Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11229:11228
Extra
PDB:
ATOM 1 O3' C A1228 24.396 10.818 -27.689 1.00144.12 O
ATOM 2 P G A1229 25.547 11.176 -28.759 1.00139.44 P
ATOM 3 OP1 G A1229 25.724 12.651 -28.727 1.00139.19 O
ATOM 4 OP2 G A1229 25.181 10.527 -30.048 1.00139.77 O
ATOM 5 O5' G A1229 26.828 10.463 -28.132 1.00138.51 O
ATOM 6 C5' G A1229 27.111 10.571 -26.737 1.00138.28 C
ATOM 7 C4' G A1229 27.176 9.219 -26.064 1.00138.34 C
ATOM 8 O4' G A1229 25.987 8.458 -26.401 1.00139.31 O
ATOM 9 C3' G A1229 28.363 8.353 -26.458 1.00137.50 C
ATOM 10 O3' G A1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 11 C2' G A1229 27.784 7.407 -27.506 1.00138.02 C
ATOM 12 O2' G A1229 28.453 6.166 -27.609 1.00137.60 O
ATOM 13 C1' G A1229 26.347 7.233 -27.019 1.00139.13 C
ATOM 14 N9 G A1229 25.387 6.985 -28.095 1.00139.89 N
ATOM 15 C8 G A1229 25.373 7.629 -29.302 1.00139.85 C
ATOM 16 N7 G A1229 24.397 7.250 -30.075 1.00140.63 N
ATOM 17 C5 G A1229 23.722 6.302 -29.328 1.00141.22 C
ATOM 18 C6 G A1229 22.577 5.539 -29.654 1.00142.16 C
ATOM 19 O6 G A1229 21.908 5.544 -30.693 1.00142.68 O
ATOM 20 N1 G A1229 22.223 4.697 -28.613 1.00142.50 N
ATOM 21 C2 G A1229 22.878 4.594 -27.412 1.00142.00 C
ATOM 22 N2 G A1229 22.367 3.718 -26.534 1.00142.47 N
ATOM 23 N3 G A1229 23.953 5.298 -27.096 1.00141.12 N
ATOM 24 C4 G A1229 24.316 6.127 -28.097 1.00140.78 C
ATOM 25 P A A1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 26 OP1 A A1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 27 OP2 A A1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 28 O5' A A1230 30.441 6.455 -23.828 1.00133.90 O
TER
ATOM 1 O3' C B1227 20.260 12.241 -32.157 1.00155.36 O
ATOM 2 P C B1228 21.551 11.301 -32.360 1.00146.28 P
ATOM 3 OP1 C B1228 22.602 12.133 -32.999 1.00145.41 O
ATOM 4 OP2 C B1228 21.093 10.070 -33.061 1.00146.73 O
ATOM 5 O5' C B1228 21.971 10.951 -30.855 1.00145.98 O
ATOM 6 C5' C B1228 22.238 11.981 -29.903 1.00145.69 C
ATOM 7 C4' C B1228 22.160 11.472 -28.475 1.00145.79 C
ATOM 8 O4' C B1228 20.837 10.938 -28.215 1.00146.84 O
ATOM 9 C3' C B1228 23.122 10.342 -28.103 1.00145.14 C
ATOM 10 O3' C B1228 24.396 10.818 -27.689 1.00144.12 O
ATOM 11 C2' C B1228 22.384 9.585 -26.995 1.00145.76 C
ATOM 12 O2' C B1228 22.664 10.143 -25.719 1.00145.50 O
ATOM 13 C1' C B1228 20.912 9.843 -27.328 1.00146.87 C
ATOM 14 N1 C B1228 20.265 8.678 -27.963 1.00147.46 N
ATOM 15 C2 C B1228 20.048 7.498 -27.236 1.00147.72 C
ATOM 16 O2 C B1228 20.410 7.408 -26.046 1.00147.45 O
ATOM 17 N3 C B1228 19.442 6.468 -27.872 1.00148.27 N
ATOM 18 C4 C B1228 19.058 6.582 -29.148 1.00148.56 C
ATOM 19 N4 C B1228 18.464 5.540 -29.732 1.00149.10 N
ATOM 20 C5 C B1228 19.271 7.768 -29.897 1.00148.30 C
