Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A235:A253
Extra
PDB:
ATOM 1 O3' G A 234 93.817 117.941 -7.895 1.00 54.27 O
ATOM 2 P A A 235 94.494 118.969 -8.916 1.00 53.69 P
ATOM 3 OP1 A A 235 94.134 118.474 -10.261 1.00 54.00 O
ATOM 4 OP2 A A 235 95.928 119.196 -8.571 1.00 50.98 O
ATOM 5 O5' A A 235 93.689 120.314 -8.669 1.00 51.69 O
ATOM 6 C5' A A 235 92.320 120.429 -9.057 1.00 50.30 C
ATOM 7 C4' A A 235 91.687 121.566 -8.316 1.00 50.05 C
ATOM 8 O4' A A 235 91.606 121.225 -6.906 1.00 50.58 O
ATOM 9 C3' A A 235 92.509 122.848 -8.378 1.00 49.35 C
ATOM 10 O3' A A 235 91.648 123.957 -8.207 1.00 48.95 O
ATOM 11 C2' A A 235 93.375 122.735 -7.137 1.00 49.09 C
ATOM 12 O2' A A 235 93.868 123.981 -6.698 1.00 47.64 O
ATOM 13 C1' A A 235 92.353 122.165 -6.159 1.00 50.46 C
ATOM 14 N9 A A 235 92.927 121.498 -5.000 1.00 50.66 N
ATOM 15 C8 A A 235 93.635 120.324 -4.935 1.00 51.04 C
ATOM 16 N7 A A 235 94.011 120.004 -3.723 1.00 50.72 N
ATOM 17 C5 A A 235 93.513 121.035 -2.939 1.00 50.63 C
ATOM 18 C6 A A 235 93.572 121.283 -1.568 1.00 50.34 C
ATOM 19 N6 A A 235 94.176 120.476 -0.701 1.00 49.80 N
ATOM 20 N1 A A 235 92.979 122.405 -1.108 1.00 50.65 N
ATOM 21 C2 A A 235 92.369 123.214 -1.982 1.00 50.78 C
ATOM 22 N3 A A 235 92.244 123.086 -3.292 1.00 50.78 N
ATOM 23 C4 A A 235 92.846 121.961 -3.714 1.00 50.57 C
ATOM 24 P A A 236 91.065 124.697 -9.489 1.00 50.06 P
ATOM 25 OP1 A A 236 92.122 124.579 -10.523 1.00 50.02 O
ATOM 26 OP2 A A 236 90.539 126.034 -9.105 1.00 49.39 O
ATOM 27 O5' A A 236 89.812 123.817 -9.906 1.00 48.37 O
TER
ATOM 1 O3' G B 252 91.283 119.546 3.341 1.00 41.49 O
ATOM 2 P U B 253 89.993 119.390 4.291 1.00 41.65 P
ATOM 3 OP1 U B 253 90.344 119.953 5.611 1.00 42.04 O
ATOM 4 OP2 U B 253 89.483 118.000 4.201 1.00 42.43 O
ATOM 5 O5' U B 253 88.917 120.343 3.626 1.00 40.47 O
ATOM 6 C5' U B 253 88.851 121.729 3.969 1.00 41.94 C
ATOM 7 C4' U B 253 88.412 122.523 2.764 1.00 42.69 C
ATOM 8 O4' U B 253 89.514 122.641 1.826 1.00 43.18 O
ATOM 9 C3' U B 253 87.305 121.873 1.953 1.00 42.91 C
ATOM 10 O3' U B 253 86.016 122.091 2.501 1.00 41.23 O
ATOM 11 C2' U B 253 87.492 122.498 0.582 1.00 42.56 C
ATOM 12 O2' U B 253 86.951 123.799 0.505 1.00 43.61 O
ATOM 13 C1' U B 253 89.019 122.571 0.497 1.00 43.01 C
ATOM 14 N1 U B 253 89.642 121.418 -0.180 1.00 43.31 N
ATOM 15 C2 U B 253 89.485 121.310 -1.560 1.00 43.80 C
ATOM 16 O2 U B 253 88.851 122.118 -2.228 1.00 44.71 O
ATOM 17 N3 U B 253 90.099 120.222 -2.127 1.00 44.39 N
ATOM 18 C4 U B 253 90.834 119.254 -1.484 1.00 43.92 C
ATOM 19 O4 U B 253 91.281 118.308 -2.135 1.00 44.24 O
ATOM 20 C5 U B 253 90.952 119.433 -0.068 1.00 43.18 C
ATOM 21 C6 U B 253 90.363 120.477 0.520 1.00 42.01 C
