Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12593:12592
Extra
PDB:
ATOM 1 O3' C A2592 -9.407 1.026 17.941 1.00 62.10 O
ATOM 2 P G A2593 -10.499 1.495 16.844 1.00 59.68 P
ATOM 3 OP1 G A2593 -11.844 1.531 17.539 1.00 59.83 O
ATOM 4 OP2 G A2593 -10.332 0.630 15.645 1.00 60.00 O
ATOM 5 O5' G A2593 -10.029 2.967 16.482 1.00 59.78 O
ATOM 6 C5' G A2593 -9.886 3.963 17.474 1.00 59.48 C
ATOM 7 C4' G A2593 -8.956 5.058 17.008 1.00 59.47 C
ATOM 8 O4' G A2593 -7.615 4.539 16.854 1.00 59.11 O
ATOM 9 C3' G A2593 -9.240 5.659 15.643 1.00 60.07 C
ATOM 10 O3' G A2593 -10.347 6.555 15.639 1.00 60.47 O
ATOM 11 C2' G A2593 -7.921 6.327 15.353 1.00 59.87 C
ATOM 12 O2' G A2593 -7.765 7.447 16.194 1.00 59.65 O
ATOM 13 C1' G A2593 -6.960 5.249 15.828 1.00 59.35 C
ATOM 14 N9 G A2593 -6.631 4.312 14.749 1.00 59.56 N
ATOM 15 C8 G A2593 -7.214 3.109 14.459 1.00 59.72 C
ATOM 16 N7 G A2593 -6.684 2.543 13.400 1.00 59.92 N
ATOM 17 C5 G A2593 -5.695 3.420 12.981 1.00 59.87 C
ATOM 18 C6 G A2593 -4.777 3.348 11.896 1.00 60.02 C
ATOM 19 O6 G A2593 -4.684 2.446 11.080 1.00 60.24 O
ATOM 20 N1 G A2593 -3.931 4.455 11.819 1.00 59.92 N
ATOM 21 C2 G A2593 -3.999 5.494 12.718 1.00 59.69 C
ATOM 22 N2 G A2593 -3.166 6.502 12.527 1.00 59.64 N
ATOM 23 N3 G A2593 -4.834 5.582 13.743 1.00 59.55 N
ATOM 24 C4 G A2593 -5.654 4.518 13.813 1.00 59.65 C
ATOM 25 P U A2594 -10.942 7.119 14.262 1.00 90.74 P
ATOM 26 OP1 U A2594 -10.313 6.374 13.154 1.00 90.89 O
ATOM 27 OP2 U A2594 -10.799 8.587 14.299 1.00 90.84 O
ATOM 28 O5' U A2594 -12.465 6.716 14.379 1.00 91.10 O
TER
ATOM 1 O3' G B2591 -7.037 -4.033 15.767 1.00 57.08 O
ATOM 2 P C B2592 -8.053 -3.113 14.917 1.00 62.57 P
ATOM 3 OP1 C B2592 -9.383 -3.786 14.992 1.00 62.89 O
ATOM 4 OP2 C B2592 -7.442 -2.867 13.562 1.00 62.90 O
ATOM 5 O5' C B2592 -8.078 -1.768 15.776 1.00 62.33 O
ATOM 6 C5' C B2592 -8.308 -1.834 17.170 1.00 61.91 C
ATOM 7 C4' C B2592 -7.668 -0.697 17.919 1.00 61.54 C
ATOM 8 O4' C B2592 -6.237 -0.656 17.693 1.00 61.24 O
ATOM 9 C3' C B2592 -8.092 0.703 17.541 1.00 61.86 C
ATOM 10 O3' C B2592 -9.407 1.026 17.941 1.00 62.10 O
ATOM 11 C2' C B2592 -7.014 1.529 18.239 1.00 61.39 C
ATOM 12 O2' C B2592 -7.240 1.579 19.638 1.00 60.99 O
ATOM 13 C1' C B2592 -5.780 0.658 17.998 1.00 61.09 C
ATOM 14 N1 C B2592 -4.949 1.172 16.896 1.00 61.28 N
ATOM 15 C2 C B2592 -4.338 2.432 17.070 1.00 61.14 C
ATOM 16 O2 C B2592 -4.521 3.083 18.112 1.00 60.89 O
ATOM 17 N3 C B2592 -3.562 2.945 16.098 1.00 61.31 N
ATOM 18 C4 C B2592 -3.378 2.245 15.002 1.00 61.60 C
ATOM 19 N4 C B2592 -2.610 2.778 14.073 1.00 61.77 N
ATOM 20 C5 C B2592 -3.965 0.979 14.782 1.00 61.74 C
ATOM 21 C6 C B2592 -4.750 0.473 15.743 1.00 61.58 C