ATOM 21 C6 C B1228 19.861 8.783 -29.264 1.00147.76 C
ATOM 22 P G B1229 25.547 11.176 -28.759 1.00139.44 P
ATOM 23 OP1 G B1229 25.724 12.651 -28.727 1.00139.19 O
ATOM 24 OP2 G B1229 25.181 10.527 -30.048 1.00139.77 O
ATOM 25 O5' G B1229 26.828 10.463 -28.132 1.00138.51 O
TER
ATOM 2 P G A1229 25.547 11.176 -28.759 1.00139.44 P
ATOM 3 OP1 G A1229 25.724 12.651 -28.727 1.00139.19 O
ATOM 4 OP2 G A1229 25.181 10.527 -30.048 1.00139.77 O
ATOM 5 O5' G A1229 26.828 10.463 -28.132 1.00138.51 O
ATOM 6 C5' G A1229 27.111 10.571 -26.737 1.00138.28 C
ATOM 7 C4' G A1229 27.176 9.219 -26.064 1.00138.34 C
ATOM 8 O4' G A1229 25.987 8.458 -26.401 1.00139.31 O
ATOM 9 C3' G A1229 28.363 8.353 -26.458 1.00137.50 C
ATOM 10 O3' G A1229 28.801 7.604 -25.334 1.00137.22 O
ATOM 11 C2' G A1229 27.784 7.407 -27.506 1.00138.02 C
ATOM 12 O2' G A1229 28.453 6.166 -27.609 1.00137.60 O
ATOM 13 C1' G A1229 26.347 7.233 -27.019 1.00139.13 C
ATOM 14 N9 G A1229 25.387 6.985 -28.095 1.00139.89 N
ATOM 15 C8 G A1229 25.373 7.629 -29.302 1.00139.85 C
ATOM 16 N7 G A1229 24.397 7.250 -30.075 1.00140.63 N
ATOM 17 C5 G A1229 23.722 6.302 -29.328 1.00141.22 C
ATOM 18 C6 G A1229 22.577 5.539 -29.654 1.00142.16 C
ATOM 19 O6 G A1229 21.908 5.544 -30.693 1.00142.68 O
ATOM 20 N1 G A1229 22.223 4.697 -28.613 1.00142.50 N
ATOM 21 C2 G A1229 22.878 4.594 -27.412 1.00142.00 C
ATOM 22 N2 G A1229 22.367 3.718 -26.534 1.00142.47 N
ATOM 23 N3 G A1229 23.953 5.298 -27.096 1.00141.12 N
ATOM 24 C4 G A1229 24.316 6.127 -28.097 1.00140.78 C
ATOM 25 P A A1230 30.338 7.178 -25.241 1.00133.92 P
ATOM 26 OP1 A A1230 31.133 8.434 -25.224 1.00133.22 O
ATOM 27 OP2 A A1230 30.578 6.189 -26.331 1.00133.82 O
ATOM 28 O5' A A1230 30.441 6.455 -23.828 1.00133.90 O
TER
ATOM 1 O3' C B1227 20.260 12.241 -32.157 1.00155.36 O
ATOM 2 P C B1228 21.551 11.301 -32.360 1.00146.28 P
ATOM 3 OP1 C B1228 22.602 12.133 -32.999 1.00145.41 O
ATOM 4 OP2 C B1228 21.093 10.070 -33.061 1.00146.73 O
ATOM 5 O5' C B1228 21.971 10.951 -30.855 1.00145.98 O
ATOM 6 C5' C B1228 22.238 11.981 -29.903 1.00145.69 C
ATOM 7 C4' C B1228 22.160 11.472 -28.475 1.00145.79 C
ATOM 8 O4' C B1228 20.837 10.938 -28.215 1.00146.84 O
ATOM 9 C3' C B1228 23.122 10.342 -28.103 1.00145.14 C
ATOM 10 O3' C B1228 24.396 10.818 -27.689 1.00144.12 O
ATOM 11 C2' C B1228 22.384 9.585 -26.995 1.00145.76 C
ATOM 12 O2' C B1228 22.664 10.143 -25.719 1.00145.50 O
ATOM 13 C1' C B1228 20.912 9.843 -27.328 1.00146.87 C
ATOM 14 N1 C B1228 20.265 8.678 -27.963 1.00147.46 N
ATOM 15 C2 C B1228 20.048 7.498 -27.236 1.00147.72 C
ATOM 16 O2 C B1228 20.410 7.408 -26.046 1.00147.45 O
ATOM 17 N3 C B1228 19.442 6.468 -27.872 1.00148.27 N
ATOM 18 C4 C B1228 19.058 6.582 -29.148 1.00148.56 C
ATOM 19 N4 C B1228 18.464 5.540 -29.732 1.00149.10 N