ATOM 22 P G B 254 84.974 120.871 2.549 1.00 41.11 P
ATOM 23 OP1 G B 254 83.671 121.410 3.010 1.00 38.29 O
ATOM 24 OP2 G B 254 85.619 119.753 3.287 1.00 38.71 O
ATOM 25 O5' G B 254 84.819 120.441 1.018 1.00 41.20 O
TER
ATOM 2 P A A 235 94.494 118.969 -8.916 1.00 53.69 P
ATOM 3 OP1 A A 235 94.134 118.474 -10.261 1.00 54.00 O
ATOM 4 OP2 A A 235 95.928 119.196 -8.571 1.00 50.98 O
ATOM 5 O5' A A 235 93.689 120.314 -8.669 1.00 51.69 O
ATOM 6 C5' A A 235 92.320 120.429 -9.057 1.00 50.30 C
ATOM 7 C4' A A 235 91.687 121.566 -8.316 1.00 50.05 C
ATOM 8 O4' A A 235 91.606 121.225 -6.906 1.00 50.58 O
ATOM 9 C3' A A 235 92.509 122.848 -8.378 1.00 49.35 C
ATOM 10 O3' A A 235 91.648 123.957 -8.207 1.00 48.95 O
ATOM 11 C2' A A 235 93.375 122.735 -7.137 1.00 49.09 C
ATOM 12 O2' A A 235 93.868 123.981 -6.698 1.00 47.64 O
ATOM 13 C1' A A 235 92.353 122.165 -6.159 1.00 50.46 C
ATOM 14 N9 A A 235 92.927 121.498 -5.000 1.00 50.66 N
ATOM 15 C8 A A 235 93.635 120.324 -4.935 1.00 51.04 C
ATOM 16 N7 A A 235 94.011 120.004 -3.723 1.00 50.72 N
ATOM 17 C5 A A 235 93.513 121.035 -2.939 1.00 50.63 C
ATOM 18 C6 A A 235 93.572 121.283 -1.568 1.00 50.34 C
ATOM 19 N6 A A 235 94.176 120.476 -0.701 1.00 49.80 N
ATOM 20 N1 A A 235 92.979 122.405 -1.108 1.00 50.65 N
ATOM 21 C2 A A 235 92.369 123.214 -1.982 1.00 50.78 C
ATOM 22 N3 A A 235 92.244 123.086 -3.292 1.00 50.78 N
ATOM 23 C4 A A 235 92.846 121.961 -3.714 1.00 50.57 C
ATOM 24 P A A 236 91.065 124.697 -9.489 1.00 50.06 P
ATOM 25 OP1 A A 236 92.122 124.579 -10.523 1.00 50.02 O
ATOM 26 OP2 A A 236 90.539 126.034 -9.105 1.00 49.39 O
ATOM 27 O5' A A 236 89.812 123.817 -9.906 1.00 48.37 O
TER
ATOM 1 O3' G B 252 91.283 119.546 3.341 1.00 41.49 O
ATOM 2 P U B 253 89.993 119.390 4.291 1.00 41.65 P
ATOM 3 OP1 U B 253 90.344 119.953 5.611 1.00 42.04 O
ATOM 4 OP2 U B 253 89.483 118.000 4.201 1.00 42.43 O
ATOM 5 O5' U B 253 88.917 120.343 3.626 1.00 40.47 O
ATOM 6 C5' U B 253 88.851 121.729 3.969 1.00 41.94 C
ATOM 7 C4' U B 253 88.412 122.523 2.764 1.00 42.69 C
ATOM 8 O4' U B 253 89.514 122.641 1.826 1.00 43.18 O
ATOM 9 C3' U B 253 87.305 121.873 1.953 1.00 42.91 C
ATOM 10 O3' U B 253 86.016 122.091 2.501 1.00 41.23 O
ATOM 11 C2' U B 253 87.492 122.498 0.582 1.00 42.56 C
ATOM 12 O2' U B 253 86.951 123.799 0.505 1.00 43.61 O
ATOM 13 C1' U B 253 89.019 122.571 0.497 1.00 43.01 C
ATOM 14 N1 U B 253 89.642 121.418 -0.180 1.00 43.31 N
ATOM 15 C2 U B 253 89.485 121.310 -1.560 1.00 43.80 C
ATOM 16 O2 U B 253 88.851 122.118 -2.228 1.00 44.71 O
ATOM 17 N3 U B 253 90.099 120.222 -2.127 1.00 44.39 N
ATOM 18 C4 U B 253 90.834 119.254 -1.484 1.00 43.92 C
ATOM 19 O4 U B 253 91.281 118.308 -2.135 1.00 44.24 O
