Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MSY:A7:A9
Extra
PDB:
ATOM 1 O3' U A 6 17.408 19.283 4.359 1.00 9.26 O
ATOM 2 P A A 7 16.025 18.932 3.609 1.00 9.45 P
ATOM 3 OP1 A A 7 15.315 17.841 4.312 1.00 9.66 O
ATOM 4 OP2 A A 7 16.355 18.683 2.180 1.00 10.44 O
ATOM 5 O5' A A 7 15.219 20.293 3.819 1.00 9.24 O
ATOM 6 C5' A A 7 14.040 20.561 3.045 1.00 9.31 C
ATOM 7 C4' A A 7 12.930 21.068 3.917 1.00 9.24 C
ATOM 8 O4' A A 7 12.607 20.058 4.922 1.00 9.06 O
ATOM 9 C3' A A 7 13.304 22.328 4.718 1.00 9.41 C
ATOM 10 O3' A A 7 12.089 23.088 4.892 1.00 10.56 O
ATOM 11 C2' A A 7 13.644 21.743 6.096 1.00 8.96 C
ATOM 12 O2' A A 7 13.525 22.715 7.110 1.00 8.75 O
ATOM 13 C1' A A 7 12.564 20.648 6.214 1.00 8.89 C
ATOM 14 N9 A A 7 12.966 19.608 7.185 1.00 8.44 N
ATOM 15 C8 A A 7 13.909 18.641 6.995 1.00 8.22 C
ATOM 16 N7 A A 7 14.036 17.880 8.057 1.00 8.13 N
ATOM 17 C5 A A 7 13.145 18.385 8.999 1.00 8.19 C
ATOM 18 C6 A A 7 12.831 18.014 10.319 1.00 8.31 C
ATOM 19 N6 A A 7 13.377 17.001 11.006 1.00 8.25 N
ATOM 20 N1 A A 7 11.881 18.746 10.958 1.00 8.53 N
ATOM 21 C2 A A 7 11.300 19.778 10.329 1.00 8.47 C
ATOM 22 N3 A A 7 11.548 20.198 9.078 1.00 8.50 N
ATOM 23 C4 A A 7 12.479 19.456 8.460 1.00 8.35 C
ATOM 24 P G A 8 11.778 24.322 3.910 1.00 11.36 P
ATOM 25 OP1 G A 8 12.086 23.961 2.521 1.00 12.05 O
ATOM 26 OP2 G A 8 12.342 25.559 4.488 1.00 12.96 O
ATOM 27 O5' G A 8 10.200 24.439 4.183 1.00 11.60 O
TER
ATOM 1 O3' G B 8 8.096 20.385 3.146 1.00 10.36 O
ATOM 2 P U B 9 7.400 19.329 2.173 1.00 10.55 P
ATOM 3 OP1 U B 9 6.999 20.027 0.926 1.00 11.06 O
ATOM 4 OP2 U B 9 6.422 18.542 2.959 1.00 11.09 O
ATOM 5 O5' U B 9 8.603 18.332 1.895 1.00 10.41 O
ATOM 6 C5' U B 9 9.703 18.753 1.037 1.00 10.08 C
ATOM 7 C4' U B 9 10.880 17.878 1.409 1.00 9.84 C
ATOM 8 O4' U B 9 11.503 18.373 2.626 1.00 9.37 O
ATOM 9 C3' U B 9 10.554 16.421 1.734 1.00 9.78 C
ATOM 10 O3' U B 9 10.669 15.660 0.508 1.00 10.40 O
ATOM 11 C2' U B 9 11.710 16.038 2.665 1.00 9.48 C
ATOM 12 O2' U B 9 12.949 15.861 1.974 1.00 10.14 O
ATOM 13 C1' U B 9 11.838 17.305 3.475 1.00 9.27 C
ATOM 14 N1 U B 9 11.110 17.451 4.729 1.00 8.62 N
ATOM 15 C2 U B 9 11.430 16.547 5.728 1.00 8.44 C
ATOM 16 O2 U B 9 12.304 15.698 5.586 1.00 8.51 O
ATOM 17 N3 U B 9 10.762 16.724 6.895 1.00 8.18 N
ATOM 18 C4 U B 9 9.789 17.656 7.155 1.00 8.23 C
ATOM 19 O4 U B 9 9.293 17.708 8.287 1.00 8.40 O
ATOM 20 C5 U B 9 9.530 18.572 6.091 1.00 8.18 C
ATOM 21 C6 U B 9 10.133 18.411 4.909 1.00 8.40 C
