Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:E20:E19
Extra
PDB:
ATOM 1 O3' C A 19 11.404 -6.733 38.857 1.00 44.94 O
ATOM 2 P G A 20 9.878 -6.268 38.816 1.00 48.36 P
ATOM 3 OP1 G A 20 9.464 -6.226 37.397 1.00 49.27 O
ATOM 4 OP2 G A 20 9.773 -5.055 39.650 1.00 48.14 O
ATOM 5 O5' G A 20 9.101 -7.446 39.533 1.00 50.94 O
ATOM 6 C5' G A 20 9.103 -8.679 38.911 1.00 55.72 C
ATOM 7 C4' G A 20 8.729 -9.616 40.001 1.00 59.19 C
ATOM 8 O4' G A 20 9.678 -9.401 41.052 1.00 59.80 O
ATOM 9 C3' G A 20 7.402 -9.293 40.641 1.00 62.69 C
ATOM 10 O3' G A 20 6.322 -9.792 39.887 1.00 69.14 O
ATOM 11 C2' G A 20 7.575 -10.070 41.913 1.00 62.37 C
ATOM 12 O2' G A 20 7.316 -11.445 41.720 1.00 62.10 O
ATOM 13 C1' G A 20 9.034 -9.752 42.244 1.00 61.32 C
ATOM 14 N9 G A 20 9.019 -8.668 43.217 1.00 60.86 N
ATOM 15 C8 G A 20 9.172 -7.306 43.063 1.00 60.64 C
ATOM 16 N7 G A 20 9.053 -6.654 44.188 1.00 59.87 N
ATOM 17 C5 G A 20 8.784 -7.655 45.119 1.00 59.19 C
ATOM 18 C6 G A 20 8.559 -7.593 46.502 1.00 58.60 C
ATOM 19 O6 G A 20 8.548 -6.573 47.193 1.00 58.27 O
ATOM 20 N1 G A 20 8.329 -8.853 47.063 1.00 58.41 N
ATOM 21 C2 G A 20 8.316 -10.041 46.362 1.00 58.92 C
ATOM 22 N2 G A 20 8.093 -11.198 47.017 1.00 59.15 N
ATOM 23 N3 G A 20 8.526 -10.103 45.070 1.00 58.64 N
ATOM 24 C4 G A 20 8.752 -8.886 44.536 1.00 59.43 C
ATOM 25 P G A 21 4.902 -9.059 39.803 1.00 74.63 P
ATOM 26 OP1 G A 21 4.239 -9.488 38.550 1.00 74.58 O
ATOM 27 OP2 G A 21 5.051 -7.626 40.138 1.00 74.49 O
ATOM 28 O5' G A 21 4.135 -9.706 41.034 1.00 80.00 O
TER
ATOM 1 O3' U B 18 15.403 -1.999 40.927 1.00 35.06 O
ATOM 2 P C B 19 13.823 -2.232 40.762 1.00 35.53 P
ATOM 3 OP1 C B 19 13.543 -1.790 39.363 1.00 35.98 O
ATOM 4 OP2 C B 19 13.142 -1.636 41.934 1.00 33.12 O
ATOM 5 O5' C B 19 13.625 -3.819 40.835 1.00 36.13 O
ATOM 6 C5' C B 19 13.553 -4.611 39.638 1.00 38.15 C
ATOM 7 C4' C B 19 13.447 -6.104 39.914 1.00 39.52 C
ATOM 8 O4' C B 19 14.046 -6.481 41.175 1.00 39.38 O
ATOM 9 C3' C B 19 12.051 -6.633 40.094 1.00 40.85 C
ATOM 10 O3' C B 19 11.404 -6.733 38.857 1.00 44.94 O
ATOM 11 C2' C B 19 12.333 -7.996 40.685 1.00 39.89 C
ATOM 12 O2' C B 19 12.785 -8.896 39.701 1.00 39.59 O
ATOM 13 C1' C B 19 13.436 -7.665 41.673 1.00 39.22 C
ATOM 14 N1 C B 19 12.967 -7.480 43.109 1.00 37.62 N
ATOM 15 C2 C B 19 12.570 -8.579 43.877 1.00 36.23 C
ATOM 16 O2 C B 19 12.585 -9.714 43.428 1.00 36.03 O
ATOM 17 N3 C B 19 12.167 -8.381 45.139 1.00 36.04 N
ATOM 18 C4 C B 19 12.149 -7.159 45.660 1.00 36.07 C
ATOM 19 N4 C B 19 11.753 -7.047 46.932 1.00 36.05 N
ATOM 20 C5 C B 19 12.547 -6.017 44.914 1.00 35.88 C
ATOM 21 C6 C B 19 12.944 -6.229 43.662 1.00 36.72 C
