Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02042:02380
Extra
PDB:
ATOM 1 O3' A A2041 49.050 125.987 101.065 1.00 22.72 O
ATOM 2 P A A2042 49.738 125.625 99.657 1.00 25.07 P
ATOM 3 OP1 A A2042 49.762 126.839 98.798 1.00 25.66 O
ATOM 4 OP2 A A2042 49.054 124.400 99.175 1.00 23.89 O
ATOM 5 O5' A A2042 51.220 125.204 100.052 1.00 23.47 O
ATOM 6 C5' A A2042 51.450 123.971 100.746 1.00 23.47 C
ATOM 7 C4' A A2042 52.488 124.153 101.823 1.00 21.55 C
ATOM 8 O4' A A2042 52.581 122.926 102.581 1.00 19.47 O
ATOM 9 C3' A A2042 53.883 124.451 101.299 1.00 20.79 C
ATOM 10 O3' A A2042 54.043 125.862 101.330 1.00 23.20 O
ATOM 11 C2' A A2042 54.802 123.779 102.316 1.00 21.64 C
ATOM 12 O2' A A2042 55.153 124.632 103.384 1.00 20.30 O
ATOM 13 C1' A A2042 53.934 122.612 102.814 1.00 19.51 C
ATOM 14 N9 A A2042 54.173 121.300 102.225 1.00 18.70 N
ATOM 15 C8 A A2042 54.498 120.149 102.891 1.00 18.67 C
ATOM 16 N7 A A2042 54.617 119.104 102.112 1.00 20.25 N
ATOM 17 C5 A A2042 54.361 119.604 100.843 1.00 19.17 C
ATOM 18 C6 A A2042 54.325 118.995 99.577 1.00 21.04 C
ATOM 19 N6 A A2042 54.562 117.692 99.372 1.00 21.77 N
ATOM 20 N1 A A2042 54.027 119.775 98.513 1.00 20.92 N
ATOM 21 C2 A A2042 53.777 121.072 98.719 1.00 21.44 C
ATOM 22 N3 A A2042 53.776 121.759 99.863 1.00 23.17 N
ATOM 23 C4 A A2042 54.084 120.956 100.898 1.00 20.65 C
ATOM 24 P G A2043 54.987 126.610 100.262 1.00 26.35 P
ATOM 25 OP1 G A2043 55.058 125.802 99.022 1.00 23.01 O
ATOM 26 OP2 G A2043 56.237 126.993 100.953 1.00 26.14 O
ATOM 27 O5' G A2043 54.180 127.951 99.967 1.00 21.79 O
TER
ATOM 1 O3' A B2379 59.179 121.760 95.505 1.00 34.82 O
ATOM 2 P U B2380 57.985 121.014 96.300 1.00 30.54 P
ATOM 3 OP1 U B2380 58.391 119.608 96.530 1.00 29.45 O
ATOM 4 OP2 U B2380 56.693 121.303 95.678 1.00 33.55 O
ATOM 5 O5' U B2380 57.989 121.716 97.726 1.00 33.18 O
ATOM 6 C5' U B2380 57.239 122.915 97.960 1.00 32.92 C
ATOM 7 C4' U B2380 57.508 123.432 99.353 1.00 34.32 C
ATOM 8 O4' U B2380 56.992 122.478 100.326 1.00 32.61 O
ATOM 9 C3' U B2380 58.978 123.657 99.701 1.00 33.92 C
ATOM 10 O3' U B2380 59.108 124.802 100.530 1.00 37.21 O
ATOM 11 C2' U B2380 59.339 122.391 100.476 1.00 33.69 C
ATOM 12 O2' U B2380 60.381 122.586 101.404 1.00 32.98 O
ATOM 13 C1' U B2380 58.032 122.086 101.206 1.00 33.24 C
ATOM 14 N1 U B2380 57.859 120.659 101.528 1.00 30.35 N
ATOM 15 C2 U B2380 57.654 120.303 102.858 1.00 30.39 C
ATOM 16 O2 U B2380 57.612 121.108 103.769 1.00 30.16 O
ATOM 17 N3 U B2380 57.495 118.959 103.079 1.00 30.85 N
ATOM 18 C4 U B2380 57.518 117.955 102.137 1.00 31.21 C
ATOM 19 O4 U B2380 57.319 116.790 102.488 1.00 31.72 O
ATOM 20 C5 U B2380 57.738 118.401 100.795 1.00 30.65 C
ATOM 21 C6 U B2380 57.895 119.701 100.544 1.00 29.24 C
