Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0345:0347
Extra
PDB:
ATOM 1 O3' C A 344 53.298 120.458 15.349 1.00 62.98 O
ATOM 2 P A A 345 54.278 120.053 14.137 1.00 65.04 P
ATOM 3 OP1 A A 345 53.445 119.611 12.988 1.00 65.00 O
ATOM 4 OP2 A A 345 55.336 119.151 14.667 1.00 63.60 O
ATOM 5 O5' A A 345 54.963 121.423 13.723 1.00 65.21 O
ATOM 6 C5' A A 345 56.094 121.443 12.847 1.00 66.95 C
ATOM 7 C4' A A 345 56.152 122.759 12.123 1.00 68.48 C
ATOM 8 O4' A A 345 55.102 122.801 11.116 1.00 69.26 O
ATOM 9 C3' A A 345 55.945 123.981 13.011 1.00 69.20 C
ATOM 10 O3' A A 345 56.770 125.039 12.542 1.00 71.26 O
ATOM 11 C2' A A 345 54.460 124.287 12.808 1.00 69.25 C
ATOM 12 O2' A A 345 54.108 125.636 13.050 1.00 68.17 O
ATOM 13 C1' A A 345 54.281 123.930 11.335 1.00 68.90 C
ATOM 14 N9 A A 345 52.909 123.596 10.947 1.00 68.98 N
ATOM 15 C8 A A 345 52.159 122.499 11.302 1.00 68.94 C
ATOM 16 N7 A A 345 50.949 122.497 10.793 1.00 69.13 N
ATOM 17 C5 A A 345 50.894 123.670 10.051 1.00 69.24 C
ATOM 18 C6 A A 345 49.874 124.258 9.270 1.00 68.64 C
ATOM 19 N6 A A 345 48.663 123.722 9.103 1.00 67.52 N
ATOM 20 N1 A A 345 50.147 125.433 8.659 1.00 68.56 N
ATOM 21 C2 A A 345 51.362 125.976 8.826 1.00 68.93 C
ATOM 22 N3 A A 345 52.400 125.525 9.533 1.00 69.34 N
ATOM 23 C4 A A 345 52.098 124.355 10.131 1.00 69.95 C
ATOM 24 P G A 346 58.149 125.366 13.300 1.00 72.05 P
ATOM 25 OP1 G A 346 58.479 124.202 14.156 1.00 72.51 O
ATOM 26 OP2 G A 346 58.023 126.714 13.907 1.00 72.10 O
ATOM 27 O5' G A 346 59.237 125.413 12.133 1.00 73.72 O
TER
ATOM 1 O3' G B 346 59.079 123.301 8.599 1.00 78.22 O
ATOM 2 P U B 347 59.982 122.165 7.900 1.00 79.22 P
ATOM 3 OP1 U B 347 61.294 122.036 8.597 1.00 79.47 O
ATOM 4 OP2 U B 347 59.950 122.430 6.436 1.00 80.04 O
ATOM 5 O5' U B 347 59.137 120.831 8.128 1.00 78.36 O
ATOM 6 C5' U B 347 59.167 120.113 9.382 1.00 75.62 C
ATOM 7 C4' U B 347 57.817 119.482 9.655 1.00 74.59 C
ATOM 8 O4' U B 347 56.859 120.517 9.985 1.00 73.86 O
ATOM 9 C3' U B 347 57.184 118.736 8.489 1.00 74.85 C
ATOM 10 O3' U B 347 57.693 117.404 8.397 1.00 77.40 O
ATOM 11 C2' U B 347 55.695 118.782 8.825 1.00 73.43 C
ATOM 12 O2' U B 347 55.279 117.786 9.737 1.00 72.64 O
ATOM 13 C1' U B 347 55.577 120.148 9.508 1.00 72.36 C
ATOM 14 N1 U B 347 55.037 121.244 8.687 1.00 70.87 N
ATOM 15 C2 U B 347 53.685 121.218 8.395 1.00 70.25 C
ATOM 16 O2 U B 347 52.947 120.313 8.746 1.00 71.19 O
ATOM 17 N3 U B 347 53.227 122.291 7.672 1.00 70.10 N
ATOM 18 C4 U B 347 53.963 123.363 7.214 1.00 70.05 C
ATOM 19 O4 U B 347 53.392 124.271 6.606 1.00 70.30 O
ATOM 20 C5 U B 347 55.358 123.309 7.535 1.00 69.62 C
ATOM 21 C6 U B 347 55.836 122.278 8.239 1.00 70.14 C
