Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1960:A1959
Extra
PDB:
ATOM 1 O3' C A1959 -37.576 120.725 123.783 1.00 0.33 O
ATOM 2 P G A1960 -37.485 122.196 123.146 1.00 0.07 P
ATOM 3 OP1 G A1960 -36.569 122.994 124.006 1.00 0.07 O
ATOM 4 OP2 G A1960 -38.894 122.688 122.942 1.00 0.07 O
ATOM 5 O5' G A1960 -36.803 121.901 121.757 1.00 0.07 O
ATOM 6 C5' G A1960 -35.624 121.147 121.718 1.00 0.07 C
ATOM 7 C4' G A1960 -35.225 120.851 120.316 1.00 0.07 C
ATOM 8 O4' G A1960 -35.956 119.704 119.835 1.00 0.07 O
ATOM 9 C3' G A1960 -35.536 121.913 119.295 1.00 0.07 C
ATOM 10 O3' G A1960 -34.617 122.983 119.333 1.00 0.07 O
ATOM 11 C2' G A1960 -35.443 121.098 118.032 1.00 0.07 C
ATOM 12 O2' G A1960 -34.089 120.760 117.773 1.00 0.07 O
ATOM 13 C1' G A1960 -36.159 119.832 118.461 1.00 0.07 C
ATOM 14 N9 G A1960 -37.589 119.912 118.225 1.00 0.01 N
ATOM 15 C8 G A1960 -38.520 120.396 119.089 1.00 0.01 C
ATOM 16 N7 G A1960 -39.730 120.361 118.613 1.00 0.01 N
ATOM 17 C5 G A1960 -39.550 119.801 117.371 1.00 0.01 C
ATOM 18 C6 G A1960 -40.502 119.505 116.396 1.00 0.01 C
ATOM 19 O6 G A1960 -41.709 119.695 116.469 1.00 0.01 O
ATOM 20 N1 G A1960 -39.934 118.958 115.271 1.00 0.01 N
ATOM 21 C2 G A1960 -38.610 118.728 115.112 1.00 0.01 C
ATOM 22 N2 G A1960 -38.298 118.192 113.941 1.00 0.01 N
ATOM 23 N3 G A1960 -37.684 118.981 116.009 1.00 0.01 N
ATOM 24 C4 G A1960 -38.238 119.512 117.111 1.00 0.01 C
ATOM 25 P A A1961 -35.078 124.482 119.003 1.00 0.01 P
ATOM 26 OP1 A A1961 -34.149 125.381 119.737 1.00 0.01 O
ATOM 27 OP2 A A1961 -36.533 124.553 119.279 1.00 0.01 O
ATOM 28 O5' A A1961 -34.825 124.624 117.441 1.00 0.01 O
TER
ATOM 1 O3' A B1958 -44.061 119.550 125.059 1.00 5.56 O
ATOM 2 P C B1959 -43.011 118.571 124.385 1.00 0.33 P
ATOM 3 OP1 C B1959 -43.154 118.699 122.911 1.00 0.33 O
ATOM 4 OP2 C B1959 -43.218 117.227 125.035 1.00 0.33 O
ATOM 5 O5' C B1959 -41.626 119.202 124.869 1.00 0.33 O
ATOM 6 C5' C B1959 -40.725 119.824 123.969 1.00 0.33 C
ATOM 7 C4' C B1959 -39.415 119.108 123.981 1.00 0.33 C
ATOM 8 O4' C B1959 -39.616 117.790 123.457 1.00 0.33 O
ATOM 9 C3' C B1959 -38.303 119.702 123.121 1.00 0.33 C
ATOM 10 O3' C B1959 -37.576 120.725 123.783 1.00 0.33 O
ATOM 11 C2' C B1959 -37.459 118.490 122.813 1.00 0.33 C
ATOM 12 O2' C B1959 -36.645 118.150 123.945 1.00 0.33 O
ATOM 13 C1' C B1959 -38.536 117.424 122.652 1.00 0.33 C
ATOM 14 N1 C B1959 -39.019 117.292 121.259 1.00 0.27 N
ATOM 15 C2 C B1959 -38.097 116.985 120.288 1.00 0.27 C
ATOM 16 O2 C B1959 -36.925 116.921 120.686 1.00 0.27 O
ATOM 17 N3 C B1959 -38.506 116.800 119.007 1.00 0.27 N
ATOM 18 C4 C B1959 -39.799 116.902 118.682 1.00 0.27 C
ATOM 19 N4 C B1959 -40.181 116.732 117.401 1.00 0.27 N
ATOM 20 C5 C B1959 -40.774 117.195 119.679 1.00 0.27 C
ATOM 21 C6 C B1959 -40.346 117.369 120.937 1.00 0.27 C
ATOM 22 P G B1960 -37.485 122.196 123.146 1.00 0.07 P