ATOM 22 P G B2593 -10.499 1.495 16.844 1.00 59.68 P
ATOM 23 OP1 G B2593 -11.844 1.531 17.539 1.00 59.83 O
ATOM 24 OP2 G B2593 -10.332 0.630 15.645 1.00 60.00 O
ATOM 25 O5' G B2593 -10.029 2.967 16.482 1.00 59.78 O
TER
ATOM 2 P G A2593 -10.499 1.495 16.844 1.00 59.68 P
ATOM 3 OP1 G A2593 -11.844 1.531 17.539 1.00 59.83 O
ATOM 4 OP2 G A2593 -10.332 0.630 15.645 1.00 60.00 O
ATOM 5 O5' G A2593 -10.029 2.967 16.482 1.00 59.78 O
ATOM 6 C5' G A2593 -9.886 3.963 17.474 1.00 59.48 C
ATOM 7 C4' G A2593 -8.956 5.058 17.008 1.00 59.47 C
ATOM 8 O4' G A2593 -7.615 4.539 16.854 1.00 59.11 O
ATOM 9 C3' G A2593 -9.240 5.659 15.643 1.00 60.07 C
ATOM 10 O3' G A2593 -10.347 6.555 15.639 1.00 60.47 O
ATOM 11 C2' G A2593 -7.921 6.327 15.353 1.00 59.87 C
ATOM 12 O2' G A2593 -7.765 7.447 16.194 1.00 59.65 O
ATOM 13 C1' G A2593 -6.960 5.249 15.828 1.00 59.35 C
ATOM 14 N9 G A2593 -6.631 4.312 14.749 1.00 59.56 N
ATOM 15 C8 G A2593 -7.214 3.109 14.459 1.00 59.72 C
ATOM 16 N7 G A2593 -6.684 2.543 13.400 1.00 59.92 N
ATOM 17 C5 G A2593 -5.695 3.420 12.981 1.00 59.87 C
ATOM 18 C6 G A2593 -4.777 3.348 11.896 1.00 60.02 C
ATOM 19 O6 G A2593 -4.684 2.446 11.080 1.00 60.24 O
ATOM 20 N1 G A2593 -3.931 4.455 11.819 1.00 59.92 N
ATOM 21 C2 G A2593 -3.999 5.494 12.718 1.00 59.69 C
ATOM 22 N2 G A2593 -3.166 6.502 12.527 1.00 59.64 N
ATOM 23 N3 G A2593 -4.834 5.582 13.743 1.00 59.55 N
ATOM 24 C4 G A2593 -5.654 4.518 13.813 1.00 59.65 C
ATOM 25 P U A2594 -10.942 7.119 14.262 1.00 90.74 P
ATOM 26 OP1 U A2594 -10.313 6.374 13.154 1.00 90.89 O
ATOM 27 OP2 U A2594 -10.799 8.587 14.299 1.00 90.84 O
ATOM 28 O5' U A2594 -12.465 6.716 14.379 1.00 91.10 O
TER
ATOM 1 O3' G B2591 -7.037 -4.033 15.767 1.00 57.08 O
ATOM 2 P C B2592 -8.053 -3.113 14.917 1.00 62.57 P
ATOM 3 OP1 C B2592 -9.383 -3.786 14.992 1.00 62.89 O
ATOM 4 OP2 C B2592 -7.442 -2.867 13.562 1.00 62.90 O
ATOM 5 O5' C B2592 -8.078 -1.768 15.776 1.00 62.33 O
ATOM 6 C5' C B2592 -8.308 -1.834 17.170 1.00 61.91 C
ATOM 7 C4' C B2592 -7.668 -0.697 17.919 1.00 61.54 C
ATOM 8 O4' C B2592 -6.237 -0.656 17.693 1.00 61.24 O
ATOM 9 C3' C B2592 -8.092 0.703 17.541 1.00 61.86 C
ATOM 10 O3' C B2592 -9.407 1.026 17.941 1.00 62.10 O
ATOM 11 C2' C B2592 -7.014 1.529 18.239 1.00 61.39 C
ATOM 12 O2' C B2592 -7.240 1.579 19.638 1.00 60.99 O
ATOM 13 C1' C B2592 -5.780 0.658 17.998 1.00 61.09 C
ATOM 14 N1 C B2592 -4.949 1.172 16.896 1.00 61.28 N
ATOM 15 C2 C B2592 -4.338 2.432 17.070 1.00 61.14 C
ATOM 16 O2 C B2592 -4.521 3.083 18.112 1.00 60.89 O
ATOM 17 N3 C B2592 -3.562 2.945 16.098 1.00 61.31 N
ATOM 18 C4 C B2592 -3.378 2.245 15.002 1.00 61.60 C
