Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I56:0235:0253
Extra
PDB:
ATOM 1 O3' G A 234 94.136 118.313 -7.616 1.00 57.50 O
ATOM 2 P A A 235 94.680 119.331 -8.736 1.00 57.25 P
ATOM 3 OP1 A A 235 94.245 118.821 -10.061 1.00 58.24 O
ATOM 4 OP2 A A 235 96.126 119.580 -8.485 1.00 55.62 O
ATOM 5 O5' A A 235 93.876 120.674 -8.467 1.00 54.43 O
ATOM 6 C5' A A 235 92.496 120.802 -8.844 1.00 53.02 C
ATOM 7 C4' A A 235 91.890 121.986 -8.135 1.00 53.72 C
ATOM 8 O4' A A 235 91.790 121.693 -6.715 1.00 53.54 O
ATOM 9 C3' A A 235 92.701 123.273 -8.235 1.00 52.96 C
ATOM 10 O3' A A 235 91.819 124.374 -8.135 1.00 52.38 O
ATOM 11 C2' A A 235 93.547 123.226 -6.973 1.00 53.06 C
ATOM 12 O2' A A 235 93.983 124.508 -6.576 1.00 51.61 O
ATOM 13 C1' A A 235 92.541 122.641 -5.984 1.00 53.34 C
ATOM 14 N9 A A 235 93.118 121.963 -4.827 1.00 53.55 N
ATOM 15 C8 A A 235 93.873 120.816 -4.797 1.00 54.45 C
ATOM 16 N7 A A 235 94.219 120.443 -3.589 1.00 54.74 N
ATOM 17 C5 A A 235 93.660 121.412 -2.769 1.00 53.78 C
ATOM 18 C6 A A 235 93.668 121.589 -1.384 1.00 53.03 C
ATOM 19 N6 A A 235 94.278 120.761 -0.540 1.00 53.15 N
ATOM 20 N1 A A 235 93.019 122.661 -0.884 1.00 53.31 N
ATOM 21 C2 A A 235 92.406 123.492 -1.733 1.00 53.10 C
ATOM 22 N3 A A 235 92.327 123.433 -3.055 1.00 53.21 N
ATOM 23 C4 A A 235 92.983 122.357 -3.518 1.00 53.56 C
ATOM 24 P A A 236 91.269 125.065 -9.464 1.00 53.79 P
ATOM 25 OP1 A A 236 92.310 124.858 -10.506 1.00 53.62 O
ATOM 26 OP2 A A 236 90.816 126.440 -9.127 1.00 54.31 O
ATOM 27 O5' A A 236 89.998 124.194 -9.864 1.00 52.75 O
TER
ATOM 1 O3' G B 252 91.562 119.939 3.429 1.00 43.24 O
ATOM 2 P U B 253 90.276 119.817 4.377 1.00 42.31 P
ATOM 3 OP1 U B 253 90.665 120.372 5.692 1.00 42.97 O
ATOM 4 OP2 U B 253 89.753 118.437 4.300 1.00 43.13 O
ATOM 5 O5' U B 253 89.208 120.773 3.694 1.00 41.65 O
ATOM 6 C5' U B 253 89.058 122.140 4.107 1.00 41.32 C
ATOM 7 C4' U B 253 88.602 122.974 2.941 1.00 41.20 C
ATOM 8 O4' U B 253 89.707 123.139 2.017 1.00 40.59 O
ATOM 9 C3' U B 253 87.516 122.324 2.104 1.00 40.83 C
ATOM 10 O3' U B 253 86.217 122.492 2.647 1.00 40.83 O
ATOM 11 C2' U B 253 87.699 122.990 0.753 1.00 40.58 C
ATOM 12 O2' U B 253 87.110 124.273 0.703 1.00 40.72 O
ATOM 13 C1' U B 253 89.226 123.091 0.682 1.00 40.41 C
ATOM 14 N1 U B 253 89.861 121.946 0.009 1.00 39.94 N
ATOM 15 C2 U B 253 89.631 121.779 -1.347 1.00 40.23 C
ATOM 16 O2 U B 253 88.938 122.537 -2.006 1.00 40.52 O
ATOM 17 N3 U B 253 90.246 120.688 -1.906 1.00 39.97 N
ATOM 18 C4 U B 253 91.049 119.771 -1.272 1.00 39.90 C
ATOM 19 O4 U B 253 91.535 118.845 -1.924 1.00 40.70 O
ATOM 20 C5 U B 253 91.244 120.010 0.124 1.00 39.65 C
ATOM 21 C6 U B 253 90.660 121.061 0.702 1.00 39.43 C