ATOM 23 OP1 G B1960 -36.569 122.994 124.006 1.00 0.07 O
ATOM 24 OP2 G B1960 -38.894 122.688 122.942 1.00 0.07 O
ATOM 25 O5' G B1960 -36.803 121.901 121.757 1.00 0.07 O
TER
ATOM 2 P G A1960 -37.485 122.196 123.146 1.00 0.07 P
ATOM 3 OP1 G A1960 -36.569 122.994 124.006 1.00 0.07 O
ATOM 4 OP2 G A1960 -38.894 122.688 122.942 1.00 0.07 O
ATOM 5 O5' G A1960 -36.803 121.901 121.757 1.00 0.07 O
ATOM 6 C5' G A1960 -35.624 121.147 121.718 1.00 0.07 C
ATOM 7 C4' G A1960 -35.225 120.851 120.316 1.00 0.07 C
ATOM 8 O4' G A1960 -35.956 119.704 119.835 1.00 0.07 O
ATOM 9 C3' G A1960 -35.536 121.913 119.295 1.00 0.07 C
ATOM 10 O3' G A1960 -34.617 122.983 119.333 1.00 0.07 O
ATOM 11 C2' G A1960 -35.443 121.098 118.032 1.00 0.07 C
ATOM 12 O2' G A1960 -34.089 120.760 117.773 1.00 0.07 O
ATOM 13 C1' G A1960 -36.159 119.832 118.461 1.00 0.07 C
ATOM 14 N9 G A1960 -37.589 119.912 118.225 1.00 0.01 N
ATOM 15 C8 G A1960 -38.520 120.396 119.089 1.00 0.01 C
ATOM 16 N7 G A1960 -39.730 120.361 118.613 1.00 0.01 N
ATOM 17 C5 G A1960 -39.550 119.801 117.371 1.00 0.01 C
ATOM 18 C6 G A1960 -40.502 119.505 116.396 1.00 0.01 C
ATOM 19 O6 G A1960 -41.709 119.695 116.469 1.00 0.01 O
ATOM 20 N1 G A1960 -39.934 118.958 115.271 1.00 0.01 N
ATOM 21 C2 G A1960 -38.610 118.728 115.112 1.00 0.01 C
ATOM 22 N2 G A1960 -38.298 118.192 113.941 1.00 0.01 N
ATOM 23 N3 G A1960 -37.684 118.981 116.009 1.00 0.01 N
ATOM 24 C4 G A1960 -38.238 119.512 117.111 1.00 0.01 C
ATOM 25 P A A1961 -35.078 124.482 119.003 1.00 0.01 P
ATOM 26 OP1 A A1961 -34.149 125.381 119.737 1.00 0.01 O
ATOM 27 OP2 A A1961 -36.533 124.553 119.279 1.00 0.01 O
ATOM 28 O5' A A1961 -34.825 124.624 117.441 1.00 0.01 O
TER
ATOM 1 O3' A B1958 -44.061 119.550 125.059 1.00 5.56 O
ATOM 2 P C B1959 -43.011 118.571 124.385 1.00 0.33 P
ATOM 3 OP1 C B1959 -43.154 118.699 122.911 1.00 0.33 O
ATOM 4 OP2 C B1959 -43.218 117.227 125.035 1.00 0.33 O
ATOM 5 O5' C B1959 -41.626 119.202 124.869 1.00 0.33 O
ATOM 6 C5' C B1959 -40.725 119.824 123.969 1.00 0.33 C
ATOM 7 C4' C B1959 -39.415 119.108 123.981 1.00 0.33 C
ATOM 8 O4' C B1959 -39.616 117.790 123.457 1.00 0.33 O
ATOM 9 C3' C B1959 -38.303 119.702 123.121 1.00 0.33 C
ATOM 10 O3' C B1959 -37.576 120.725 123.783 1.00 0.33 O
ATOM 11 C2' C B1959 -37.459 118.490 122.813 1.00 0.33 C
ATOM 12 O2' C B1959 -36.645 118.150 123.945 1.00 0.33 O
ATOM 13 C1' C B1959 -38.536 117.424 122.652 1.00 0.33 C
ATOM 14 N1 C B1959 -39.019 117.292 121.259 1.00 0.27 N
ATOM 15 C2 C B1959 -38.097 116.985 120.288 1.00 0.27 C
ATOM 16 O2 C B1959 -36.925 116.921 120.686 1.00 0.27 O
ATOM 17 N3 C B1959 -38.506 116.800 119.007 1.00 0.27 N
ATOM 18 C4 C B1959 -39.799 116.902 118.682 1.00 0.27 C
ATOM 19 N4 C B1959 -40.181 116.732 117.401 1.00 0.27 N
ATOM 20 C5 C B1959 -40.774 117.195 119.679 1.00 0.27 C
ATOM 21 C6 C B1959 -40.346 117.369 120.937 1.00 0.27 C