ATOM 20 C5 C B1228 19.271 7.768 -29.897 1.00148.30 C
ATOM 21 C6 C B1228 19.861 8.783 -29.264 1.00147.76 C
ATOM 22 P G B1229 25.547 11.176 -28.759 1.00139.44 P
ATOM 23 OP1 G B1229 25.724 12.651 -28.727 1.00139.19 O
ATOM 24 OP2 G B1229 25.181 10.527 -30.048 1.00139.77 O
ATOM 25 O5' G B1229 26.828 10.463 -28.132 1.00138.51 O
TER
Atoms:
OP1: (25.724,12.651,-28.727)
OP2: (25.181,10.527,-30.048)
C3': (28.363,8.353,-26.458)
C1': (26.347,7.233,-27.019)
C5': (27.111,10.571,-26.737)
O6: (21.908,5.544,-30.693)
O4': (25.987,8.458,-26.401)
C8: (25.373,7.629,-29.302)
C2: (22.878,4.594,-27.412)
C6: (22.577,5.539,-29.654)
C5: (23.722,6.302,-29.328)
C4: (24.316,6.127,-28.097)
P: (25.547,11.176,-28.759)
C4': (27.176,9.219,-26.064)
C2': (27.784,7.407,-27.506)
O2': (28.453,6.166,-27.609)
N1: (22.223,4.697,-28.613)
N2: (22.367,3.718,-26.534)
N3: (23.953,5.298,-27.096)
N7: (24.397,7.250,-30.075)
N9: (25.387,6.985,-28.095)
O5': (26.828,10.463,-28.132)
O3': (28.801,7.604,-25.334)
OP2: (25.181,10.527,-30.048)
C3': (28.363,8.353,-26.458)
C1': (26.347,7.233,-27.019)
C5': (27.111,10.571,-26.737)
O6: (21.908,5.544,-30.693)
O4': (25.987,8.458,-26.401)
C8: (25.373,7.629,-29.302)
C2: (22.878,4.594,-27.412)
C6: (22.577,5.539,-29.654)
C5: (23.722,6.302,-29.328)
C4: (24.316,6.127,-28.097)
P: (25.547,11.176,-28.759)
C4': (27.176,9.219,-26.064)
C2': (27.784,7.407,-27.506)
O2': (28.453,6.166,-27.609)
N1: (22.223,4.697,-28.613)
N2: (22.367,3.718,-26.534)
N3: (23.953,5.298,-27.096)
N7: (24.397,7.250,-30.075)
N9: (25.387,6.985,-28.095)
O5': (26.828,10.463,-28.132)
O3': (28.801,7.604,-25.334)
C2: (20.048,7.498,-27.236)
OP1: (22.602,12.133,-32.999)
OP2: (21.093,10.070,-33.061)
C4: (19.058,6.582,-29.148)
O5': (21.971,10.951,-30.855)
C3': (23.122,10.342,-28.103)
C1': (20.912,9.843,-27.328)
O4': (20.837,10.938,-28.215)
C5': (22.238,11.981,-29.903)
P: (21.551,11.301,-32.360)
O2: (20.410,7.408,-26.046)
C4': (22.160,11.472,-28.475)
C2': (22.384,9.585,-26.995)
O2': (22.664,10.143,-25.719)
N1: (20.265,8.678,-27.963)
N3: (19.442,6.468,-27.872)
N4: (18.464,5.540,-29.732)
C6: (19.861,8.783,-29.264)
C5: (19.271,7.768,-29.897)
O3': (24.396,10.818,-27.689)
OP1: (22.602,12.133,-32.999)
OP2: (21.093,10.070,-33.061)
C4: (19.058,6.582,-29.148)
O5': (21.971,10.951,-30.855)
C3': (23.122,10.342,-28.103)
C1': (20.912,9.843,-27.328)
O4': (20.837,10.938,-28.215)
C5': (22.238,11.981,-29.903)
P: (21.551,11.301,-32.360)
O2: (20.410,7.408,-26.046)
C4': (22.160,11.472,-28.475)
C2': (22.384,9.585,-26.995)
O2': (22.664,10.143,-25.719)
N1: (20.265,8.678,-27.963)
N3: (19.442,6.468,-27.872)
N4: (18.464,5.540,-29.732)
C6: (19.861,8.783,-29.264)
C5: (19.271,7.768,-29.897)
O3': (24.396,10.818,-27.689)
Image (generated by PyMOL):