ATOM 22 P G B 254 85.202 121.251 2.638 1.00 41.48 P
ATOM 23 OP1 G B 254 83.884 121.735 3.129 1.00 38.79 O
ATOM 24 OP2 G B 254 85.872 120.110 3.313 1.00 41.03 O
ATOM 25 O5' G B 254 85.074 120.872 1.096 1.00 42.59 O
TER
ATOM 2 P A A 235 94.680 119.331 -8.736 1.00 57.25 P
ATOM 3 OP1 A A 235 94.245 118.821 -10.061 1.00 58.24 O
ATOM 4 OP2 A A 235 96.126 119.580 -8.485 1.00 55.62 O
ATOM 5 O5' A A 235 93.876 120.674 -8.467 1.00 54.43 O
ATOM 6 C5' A A 235 92.496 120.802 -8.844 1.00 53.02 C
ATOM 7 C4' A A 235 91.890 121.986 -8.135 1.00 53.72 C
ATOM 8 O4' A A 235 91.790 121.693 -6.715 1.00 53.54 O
ATOM 9 C3' A A 235 92.701 123.273 -8.235 1.00 52.96 C
ATOM 10 O3' A A 235 91.819 124.374 -8.135 1.00 52.38 O
ATOM 11 C2' A A 235 93.547 123.226 -6.973 1.00 53.06 C
ATOM 12 O2' A A 235 93.983 124.508 -6.576 1.00 51.61 O
ATOM 13 C1' A A 235 92.541 122.641 -5.984 1.00 53.34 C
ATOM 14 N9 A A 235 93.118 121.963 -4.827 1.00 53.55 N
ATOM 15 C8 A A 235 93.873 120.816 -4.797 1.00 54.45 C
ATOM 16 N7 A A 235 94.219 120.443 -3.589 1.00 54.74 N
ATOM 17 C5 A A 235 93.660 121.412 -2.769 1.00 53.78 C
ATOM 18 C6 A A 235 93.668 121.589 -1.384 1.00 53.03 C
ATOM 19 N6 A A 235 94.278 120.761 -0.540 1.00 53.15 N
ATOM 20 N1 A A 235 93.019 122.661 -0.884 1.00 53.31 N
ATOM 21 C2 A A 235 92.406 123.492 -1.733 1.00 53.10 C
ATOM 22 N3 A A 235 92.327 123.433 -3.055 1.00 53.21 N
ATOM 23 C4 A A 235 92.983 122.357 -3.518 1.00 53.56 C
ATOM 24 P A A 236 91.269 125.065 -9.464 1.00 53.79 P
ATOM 25 OP1 A A 236 92.310 124.858 -10.506 1.00 53.62 O
ATOM 26 OP2 A A 236 90.816 126.440 -9.127 1.00 54.31 O
ATOM 27 O5' A A 236 89.998 124.194 -9.864 1.00 52.75 O
TER
ATOM 1 O3' G B 252 91.562 119.939 3.429 1.00 43.24 O
ATOM 2 P U B 253 90.276 119.817 4.377 1.00 42.31 P
ATOM 3 OP1 U B 253 90.665 120.372 5.692 1.00 42.97 O
ATOM 4 OP2 U B 253 89.753 118.437 4.300 1.00 43.13 O
ATOM 5 O5' U B 253 89.208 120.773 3.694 1.00 41.65 O
ATOM 6 C5' U B 253 89.058 122.140 4.107 1.00 41.32 C
ATOM 7 C4' U B 253 88.602 122.974 2.941 1.00 41.20 C
ATOM 8 O4' U B 253 89.707 123.139 2.017 1.00 40.59 O
ATOM 9 C3' U B 253 87.516 122.324 2.104 1.00 40.83 C
ATOM 10 O3' U B 253 86.217 122.492 2.647 1.00 40.83 O
ATOM 11 C2' U B 253 87.699 122.990 0.753 1.00 40.58 C
ATOM 12 O2' U B 253 87.110 124.273 0.703 1.00 40.72 O
ATOM 13 C1' U B 253 89.226 123.091 0.682 1.00 40.41 C
ATOM 14 N1 U B 253 89.861 121.946 0.009 1.00 39.94 N
ATOM 15 C2 U B 253 89.631 121.779 -1.347 1.00 40.23 C
ATOM 16 O2 U B 253 88.938 122.537 -2.006 1.00 40.52 O
ATOM 17 N3 U B 253 90.246 120.688 -1.906 1.00 39.97 N
ATOM 18 C4 U B 253 91.049 119.771 -1.272 1.00 39.90 C
ATOM 19 O4 U B 253 91.535 118.845 -1.924 1.00 40.70 O