ATOM 19 N4 C B2592 -2.610 2.778 14.073 1.00 61.77 N
ATOM 20 C5 C B2592 -3.965 0.979 14.782 1.00 61.74 C
ATOM 21 C6 C B2592 -4.750 0.473 15.743 1.00 61.58 C
ATOM 22 P G B2593 -10.499 1.495 16.844 1.00 59.68 P
ATOM 23 OP1 G B2593 -11.844 1.531 17.539 1.00 59.83 O
ATOM 24 OP2 G B2593 -10.332 0.630 15.645 1.00 60.00 O
ATOM 25 O5' G B2593 -10.029 2.967 16.482 1.00 59.78 O
TER
Atoms:
OP1: (-11.844,1.531,17.539)
OP2: (-10.332,0.630,15.645)
C3': (-9.240,5.659,15.643)
C1': (-6.960,5.249,15.828)
C5': (-9.886,3.963,17.474)
O6: (-4.684,2.446,11.080)
O4': (-7.615,4.539,16.854)
C8: (-7.214,3.109,14.459)
C2: (-3.999,5.494,12.718)
C6: (-4.777,3.348,11.896)
C5: (-5.695,3.420,12.981)
C4: (-5.654,4.518,13.813)
P: (-10.499,1.495,16.844)
C4': (-8.956,5.058,17.008)
C2': (-7.921,6.327,15.353)
O2': (-7.765,7.447,16.194)
N1: (-3.931,4.455,11.819)
N2: (-3.166,6.502,12.527)
N3: (-4.834,5.582,13.743)
N7: (-6.684,2.543,13.400)
N9: (-6.631,4.312,14.749)
O5': (-10.029,2.967,16.482)
O3': (-10.347,6.555,15.639)
OP2: (-10.332,0.630,15.645)
C3': (-9.240,5.659,15.643)
C1': (-6.960,5.249,15.828)
C5': (-9.886,3.963,17.474)
O6: (-4.684,2.446,11.080)
O4': (-7.615,4.539,16.854)
C8: (-7.214,3.109,14.459)
C2: (-3.999,5.494,12.718)
C6: (-4.777,3.348,11.896)
C5: (-5.695,3.420,12.981)
C4: (-5.654,4.518,13.813)
P: (-10.499,1.495,16.844)
C4': (-8.956,5.058,17.008)
C2': (-7.921,6.327,15.353)
O2': (-7.765,7.447,16.194)
N1: (-3.931,4.455,11.819)
N2: (-3.166,6.502,12.527)
N3: (-4.834,5.582,13.743)
N7: (-6.684,2.543,13.400)
N9: (-6.631,4.312,14.749)
O5': (-10.029,2.967,16.482)
O3': (-10.347,6.555,15.639)
C2: (-4.338,2.432,17.070)
OP1: (-9.383,-3.786,14.992)
OP2: (-7.442,-2.867,13.562)
C4: (-3.378,2.245,15.002)
O5': (-8.078,-1.768,15.776)
C3': (-8.092,0.703,17.541)
C1': (-5.780,0.658,17.998)
O4': (-6.237,-0.656,17.693)
C5': (-8.308,-1.834,17.170)
P: (-8.053,-3.113,14.917)
O2: (-4.521,3.083,18.112)
C4': (-7.668,-0.697,17.919)
C2': (-7.014,1.529,18.239)
O2': (-7.240,1.579,19.638)
N1: (-4.949,1.172,16.896)
N3: (-3.562,2.945,16.098)
N4: (-2.610,2.778,14.073)
C6: (-4.750,0.473,15.743)
C5: (-3.965,0.979,14.782)
O3': (-9.407,1.026,17.941)
OP1: (-9.383,-3.786,14.992)
OP2: (-7.442,-2.867,13.562)
C4: (-3.378,2.245,15.002)
O5': (-8.078,-1.768,15.776)
C3': (-8.092,0.703,17.541)
C1': (-5.780,0.658,17.998)
O4': (-6.237,-0.656,17.693)
C5': (-8.308,-1.834,17.170)
P: (-8.053,-3.113,14.917)
O2: (-4.521,3.083,18.112)
C4': (-7.668,-0.697,17.919)
C2': (-7.014,1.529,18.239)
O2': (-7.240,1.579,19.638)
N1: (-4.949,1.172,16.896)
N3: (-3.562,2.945,16.098)
N4: (-2.610,2.778,14.073)
C6: (-4.750,0.473,15.743)
C5: (-3.965,0.979,14.782)
O3': (-9.407,1.026,17.941)
Image (generated by PyMOL):