ATOM 22 P G B2381 60.077 126.010 100.081 1.00 39.83 P
ATOM 23 OP1 G B2381 59.967 127.068 101.120 1.00 40.01 O
ATOM 24 OP2 G B2381 59.788 126.338 98.668 1.00 40.01 O
ATOM 25 O5' G B2381 61.547 125.398 100.141 1.00 37.35 O
TER
ATOM 2 P A A2042 49.738 125.625 99.657 1.00 25.07 P
ATOM 3 OP1 A A2042 49.762 126.839 98.798 1.00 25.66 O
ATOM 4 OP2 A A2042 49.054 124.400 99.175 1.00 23.89 O
ATOM 5 O5' A A2042 51.220 125.204 100.052 1.00 23.47 O
ATOM 6 C5' A A2042 51.450 123.971 100.746 1.00 23.47 C
ATOM 7 C4' A A2042 52.488 124.153 101.823 1.00 21.55 C
ATOM 8 O4' A A2042 52.581 122.926 102.581 1.00 19.47 O
ATOM 9 C3' A A2042 53.883 124.451 101.299 1.00 20.79 C
ATOM 10 O3' A A2042 54.043 125.862 101.330 1.00 23.20 O
ATOM 11 C2' A A2042 54.802 123.779 102.316 1.00 21.64 C
ATOM 12 O2' A A2042 55.153 124.632 103.384 1.00 20.30 O
ATOM 13 C1' A A2042 53.934 122.612 102.814 1.00 19.51 C
ATOM 14 N9 A A2042 54.173 121.300 102.225 1.00 18.70 N
ATOM 15 C8 A A2042 54.498 120.149 102.891 1.00 18.67 C
ATOM 16 N7 A A2042 54.617 119.104 102.112 1.00 20.25 N
ATOM 17 C5 A A2042 54.361 119.604 100.843 1.00 19.17 C
ATOM 18 C6 A A2042 54.325 118.995 99.577 1.00 21.04 C
ATOM 19 N6 A A2042 54.562 117.692 99.372 1.00 21.77 N
ATOM 20 N1 A A2042 54.027 119.775 98.513 1.00 20.92 N
ATOM 21 C2 A A2042 53.777 121.072 98.719 1.00 21.44 C
ATOM 22 N3 A A2042 53.776 121.759 99.863 1.00 23.17 N
ATOM 23 C4 A A2042 54.084 120.956 100.898 1.00 20.65 C
ATOM 24 P G A2043 54.987 126.610 100.262 1.00 26.35 P
ATOM 25 OP1 G A2043 55.058 125.802 99.022 1.00 23.01 O
ATOM 26 OP2 G A2043 56.237 126.993 100.953 1.00 26.14 O
ATOM 27 O5' G A2043 54.180 127.951 99.967 1.00 21.79 O
TER
ATOM 1 O3' A B2379 59.179 121.760 95.505 1.00 34.82 O
ATOM 2 P U B2380 57.985 121.014 96.300 1.00 30.54 P
ATOM 3 OP1 U B2380 58.391 119.608 96.530 1.00 29.45 O
ATOM 4 OP2 U B2380 56.693 121.303 95.678 1.00 33.55 O
ATOM 5 O5' U B2380 57.989 121.716 97.726 1.00 33.18 O
ATOM 6 C5' U B2380 57.239 122.915 97.960 1.00 32.92 C
ATOM 7 C4' U B2380 57.508 123.432 99.353 1.00 34.32 C
ATOM 8 O4' U B2380 56.992 122.478 100.326 1.00 32.61 O
ATOM 9 C3' U B2380 58.978 123.657 99.701 1.00 33.92 C
ATOM 10 O3' U B2380 59.108 124.802 100.530 1.00 37.21 O
ATOM 11 C2' U B2380 59.339 122.391 100.476 1.00 33.69 C
ATOM 12 O2' U B2380 60.381 122.586 101.404 1.00 32.98 O
ATOM 13 C1' U B2380 58.032 122.086 101.206 1.00 33.24 C
ATOM 14 N1 U B2380 57.859 120.659 101.528 1.00 30.35 N
ATOM 15 C2 U B2380 57.654 120.303 102.858 1.00 30.39 C
ATOM 16 O2 U B2380 57.612 121.108 103.769 1.00 30.16 O
ATOM 17 N3 U B2380 57.495 118.959 103.079 1.00 30.85 N
ATOM 18 C4 U B2380 57.518 117.955 102.137 1.00 31.21 C
ATOM 19 O4 U B2380 57.319 116.790 102.488 1.00 31.72 O
ATOM 20 C5 U B2380 57.738 118.401 100.795 1.00 30.65 C
