.136 1.00 92.01 O
ATOM 2 P A A 235 95.497 119.878 -7.945 1.00 91.87 P
ATOM 3 OP1 A A 235 95.527 119.435 -9.354 1.00 92.02 O
ATOM 4 OP2 A A 235 96.781 120.067 -7.208 1.00 91.58 O
ATOM 5 O5' A A 235 94.647 121.221 -7.866 1.00 90.95 O
ATOM 6 C5' A A 235 93.292 121.269 -8.347 1.00 90.03 C
ATOM 7 C4' A A 235 92.522 122.316 -7.589 1.00 90.13 C
ATOM 8 O4' A A 235 92.479 121.933 -6.188 1.00 90.82 O
ATOM 9 C3' A A 235 93.136 123.711 -7.612 1.00 90.24 C
ATOM 10 O3' A A 235 92.094 124.666 -7.490 1.00 90.84 O
ATOM 11 C2' A A 235 93.971 123.732 -6.338 1.00 90.23 C
ATOM 12 O2' A A 235 94.175 125.044 -5.858 1.00 89.63 O
ATOM 13 C1' A A 235 93.061 122.951 -5.396 1.00 90.65 C
ATOM 14 N9 A A 235 93.705 122.328 -4.237 1.00 90.70 N
ATOM 15 C8 A A 235 94.567 121.259 -4.212 1.00 90.60 C
ATOM 16 N7 A A 235 94.936 120.904 -3.005 1.00 90.41 N
ATOM 17 C5 A A 235 94.283 121.806 -2.176 1.00 90.23 C
ATOM 18 C6 A A 235 94.255 121.958 -0.776 1.00 89.71 C
ATOM 19 N6 A A 235 94.913 121.168 0.071 1.00 88.55 N
ATOM 20 N1 A A 235 93.508 122.961 -0.270 1.00 90.99 N
ATOM 21 C2 A A 235 92.832 123.749 -1.118 1.00 91.70 C
ATOM 22 N3 A A 235 92.771 123.702 -2.448 1.00 91.52 N
ATOM 23 C4 A A 235 93.530 122.696 -2.922 1.00 90.96 C
ATOM 24 P A A 236 91.595 125.463 -8.787 1.00 91.38 P
ATOM 25 OP1 A A 236 92.671 125.345 -9.805 1.00 92.01 O
ATOM 26 OP2 A A 236 91.125 126.805 -8.352 1.00 91.00 O
ATOM 27 O5' A A 236 90.327 124.645 -9.296 1.00 89.99 O
TER

ATOM 1 O3' G B 252 92.212 120.372 4.063 1.00 64.93 O
ATOM 2 P U B 253 90.943 120.367 5.028 1.00 61.15 P
ATOM 3 OP1 U B 253 91.479 120.902 6.300 1.00 59.42 O
ATOM 4 OP2 U B 253 90.339 119.015 4.999 1.00 61.45 O
ATOM 5 O5' U B 253 89.935 121.378 4.323 1.00 61.06 O
ATOM 6 C5' U B 253 89.852 122.760 4.713 1.00 61.62 C
ATOM 7 C4' U B 253 89.263 123.572 3.586 1.00 63.17 C
ATOM 8 O4' U B 253 90.288 123.826 2.593 1.00 63.40 O
ATOM 9 C3' U B 253 88.150 122.876 2.820 1.00 64.61 C
ATOM 10 O3' U B 253 86.871 123.031 3.414 1.00 66.40 O
ATOM 11 C2' U B 253 88.224 123.532 1.450 1.00 64.69 C
ATOM 12 O2' U B 253 87.564 124.785 1.404 1.00 65.54 O
ATOM 13 C1' U B 253 89.737 123.705 1.288 1.00 63.96 C
ATOM 14 N1 U B 253 90.375 122.545 0.655 1.00 63.09 N
ATOM 15 C2 U B 253 90.266 122.388 -0.715 1.00 62.15 C
ATOM 16 O2 U B 253 89.685 123.176 -1.441 1.00 60.81 O
ATOM 17 N3 U B 253 90.875 121.266 -1.205 1.00 63.09 N
ATOM 18 C4 U B 253 91.572 120.311 -0.486 1.00 64.27 C
ATOM 19 O4 U B 253 92.019 119.321 -1.070 1.00 66.01 O
ATOM 20 C5 U B 253 91.651 120.557 0.915 1.00 63.50 C
ATOM 21 C6 U B 253 91.064 121.634 1.424 1.00 63.45 C
ATOM 22 P G B 254 85.793 121.845 3.282 1.00 69.45 P
ATOM 23 OP1 G B 254 84.475 122.451 3.625 1.00 67.70 O
ATOM 24 OP2 G B 254 86.284 120.650 4.035 1.00 67.16 O
ATOM 25 O5' G B 254 85.806 121.471 1.728 1.00 70.46 O
TER

Atoms:
OP1: (95.527,119.435,-9.354)
OP2: (96.781,120.067,-7.208)
C3': (93.136,123.711,-7.612)
C1': (93.061,122.951,-5.396)
C5': (93.292,121.269,-8.347)
O4': (92.479,121.933,-6.188)
C8: (94.567,121.259,-4.212)
O2': (94.175,125.044,-5.858)
C6: (94.255,121.958,-0.776)
C5: (94.283,121.806,-2.176)
C4: (93.530,122.696,-2.922)
P: (95.497,119.878,-7.945)
C4': (92.522,122.316,-7.589)
C2': (93.971,123.732,-6.338)
C2: (92.832,123.749,-1.118)
N1: (93.508,122.961,-0.270)
N3: (92.771,123.702,-2.448)
N6: (94.913,121.168,0.071)
N7: (94.936,120.904,-3.005)
N9: (93.705,122.328,-4.237)
O5': (94.647,121.221,-7.866)
O3': (92.094,124.666,-7.490)
C4: (91.572,120.311,-0.486)
N3: (90.875,121.266,-1.205)
OP1: (91.479,120.902,6.300)
OP2: (90.339,119.015,4.999)
C2: (90.266,122.388,-0.715)
C1': (89.737,123.705,1.288)
C3': (88.150,122.876,2.820)
O5': (89.935,121.378,4.323)
O4': (90.288,123.826,2.593)
C5': (89.852,122.760,4.713)
P: (90.943,120.367,5.028)
C4': (89.263,123.572,3.586)
C2': (88.224,123.532,1.450)
O2': (87.564,124.785,1.404)
N1: (90.375,122.545,0.655)
O4: (92.019,119.321,-1.070)
O2: (89.685,123.176,-1.441)
C6: (91.064,121.634,1.424)
C5: (91.651,120.557,0.915)
O3': (86.871,123.031,3.414)
Image (generated by PyMOL):
PyMOL image
show in jmol