ATOM 22 P A B 348 57.770 116.666 6.967 1.00 78.45 P
ATOM 23 OP1 A B 348 58.425 115.349 7.192 1.00 78.86 O
ATOM 24 OP2 A B 348 58.346 117.605 5.975 1.00 78.04 O
ATOM 25 O5' A B 348 56.244 116.414 6.586 1.00 77.98 O
TER
ATOM 2 P A A 345 54.278 120.053 14.137 1.00 65.04 P
ATOM 3 OP1 A A 345 53.445 119.611 12.988 1.00 65.00 O
ATOM 4 OP2 A A 345 55.336 119.151 14.667 1.00 63.60 O
ATOM 5 O5' A A 345 54.963 121.423 13.723 1.00 65.21 O
ATOM 6 C5' A A 345 56.094 121.443 12.847 1.00 66.95 C
ATOM 7 C4' A A 345 56.152 122.759 12.123 1.00 68.48 C
ATOM 8 O4' A A 345 55.102 122.801 11.116 1.00 69.26 O
ATOM 9 C3' A A 345 55.945 123.981 13.011 1.00 69.20 C
ATOM 10 O3' A A 345 56.770 125.039 12.542 1.00 71.26 O
ATOM 11 C2' A A 345 54.460 124.287 12.808 1.00 69.25 C
ATOM 12 O2' A A 345 54.108 125.636 13.050 1.00 68.17 O
ATOM 13 C1' A A 345 54.281 123.930 11.335 1.00 68.90 C
ATOM 14 N9 A A 345 52.909 123.596 10.947 1.00 68.98 N
ATOM 15 C8 A A 345 52.159 122.499 11.302 1.00 68.94 C
ATOM 16 N7 A A 345 50.949 122.497 10.793 1.00 69.13 N
ATOM 17 C5 A A 345 50.894 123.670 10.051 1.00 69.24 C
ATOM 18 C6 A A 345 49.874 124.258 9.270 1.00 68.64 C
ATOM 19 N6 A A 345 48.663 123.722 9.103 1.00 67.52 N
ATOM 20 N1 A A 345 50.147 125.433 8.659 1.00 68.56 N
ATOM 21 C2 A A 345 51.362 125.976 8.826 1.00 68.93 C
ATOM 22 N3 A A 345 52.400 125.525 9.533 1.00 69.34 N
ATOM 23 C4 A A 345 52.098 124.355 10.131 1.00 69.95 C
ATOM 24 P G A 346 58.149 125.366 13.300 1.00 72.05 P
ATOM 25 OP1 G A 346 58.479 124.202 14.156 1.00 72.51 O
ATOM 26 OP2 G A 346 58.023 126.714 13.907 1.00 72.10 O
ATOM 27 O5' G A 346 59.237 125.413 12.133 1.00 73.72 O
TER
ATOM 1 O3' G B 346 59.079 123.301 8.599 1.00 78.22 O
ATOM 2 P U B 347 59.982 122.165 7.900 1.00 79.22 P
ATOM 3 OP1 U B 347 61.294 122.036 8.597 1.00 79.47 O
ATOM 4 OP2 U B 347 59.950 122.430 6.436 1.00 80.04 O
ATOM 5 O5' U B 347 59.137 120.831 8.128 1.00 78.36 O
ATOM 6 C5' U B 347 59.167 120.113 9.382 1.00 75.62 C
ATOM 7 C4' U B 347 57.817 119.482 9.655 1.00 74.59 C
ATOM 8 O4' U B 347 56.859 120.517 9.985 1.00 73.86 O
ATOM 9 C3' U B 347 57.184 118.736 8.489 1.00 74.85 C
ATOM 10 O3' U B 347 57.693 117.404 8.397 1.00 77.40 O
ATOM 11 C2' U B 347 55.695 118.782 8.825 1.00 73.43 C
ATOM 12 O2' U B 347 55.279 117.786 9.737 1.00 72.64 O
ATOM 13 C1' U B 347 55.577 120.148 9.508 1.00 72.36 C
ATOM 14 N1 U B 347 55.037 121.244 8.687 1.00 70.87 N
ATOM 15 C2 U B 347 53.685 121.218 8.395 1.00 70.25 C
ATOM 16 O2 U B 347 52.947 120.313 8.746 1.00 71.19 O
ATOM 17 N3 U B 347 53.227 122.291 7.672 1.00 70.10 N
ATOM 18 C4 U B 347 53.963 123.363 7.214 1.00 70.05 C
ATOM 19 O4 U B 347 53.392 124.271 6.606 1.00 70.30 O