ATOM 22 P G B1960 -37.485 122.196 123.146 1.00 0.07 P
ATOM 23 OP1 G B1960 -36.569 122.994 124.006 1.00 0.07 O
ATOM 24 OP2 G B1960 -38.894 122.688 122.942 1.00 0.07 O
ATOM 25 O5' G B1960 -36.803 121.901 121.757 1.00 0.07 O
TER
Atoms:
OP1: (-36.569,122.994,124.006)
OP2: (-38.894,122.688,122.942)
C3': (-35.536,121.913,119.295)
C1': (-36.159,119.832,118.461)
C5': (-35.624,121.147,121.718)
O6: (-41.709,119.695,116.469)
O4': (-35.956,119.704,119.835)
C8: (-38.520,120.396,119.089)
C2: (-38.610,118.728,115.112)
C6: (-40.502,119.505,116.396)
C5: (-39.550,119.801,117.371)
C4: (-38.238,119.512,117.111)
P: (-37.485,122.196,123.146)
C4': (-35.225,120.851,120.316)
C2': (-35.443,121.098,118.032)
O2': (-34.089,120.760,117.773)
N1: (-39.934,118.958,115.271)
N2: (-38.298,118.192,113.941)
N3: (-37.684,118.981,116.009)
N7: (-39.730,120.361,118.613)
N9: (-37.589,119.912,118.225)
O5': (-36.803,121.901,121.757)
O3': (-34.617,122.983,119.333)
OP2: (-38.894,122.688,122.942)
C3': (-35.536,121.913,119.295)
C1': (-36.159,119.832,118.461)
C5': (-35.624,121.147,121.718)
O6: (-41.709,119.695,116.469)
O4': (-35.956,119.704,119.835)
C8: (-38.520,120.396,119.089)
C2: (-38.610,118.728,115.112)
C6: (-40.502,119.505,116.396)
C5: (-39.550,119.801,117.371)
C4: (-38.238,119.512,117.111)
P: (-37.485,122.196,123.146)
C4': (-35.225,120.851,120.316)
C2': (-35.443,121.098,118.032)
O2': (-34.089,120.760,117.773)
N1: (-39.934,118.958,115.271)
N2: (-38.298,118.192,113.941)
N3: (-37.684,118.981,116.009)
N7: (-39.730,120.361,118.613)
N9: (-37.589,119.912,118.225)
O5': (-36.803,121.901,121.757)
O3': (-34.617,122.983,119.333)
C2: (-38.097,116.985,120.288)
OP1: (-43.154,118.699,122.911)
OP2: (-43.218,117.227,125.035)
C4: (-39.799,116.902,118.682)
O5': (-41.626,119.202,124.869)
C3': (-38.303,119.702,123.121)
C1': (-38.536,117.424,122.652)
O4': (-39.616,117.790,123.457)
C5': (-40.725,119.824,123.969)
P: (-43.011,118.571,124.385)
O2: (-36.925,116.921,120.686)
C4': (-39.415,119.108,123.981)
C2': (-37.459,118.490,122.813)
O2': (-36.645,118.150,123.945)
N1: (-39.019,117.292,121.259)
N3: (-38.506,116.800,119.007)
N4: (-40.181,116.732,117.401)
C6: (-40.346,117.369,120.937)
C5: (-40.774,117.195,119.679)
O3': (-37.576,120.725,123.783)
OP1: (-43.154,118.699,122.911)
OP2: (-43.218,117.227,125.035)
C4: (-39.799,116.902,118.682)
O5': (-41.626,119.202,124.869)
C3': (-38.303,119.702,123.121)
C1': (-38.536,117.424,122.652)
O4': (-39.616,117.790,123.457)
C5': (-40.725,119.824,123.969)
P: (-43.011,118.571,124.385)
O2: (-36.925,116.921,120.686)
C4': (-39.415,119.108,123.981)
C2': (-37.459,118.490,122.813)
O2': (-36.645,118.150,123.945)
N1: (-39.019,117.292,121.259)
N3: (-38.506,116.800,119.007)
N4: (-40.181,116.732,117.401)
C6: (-40.346,117.369,120.937)
C5: (-40.774,117.195,119.679)
O3': (-37.576,120.725,123.783)
Image (generated by PyMOL):