ATOM 22 P A B 10 9.611 14.500 0.214 1.00 10.65 P
ATOM 23 OP1 A B 10 9.993 13.896 -1.097 1.00 11.48 O
ATOM 24 OP2 A B 10 8.227 14.947 0.451 1.00 10.90 O
ATOM 25 O5' A B 10 9.943 13.444 1.384 1.00 10.06 O
TER
ATOM 2 P A A 7 16.025 18.932 3.609 1.00 9.45 P
ATOM 3 OP1 A A 7 15.315 17.841 4.312 1.00 9.66 O
ATOM 4 OP2 A A 7 16.355 18.683 2.180 1.00 10.44 O
ATOM 5 O5' A A 7 15.219 20.293 3.819 1.00 9.24 O
ATOM 6 C5' A A 7 14.040 20.561 3.045 1.00 9.31 C
ATOM 7 C4' A A 7 12.930 21.068 3.917 1.00 9.24 C
ATOM 8 O4' A A 7 12.607 20.058 4.922 1.00 9.06 O
ATOM 9 C3' A A 7 13.304 22.328 4.718 1.00 9.41 C
ATOM 10 O3' A A 7 12.089 23.088 4.892 1.00 10.56 O
ATOM 11 C2' A A 7 13.644 21.743 6.096 1.00 8.96 C
ATOM 12 O2' A A 7 13.525 22.715 7.110 1.00 8.75 O
ATOM 13 C1' A A 7 12.564 20.648 6.214 1.00 8.89 C
ATOM 14 N9 A A 7 12.966 19.608 7.185 1.00 8.44 N
ATOM 15 C8 A A 7 13.909 18.641 6.995 1.00 8.22 C
ATOM 16 N7 A A 7 14.036 17.880 8.057 1.00 8.13 N
ATOM 17 C5 A A 7 13.145 18.385 8.999 1.00 8.19 C
ATOM 18 C6 A A 7 12.831 18.014 10.319 1.00 8.31 C
ATOM 19 N6 A A 7 13.377 17.001 11.006 1.00 8.25 N
ATOM 20 N1 A A 7 11.881 18.746 10.958 1.00 8.53 N
ATOM 21 C2 A A 7 11.300 19.778 10.329 1.00 8.47 C
ATOM 22 N3 A A 7 11.548 20.198 9.078 1.00 8.50 N
ATOM 23 C4 A A 7 12.479 19.456 8.460 1.00 8.35 C
ATOM 24 P G A 8 11.778 24.322 3.910 1.00 11.36 P
ATOM 25 OP1 G A 8 12.086 23.961 2.521 1.00 12.05 O
ATOM 26 OP2 G A 8 12.342 25.559 4.488 1.00 12.96 O
ATOM 27 O5' G A 8 10.200 24.439 4.183 1.00 11.60 O
TER
ATOM 1 O3' G B 8 8.096 20.385 3.146 1.00 10.36 O
ATOM 2 P U B 9 7.400 19.329 2.173 1.00 10.55 P
ATOM 3 OP1 U B 9 6.999 20.027 0.926 1.00 11.06 O
ATOM 4 OP2 U B 9 6.422 18.542 2.959 1.00 11.09 O
ATOM 5 O5' U B 9 8.603 18.332 1.895 1.00 10.41 O
ATOM 6 C5' U B 9 9.703 18.753 1.037 1.00 10.08 C
ATOM 7 C4' U B 9 10.880 17.878 1.409 1.00 9.84 C
ATOM 8 O4' U B 9 11.503 18.373 2.626 1.00 9.37 O
ATOM 9 C3' U B 9 10.554 16.421 1.734 1.00 9.78 C
ATOM 10 O3' U B 9 10.669 15.660 0.508 1.00 10.40 O
ATOM 11 C2' U B 9 11.710 16.038 2.665 1.00 9.48 C
ATOM 12 O2' U B 9 12.949 15.861 1.974 1.00 10.14 O
ATOM 13 C1' U B 9 11.838 17.305 3.475 1.00 9.27 C
ATOM 14 N1 U B 9 11.110 17.451 4.729 1.00 8.62 N
ATOM 15 C2 U B 9 11.430 16.547 5.728 1.00 8.44 C
ATOM 16 O2 U B 9 12.304 15.698 5.586 1.00 8.51 O
ATOM 17 N3 U B 9 10.762 16.724 6.895 1.00 8.18 N
ATOM 18 C4 U B 9 9.789 17.656 7.155 1.00 8.23 C
ATOM 19 O4 U B 9 9.293 17.708 8.287 1.00 8.40 O
ATOM 20 C5 U B 9 9.530 18.572 6.091 1.00 8.18 C