ATOM 22 P G B 20 9.878 -6.268 38.816 1.00 48.36 P
ATOM 23 OP1 G B 20 9.464 -6.226 37.397 1.00 49.27 O
ATOM 24 OP2 G B 20 9.773 -5.055 39.650 1.00 48.14 O
ATOM 25 O5' G B 20 9.101 -7.446 39.533 1.00 50.94 O
TER
ATOM 2 P G A 20 9.878 -6.268 38.816 1.00 48.36 P
ATOM 3 OP1 G A 20 9.464 -6.226 37.397 1.00 49.27 O
ATOM 4 OP2 G A 20 9.773 -5.055 39.650 1.00 48.14 O
ATOM 5 O5' G A 20 9.101 -7.446 39.533 1.00 50.94 O
ATOM 6 C5' G A 20 9.103 -8.679 38.911 1.00 55.72 C
ATOM 7 C4' G A 20 8.729 -9.616 40.001 1.00 59.19 C
ATOM 8 O4' G A 20 9.678 -9.401 41.052 1.00 59.80 O
ATOM 9 C3' G A 20 7.402 -9.293 40.641 1.00 62.69 C
ATOM 10 O3' G A 20 6.322 -9.792 39.887 1.00 69.14 O
ATOM 11 C2' G A 20 7.575 -10.070 41.913 1.00 62.37 C
ATOM 12 O2' G A 20 7.316 -11.445 41.720 1.00 62.10 O
ATOM 13 C1' G A 20 9.034 -9.752 42.244 1.00 61.32 C
ATOM 14 N9 G A 20 9.019 -8.668 43.217 1.00 60.86 N
ATOM 15 C8 G A 20 9.172 -7.306 43.063 1.00 60.64 C
ATOM 16 N7 G A 20 9.053 -6.654 44.188 1.00 59.87 N
ATOM 17 C5 G A 20 8.784 -7.655 45.119 1.00 59.19 C
ATOM 18 C6 G A 20 8.559 -7.593 46.502 1.00 58.60 C
ATOM 19 O6 G A 20 8.548 -6.573 47.193 1.00 58.27 O
ATOM 20 N1 G A 20 8.329 -8.853 47.063 1.00 58.41 N
ATOM 21 C2 G A 20 8.316 -10.041 46.362 1.00 58.92 C
ATOM 22 N2 G A 20 8.093 -11.198 47.017 1.00 59.15 N
ATOM 23 N3 G A 20 8.526 -10.103 45.070 1.00 58.64 N
ATOM 24 C4 G A 20 8.752 -8.886 44.536 1.00 59.43 C
ATOM 25 P G A 21 4.902 -9.059 39.803 1.00 74.63 P
ATOM 26 OP1 G A 21 4.239 -9.488 38.550 1.00 74.58 O
ATOM 27 OP2 G A 21 5.051 -7.626 40.138 1.00 74.49 O
ATOM 28 O5' G A 21 4.135 -9.706 41.034 1.00 80.00 O
TER
ATOM 1 O3' U B 18 15.403 -1.999 40.927 1.00 35.06 O
ATOM 2 P C B 19 13.823 -2.232 40.762 1.00 35.53 P
ATOM 3 OP1 C B 19 13.543 -1.790 39.363 1.00 35.98 O
ATOM 4 OP2 C B 19 13.142 -1.636 41.934 1.00 33.12 O
ATOM 5 O5' C B 19 13.625 -3.819 40.835 1.00 36.13 O
ATOM 6 C5' C B 19 13.553 -4.611 39.638 1.00 38.15 C
ATOM 7 C4' C B 19 13.447 -6.104 39.914 1.00 39.52 C
ATOM 8 O4' C B 19 14.046 -6.481 41.175 1.00 39.38 O
ATOM 9 C3' C B 19 12.051 -6.633 40.094 1.00 40.85 C
ATOM 10 O3' C B 19 11.404 -6.733 38.857 1.00 44.94 O
ATOM 11 C2' C B 19 12.333 -7.996 40.685 1.00 39.89 C
ATOM 12 O2' C B 19 12.785 -8.896 39.701 1.00 39.59 O
ATOM 13 C1' C B 19 13.436 -7.665 41.673 1.00 39.22 C
ATOM 14 N1 C B 19 12.967 -7.480 43.109 1.00 37.62 N
ATOM 15 C2 C B 19 12.570 -8.579 43.877 1.00 36.23 C
ATOM 16 O2 C B 19 12.585 -9.714 43.428 1.00 36.03 O
ATOM 17 N3 C B 19 12.167 -8.381 45.139 1.00 36.04 N
ATOM 18 C4 C B 19 12.149 -7.159 45.660 1.00 36.07 C
ATOM 19 N4 C B 19 11.753 -7.047 46.932 1.00 36.05 N