ATOM 20 C5 U B 253 91.244 120.010 0.124 1.00 39.65 C
ATOM 21 C6 U B 253 90.660 121.061 0.702 1.00 39.43 C
ATOM 22 P G B 254 85.202 121.251 2.638 1.00 41.48 P
ATOM 23 OP1 G B 254 83.884 121.735 3.129 1.00 38.79 O
ATOM 24 OP2 G B 254 85.872 120.110 3.313 1.00 41.03 O
ATOM 25 O5' G B 254 85.074 120.872 1.096 1.00 42.59 O
TER
Atoms:
OP1: (94.245,118.821,-10.061)
OP2: (96.126,119.580,-8.485)
C3': (92.701,123.273,-8.235)
C1': (92.541,122.641,-5.984)
C5': (92.496,120.802,-8.844)
O4': (91.790,121.693,-6.715)
C8: (93.873,120.816,-4.797)
O2': (93.983,124.508,-6.576)
C6: (93.668,121.589,-1.384)
C5: (93.660,121.412,-2.769)
C4: (92.983,122.357,-3.518)
P: (94.680,119.331,-8.736)
C4': (91.890,121.986,-8.135)
C2': (93.547,123.226,-6.973)
C2: (92.406,123.492,-1.733)
N1: (93.019,122.661,-0.884)
N3: (92.327,123.433,-3.055)
N6: (94.278,120.761,-0.540)
N7: (94.219,120.443,-3.589)
N9: (93.118,121.963,-4.827)
O5': (93.876,120.674,-8.467)
O3': (91.819,124.374,-8.135)
OP2: (96.126,119.580,-8.485)
C3': (92.701,123.273,-8.235)
C1': (92.541,122.641,-5.984)
C5': (92.496,120.802,-8.844)
O4': (91.790,121.693,-6.715)
C8: (93.873,120.816,-4.797)
O2': (93.983,124.508,-6.576)
C6: (93.668,121.589,-1.384)
C5: (93.660,121.412,-2.769)
C4: (92.983,122.357,-3.518)
P: (94.680,119.331,-8.736)
C4': (91.890,121.986,-8.135)
C2': (93.547,123.226,-6.973)
C2: (92.406,123.492,-1.733)
N1: (93.019,122.661,-0.884)
N3: (92.327,123.433,-3.055)
N6: (94.278,120.761,-0.540)
N7: (94.219,120.443,-3.589)
N9: (93.118,121.963,-4.827)
O5': (93.876,120.674,-8.467)
O3': (91.819,124.374,-8.135)
C4: (91.049,119.771,-1.272)
N3: (90.246,120.688,-1.906)
OP1: (90.665,120.372,5.692)
OP2: (89.753,118.437,4.300)
C2: (89.631,121.779,-1.347)
C1': (89.226,123.091,0.682)
C3': (87.516,122.324,2.104)
O5': (89.208,120.773,3.694)
O4': (89.707,123.139,2.017)
C5': (89.058,122.140,4.107)
P: (90.276,119.817,4.377)
C4': (88.602,122.974,2.941)
C2': (87.699,122.990,0.753)
O2': (87.110,124.273,0.703)
N1: (89.861,121.946,0.009)
O4: (91.535,118.845,-1.924)
O2: (88.938,122.537,-2.006)
C6: (90.660,121.061,0.702)
C5: (91.244,120.010,0.124)
O3': (86.217,122.492,2.647)
N3: (90.246,120.688,-1.906)
OP1: (90.665,120.372,5.692)
OP2: (89.753,118.437,4.300)
C2: (89.631,121.779,-1.347)
C1': (89.226,123.091,0.682)
C3': (87.516,122.324,2.104)
O5': (89.208,120.773,3.694)
O4': (89.707,123.139,2.017)
C5': (89.058,122.140,4.107)
P: (90.276,119.817,4.377)
C4': (88.602,122.974,2.941)
C2': (87.699,122.990,0.753)
O2': (87.110,124.273,0.703)
N1: (89.861,121.946,0.009)
O4: (91.535,118.845,-1.924)
O2: (88.938,122.537,-2.006)
C6: (90.660,121.061,0.702)
C5: (91.244,120.010,0.124)
O3': (86.217,122.492,2.647)
Image (generated by PyMOL):