ATOM 20 C5 U B 347 55.358 123.309 7.535 1.00 69.62 C
ATOM 21 C6 U B 347 55.836 122.278 8.239 1.00 70.14 C
ATOM 22 P A B 348 57.770 116.666 6.967 1.00 78.45 P
ATOM 23 OP1 A B 348 58.425 115.349 7.192 1.00 78.86 O
ATOM 24 OP2 A B 348 58.346 117.605 5.975 1.00 78.04 O
ATOM 25 O5' A B 348 56.244 116.414 6.586 1.00 77.98 O
TER
Atoms:
OP1: (53.445,119.611,12.988)
OP2: (55.336,119.151,14.667)
C3': (55.945,123.981,13.011)
C1': (54.281,123.930,11.335)
C5': (56.094,121.443,12.847)
O4': (55.102,122.801,11.116)
C8: (52.159,122.499,11.302)
O2': (54.108,125.636,13.050)
C6: (49.874,124.258,9.270)
C5: (50.894,123.670,10.051)
C4: (52.098,124.355,10.131)
P: (54.278,120.053,14.137)
C4': (56.152,122.759,12.123)
C2': (54.460,124.287,12.808)
C2: (51.362,125.976,8.826)
N1: (50.147,125.433,8.659)
N3: (52.400,125.525,9.533)
N6: (48.663,123.722,9.103)
N7: (50.949,122.497,10.793)
N9: (52.909,123.596,10.947)
O5': (54.963,121.423,13.723)
O3': (56.770,125.039,12.542)
OP2: (55.336,119.151,14.667)
C3': (55.945,123.981,13.011)
C1': (54.281,123.930,11.335)
C5': (56.094,121.443,12.847)
O4': (55.102,122.801,11.116)
C8: (52.159,122.499,11.302)
O2': (54.108,125.636,13.050)
C6: (49.874,124.258,9.270)
C5: (50.894,123.670,10.051)
C4: (52.098,124.355,10.131)
P: (54.278,120.053,14.137)
C4': (56.152,122.759,12.123)
C2': (54.460,124.287,12.808)
C2: (51.362,125.976,8.826)
N1: (50.147,125.433,8.659)
N3: (52.400,125.525,9.533)
N6: (48.663,123.722,9.103)
N7: (50.949,122.497,10.793)
N9: (52.909,123.596,10.947)
O5': (54.963,121.423,13.723)
O3': (56.770,125.039,12.542)
C4: (53.963,123.363,7.214)
N3: (53.227,122.291,7.672)
OP1: (61.294,122.036,8.597)
OP2: (59.950,122.430,6.436)
C2: (53.685,121.218,8.395)
C1': (55.577,120.148,9.508)
C3': (57.184,118.736,8.489)
O5': (59.137,120.831,8.128)
O4': (56.859,120.517,9.985)
C5': (59.167,120.113,9.382)
P: (59.982,122.165,7.900)
C4': (57.817,119.482,9.655)
C2': (55.695,118.782,8.825)
O2': (55.279,117.786,9.737)
N1: (55.037,121.244,8.687)
O4: (53.392,124.271,6.606)
O2: (52.947,120.313,8.746)
C6: (55.836,122.278,8.239)
C5: (55.358,123.309,7.535)
O3': (57.693,117.404,8.397)
N3: (53.227,122.291,7.672)
OP1: (61.294,122.036,8.597)
OP2: (59.950,122.430,6.436)
C2: (53.685,121.218,8.395)
C1': (55.577,120.148,9.508)
C3': (57.184,118.736,8.489)
O5': (59.137,120.831,8.128)
O4': (56.859,120.517,9.985)
C5': (59.167,120.113,9.382)
P: (59.982,122.165,7.900)
C4': (57.817,119.482,9.655)
C2': (55.695,118.782,8.825)
O2': (55.279,117.786,9.737)
N1: (55.037,121.244,8.687)
O4: (53.392,124.271,6.606)
O2: (52.947,120.313,8.746)
C6: (55.836,122.278,8.239)
C5: (55.358,123.309,7.535)
O3': (57.693,117.404,8.397)
Image (generated by PyMOL):