ATOM 21 C6 U B 9 10.133 18.411 4.909 1.00 8.40 C
ATOM 22 P A B 10 9.611 14.500 0.214 1.00 10.65 P
ATOM 23 OP1 A B 10 9.993 13.896 -1.097 1.00 11.48 O
ATOM 24 OP2 A B 10 8.227 14.947 0.451 1.00 10.90 O
ATOM 25 O5' A B 10 9.943 13.444 1.384 1.00 10.06 O
TER
Atoms:
OP1: (15.315,17.841,4.312)
OP2: (16.355,18.683,2.180)
C3': (13.304,22.328,4.718)
C1': (12.564,20.648,6.214)
C5': (14.040,20.561,3.045)
O4': (12.607,20.058,4.922)
C8: (13.909,18.641,6.995)
O2': (13.525,22.715,7.110)
C6: (12.831,18.014,10.319)
C5: (13.145,18.385,8.999)
C4: (12.479,19.456,8.460)
P: (16.025,18.932,3.609)
C4': (12.930,21.068,3.917)
C2': (13.644,21.743,6.096)
C2: (11.300,19.778,10.329)
N1: (11.881,18.746,10.958)
N3: (11.548,20.198,9.078)
N6: (13.377,17.001,11.006)
N7: (14.036,17.880,8.057)
N9: (12.966,19.608,7.185)
O5': (15.219,20.293,3.819)
O3': (12.089,23.088,4.892)
OP2: (16.355,18.683,2.180)
C3': (13.304,22.328,4.718)
C1': (12.564,20.648,6.214)
C5': (14.040,20.561,3.045)
O4': (12.607,20.058,4.922)
C8: (13.909,18.641,6.995)
O2': (13.525,22.715,7.110)
C6: (12.831,18.014,10.319)
C5: (13.145,18.385,8.999)
C4: (12.479,19.456,8.460)
P: (16.025,18.932,3.609)
C4': (12.930,21.068,3.917)
C2': (13.644,21.743,6.096)
C2: (11.300,19.778,10.329)
N1: (11.881,18.746,10.958)
N3: (11.548,20.198,9.078)
N6: (13.377,17.001,11.006)
N7: (14.036,17.880,8.057)
N9: (12.966,19.608,7.185)
O5': (15.219,20.293,3.819)
O3': (12.089,23.088,4.892)
C4: (9.789,17.656,7.155)
N3: (10.762,16.724,6.895)
OP1: (6.999,20.027,0.926)
OP2: (6.422,18.542,2.959)
C2: (11.430,16.547,5.728)
C1': (11.838,17.305,3.475)
C3': (10.554,16.421,1.734)
O5': (8.603,18.332,1.895)
O4': (11.503,18.373,2.626)
C5': (9.703,18.753,1.037)
P: (7.400,19.329,2.173)
C4': (10.880,17.878,1.409)
C2': (11.710,16.038,2.665)
O2': (12.949,15.861,1.974)
N1: (11.110,17.451,4.729)
O4: (9.293,17.708,8.287)
O2: (12.304,15.698,5.586)
C6: (10.133,18.411,4.909)
C5: (9.530,18.572,6.091)
O3': (10.669,15.660,0.508)
N3: (10.762,16.724,6.895)
OP1: (6.999,20.027,0.926)
OP2: (6.422,18.542,2.959)
C2: (11.430,16.547,5.728)
C1': (11.838,17.305,3.475)
C3': (10.554,16.421,1.734)
O5': (8.603,18.332,1.895)
O4': (11.503,18.373,2.626)
C5': (9.703,18.753,1.037)
P: (7.400,19.329,2.173)
C4': (10.880,17.878,1.409)
C2': (11.710,16.038,2.665)
O2': (12.949,15.861,1.974)
N1: (11.110,17.451,4.729)
O4: (9.293,17.708,8.287)
O2: (12.304,15.698,5.586)
C6: (10.133,18.411,4.909)
C5: (9.530,18.572,6.091)
O3': (10.669,15.660,0.508)
Image (generated by PyMOL):