ATOM 20 C5 C B 19 12.547 -6.017 44.914 1.00 35.88 C
ATOM 21 C6 C B 19 12.944 -6.229 43.662 1.00 36.72 C
ATOM 22 P G B 20 9.878 -6.268 38.816 1.00 48.36 P
ATOM 23 OP1 G B 20 9.464 -6.226 37.397 1.00 49.27 O
ATOM 24 OP2 G B 20 9.773 -5.055 39.650 1.00 48.14 O
ATOM 25 O5' G B 20 9.101 -7.446 39.533 1.00 50.94 O
TER
Atoms:
OP1: (9.464,-6.226,37.397)
OP2: (9.773,-5.055,39.650)
C3': (7.402,-9.293,40.641)
C1': (9.034,-9.752,42.244)
C5': (9.103,-8.679,38.911)
O6: (8.548,-6.573,47.193)
O4': (9.678,-9.401,41.052)
C8: (9.172,-7.306,43.063)
C2: (8.316,-10.041,46.362)
C6: (8.559,-7.593,46.502)
C5: (8.784,-7.655,45.119)
C4: (8.752,-8.886,44.536)
P: (9.878,-6.268,38.816)
C4': (8.729,-9.616,40.001)
C2': (7.575,-10.070,41.913)
O2': (7.316,-11.445,41.720)
N1: (8.329,-8.853,47.063)
N2: (8.093,-11.198,47.017)
N3: (8.526,-10.103,45.070)
N7: (9.053,-6.654,44.188)
N9: (9.019,-8.668,43.217)
O5': (9.101,-7.446,39.533)
O3': (6.322,-9.792,39.887)
OP2: (9.773,-5.055,39.650)
C3': (7.402,-9.293,40.641)
C1': (9.034,-9.752,42.244)
C5': (9.103,-8.679,38.911)
O6: (8.548,-6.573,47.193)
O4': (9.678,-9.401,41.052)
C8: (9.172,-7.306,43.063)
C2: (8.316,-10.041,46.362)
C6: (8.559,-7.593,46.502)
C5: (8.784,-7.655,45.119)
C4: (8.752,-8.886,44.536)
P: (9.878,-6.268,38.816)
C4': (8.729,-9.616,40.001)
C2': (7.575,-10.070,41.913)
O2': (7.316,-11.445,41.720)
N1: (8.329,-8.853,47.063)
N2: (8.093,-11.198,47.017)
N3: (8.526,-10.103,45.070)
N7: (9.053,-6.654,44.188)
N9: (9.019,-8.668,43.217)
O5': (9.101,-7.446,39.533)
O3': (6.322,-9.792,39.887)
C2: (12.570,-8.579,43.877)
OP1: (13.543,-1.790,39.363)
OP2: (13.142,-1.636,41.934)
C4: (12.149,-7.159,45.660)
O5': (13.625,-3.819,40.835)
C3': (12.051,-6.633,40.094)
C1': (13.436,-7.665,41.673)
O4': (14.046,-6.481,41.175)
C5': (13.553,-4.611,39.638)
P: (13.823,-2.232,40.762)
O2: (12.585,-9.714,43.428)
C4': (13.447,-6.104,39.914)
C2': (12.333,-7.996,40.685)
O2': (12.785,-8.896,39.701)
N1: (12.967,-7.480,43.109)
N3: (12.167,-8.381,45.139)
N4: (11.753,-7.047,46.932)
C6: (12.944,-6.229,43.662)
C5: (12.547,-6.017,44.914)
O3': (11.404,-6.733,38.857)
OP1: (13.543,-1.790,39.363)
OP2: (13.142,-1.636,41.934)
C4: (12.149,-7.159,45.660)
O5': (13.625,-3.819,40.835)
C3': (12.051,-6.633,40.094)
C1': (13.436,-7.665,41.673)
O4': (14.046,-6.481,41.175)
C5': (13.553,-4.611,39.638)
P: (13.823,-2.232,40.762)
O2: (12.585,-9.714,43.428)
C4': (13.447,-6.104,39.914)
C2': (12.333,-7.996,40.685)
O2': (12.785,-8.896,39.701)
N1: (12.967,-7.480,43.109)
N3: (12.167,-8.381,45.139)
N4: (11.753,-7.047,46.932)
C6: (12.944,-6.229,43.662)
C5: (12.547,-6.017,44.914)
O3': (11.404,-6.733,38.857)
Image (generated by PyMOL):