ATOM 21 C6 U B2380 57.895 119.701 100.544 1.00 29.24 C
ATOM 22 P G B2381 60.077 126.010 100.081 1.00 39.83 P
ATOM 23 OP1 G B2381 59.967 127.068 101.120 1.00 40.01 O
ATOM 24 OP2 G B2381 59.788 126.338 98.668 1.00 40.01 O
ATOM 25 O5' G B2381 61.547 125.398 100.141 1.00 37.35 O
TER
Atoms:
OP1: (49.762,126.839,98.798)
OP2: (49.054,124.400,99.175)
C3': (53.883,124.451,101.299)
C1': (53.934,122.612,102.814)
C5': (51.450,123.971,100.746)
O4': (52.581,122.926,102.581)
C8: (54.498,120.149,102.891)
O2': (55.153,124.632,103.384)
C6: (54.325,118.995,99.577)
C5: (54.361,119.604,100.843)
C4: (54.084,120.956,100.898)
P: (49.738,125.625,99.657)
C4': (52.488,124.153,101.823)
C2': (54.802,123.779,102.316)
C2: (53.777,121.072,98.719)
N1: (54.027,119.775,98.513)
N3: (53.776,121.759,99.863)
N6: (54.562,117.692,99.372)
N7: (54.617,119.104,102.112)
N9: (54.173,121.300,102.225)
O5': (51.220,125.204,100.052)
O3': (54.043,125.862,101.330)
OP2: (49.054,124.400,99.175)
C3': (53.883,124.451,101.299)
C1': (53.934,122.612,102.814)
C5': (51.450,123.971,100.746)
O4': (52.581,122.926,102.581)
C8: (54.498,120.149,102.891)
O2': (55.153,124.632,103.384)
C6: (54.325,118.995,99.577)
C5: (54.361,119.604,100.843)
C4: (54.084,120.956,100.898)
P: (49.738,125.625,99.657)
C4': (52.488,124.153,101.823)
C2': (54.802,123.779,102.316)
C2: (53.777,121.072,98.719)
N1: (54.027,119.775,98.513)
N3: (53.776,121.759,99.863)
N6: (54.562,117.692,99.372)
N7: (54.617,119.104,102.112)
N9: (54.173,121.300,102.225)
O5': (51.220,125.204,100.052)
O3': (54.043,125.862,101.330)
C4: (57.518,117.955,102.137)
N3: (57.495,118.959,103.079)
OP1: (58.391,119.608,96.530)
OP2: (56.693,121.303,95.678)
C2: (57.654,120.303,102.858)
C1': (58.032,122.086,101.206)
C3': (58.978,123.657,99.701)
O5': (57.989,121.716,97.726)
O4': (56.992,122.478,100.326)
C5': (57.239,122.915,97.960)
P: (57.985,121.014,96.300)
C4': (57.508,123.432,99.353)
C2': (59.339,122.391,100.476)
O2': (60.381,122.586,101.404)
N1: (57.859,120.659,101.528)
O4: (57.319,116.790,102.488)
O2: (57.612,121.108,103.769)
C6: (57.895,119.701,100.544)
C5: (57.738,118.401,100.795)
O3': (59.108,124.802,100.530)
N3: (57.495,118.959,103.079)
OP1: (58.391,119.608,96.530)
OP2: (56.693,121.303,95.678)
C2: (57.654,120.303,102.858)
C1': (58.032,122.086,101.206)
C3': (58.978,123.657,99.701)
O5': (57.989,121.716,97.726)
O4': (56.992,122.478,100.326)
C5': (57.239,122.915,97.960)
P: (57.985,121.014,96.300)
C4': (57.508,123.432,99.353)
C2': (59.339,122.391,100.476)
O2': (60.381,122.586,101.404)
N1: (57.859,120.659,101.528)
O4: (57.319,116.790,102.488)
O2: (57.612,121.108,103.769)
C6: (57.895,119.701,100.544)
C5: (57.738,118.401,100.795)
O3': (59.108,124.802,100.530)
Image (generated by PyMOL):