ATOM 20 C5 U B 253 90.952 119.433 -0.068 1.00 43.18 C
ATOM 21 C6 U B 253 90.363 120.477 0.520 1.00 42.01 C
ATOM 22 P G B 254 84.974 120.871 2.549 1.00 41.11 P
ATOM 23 OP1 G B 254 83.671 121.410 3.010 1.00 38.29 O
ATOM 24 OP2 G B 254 85.619 119.753 3.287 1.00 38.71 O
ATOM 25 O5' G B 254 84.819 120.441 1.018 1.00 41.20 O
TER
Atoms:
OP1: (94.134,118.474,-10.261)
OP2: (95.928,119.196,-8.571)
C3': (92.509,122.848,-8.378)
C1': (92.353,122.165,-6.159)
C5': (92.320,120.429,-9.057)
O4': (91.606,121.225,-6.906)
C8: (93.635,120.324,-4.935)
O2': (93.868,123.981,-6.698)
C6: (93.572,121.283,-1.568)
C5: (93.513,121.035,-2.939)
C4: (92.846,121.961,-3.714)
P: (94.494,118.969,-8.916)
C4': (91.687,121.566,-8.316)
C2': (93.375,122.735,-7.137)
C2: (92.369,123.214,-1.982)
N1: (92.979,122.405,-1.108)
N3: (92.244,123.086,-3.292)
N6: (94.176,120.476,-0.701)
N7: (94.011,120.004,-3.723)
N9: (92.927,121.498,-5.000)
O5': (93.689,120.314,-8.669)
O3': (91.648,123.957,-8.207)
OP2: (95.928,119.196,-8.571)
C3': (92.509,122.848,-8.378)
C1': (92.353,122.165,-6.159)
C5': (92.320,120.429,-9.057)
O4': (91.606,121.225,-6.906)
C8: (93.635,120.324,-4.935)
O2': (93.868,123.981,-6.698)
C6: (93.572,121.283,-1.568)
C5: (93.513,121.035,-2.939)
C4: (92.846,121.961,-3.714)
P: (94.494,118.969,-8.916)
C4': (91.687,121.566,-8.316)
C2': (93.375,122.735,-7.137)
C2: (92.369,123.214,-1.982)
N1: (92.979,122.405,-1.108)
N3: (92.244,123.086,-3.292)
N6: (94.176,120.476,-0.701)
N7: (94.011,120.004,-3.723)
N9: (92.927,121.498,-5.000)
O5': (93.689,120.314,-8.669)
O3': (91.648,123.957,-8.207)
C4: (90.834,119.254,-1.484)
N3: (90.099,120.222,-2.127)
OP1: (90.344,119.953,5.611)
OP2: (89.483,118.000,4.201)
C2: (89.485,121.310,-1.560)
C1': (89.019,122.571,0.497)
C3': (87.305,121.873,1.953)
O5': (88.917,120.343,3.626)
O4': (89.514,122.641,1.826)
C5': (88.851,121.729,3.969)
P: (89.993,119.390,4.291)
C4': (88.412,122.523,2.764)
C2': (87.492,122.498,0.582)
O2': (86.951,123.799,0.505)
N1: (89.642,121.418,-0.180)
O4: (91.281,118.308,-2.135)
O2: (88.851,122.118,-2.228)
C6: (90.363,120.477,0.520)
C5: (90.952,119.433,-0.068)
O3': (86.016,122.091,2.501)
N3: (90.099,120.222,-2.127)
OP1: (90.344,119.953,5.611)
OP2: (89.483,118.000,4.201)
C2: (89.485,121.310,-1.560)
C1': (89.019,122.571,0.497)
C3': (87.305,121.873,1.953)
O5': (88.917,120.343,3.626)
O4': (89.514,122.641,1.826)
C5': (88.851,121.729,3.969)
P: (89.993,119.390,4.291)
C4': (88.412,122.523,2.764)
C2': (87.492,122.498,0.582)
O2': (86.951,123.799,0.505)
N1: (89.642,121.418,-0.180)
O4: (91.281,118.308,-2.135)
O2: (88.851,122.118,-2.228)
C6: (90.363,120.477,0.520)
C5: (90.952,119.433,-0.068)
O3': (86.016,122.091,2.501)
Image (generated by PyMOL):