ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0345:0347

Extra

PDB:
ATOM 1 O3' C A 344 52.548 119.521 15.299 1.00 89.29 O
ATOM 2 P A A 345 53.536 119.109 14.094 1.00 90.15 P
ATOM 3 OP1 A A 345 52.710 118.679 12.931 1.00 89.26 O
ATOM 4 OP2 A A 345 54.577 118.195 14.640 1.00 89.73 O
ATOM 5 O5' A A 345 54.249 120.473 13.696 1.00 90.93 O
ATOM 6 C5' A A 345 55.416 120.484 12.861 1.00 90.78 C
ATOM 7 C4' A A 345 55.472 121.767 12.075 1.00 90.65 C
ATOM 8 O4' A A 345 54.461 121.733 11.030 1.00 90.86 O
ATOM 9 C3' A A 345 55.207 123.032 12.885 1.00 91.23 C
ATOM 10 O3' A A 345 56.014 124.081 12.370 1.00 93.05 O
ATOM 11 C2' A A 345 53.723 123.289 12.618 1.00 90.89 C
ATOM 12 O2' A A 345 53.326 124.638 12.763 1.00 91.01 O
ATOM 13 C1' A A 345 53.601 122.847 11.163 1.00 90.47 C
ATOM 14 N9 A A 345 52.253 122.448 10.753 1.00 90.23 N
ATOM 15 C8 A A 345 51.563 121.300 11.070 1.00 89.56 C
ATOM 16 N7 A A 345 50.367 121.236 10.532 1.00 89.55 N
ATOM 17 C5 A A 345 50.259 122.420 9.812 1.00 89.59 C
ATOM 18 C6 A A 345 49.228 122.959 9.010 1.00 89.25 C
ATOM 19 N6 A A 345 48.063 122.348 8.780 1.00 88.60 N
ATOM 20 N1 A A 345 49.443 124.165 8.439 1.00 89.47 N
ATOM 21 C2 A A 345 50.613 124.778 8.656 1.00 89.58 C
ATOM 22 N3 A A 345 51.656 124.377 9.382 1.00 90.21 N
ATOM 23 C4 A A 345 51.413 123.177 9.941 1.00 90.21 C
ATOM 24 P G A 346 57.443 124.396 13.044 1.00 94.26 P
ATOM 25 OP1 G A 346 57.853 123.229 13.866 1.00 94.51 O
ATOM 26 OP2 G A 346 57.368 125.744 13.665 1.00 94.40 O
ATOM 27 O5' G A 346 58.438 124.466 11.802 1.00 95.55 O
TER

ATOM 1 O3' G B 346 58.120 122.339 8.268 1.00 94.69 O
ATOM 2 P U B 347 59.060 121.236 7.567 1.00 94.11 P
ATOM 3 OP1 U B 347 60.381 121.181 8.252 1.00 92.98 O
ATOM 4 OP2 U B 347 59.001 121.475 6.102 1.00 94.19 O
ATOM 5 O5' U B 347 58.286 119.867 7.820 1.00 94.29 O
ATOM 6 C5' U B 347 58.344 119.190 9.094 1.00 94.59 C
ATOM 7 C4' U B 347 56.994 118.596 9.426 1.00 94.34 C
ATOM 8 O4' U B 347 56.056 119.667 9.695 1.00 93.64 O
ATOM 9 C3' U B 347 56.347 117.795 8.306 1.00 95.19 C
ATOM 10 O3' U B 347 56.832 116.454 8.300 1.00 97.56 O
ATOM 11 C2' U B 347 54.862 117.879 8.644 1.00 93.87 C
ATOM 12 O2' U B 347 54.456 116.927 9.605 1.00 93.83 O
ATOM 13 C1' U B 347 54.761 119.281 9.260 1.00 92.99 C
ATOM 14 N1 U B 347 54.194 120.349 8.414 1.00 90.84 N
ATOM 15 C2 U B 347 52.892 120.189 7.964 1.00 90.21 C
ATOM 16 O2 U B 347 52.227 119.190 8.192 1.00 90.72 O
ATOM 17 N3 U B 347 52.394 121.247 7.243 1.00 89.91 N
ATOM 18 C4 U B 347 53.044 122.423 6.926 1.00 89.04 C
ATOM 19 O4 U B 347 52.442 123.295 6.292 1.00 86.95 O
ATOM 20 C5 U B 347 54.397 122.499 7.390 1.00 88.77 C
ATOM 21 C6 U B 347 54.916 121.485 8.093 1.00 89.45 C
ATOM 22 P A B 348 57.034 115.674 6.904 1.00 99.75 P
ATOM 23 OP1 A B 348 57.642 114.359 7.263 1.00 99.22 O
ATOM 24 OP2 A B 348 57.738 116.565 5.942 1.00 98.22 O
ATOM 25 O5' A B 348 55.544 115.433 6.377 1.00 97.71 O
TER

Atoms:
OP1: (52.710,118.679,12.931)
OP2: (54.577,118.195,14.640)
C3': (55.207,123.032,12.885)
C1': (53.601,122.847,11.163)
C5': (55.416,120.484,12.861)
O4': (54.461,121.733,11.030)
C8: (51.563,121.300,11.070)
O2': (53.326,124.638,12.763)
C6: (49.228,122.959,9.010)
C5: (50.259,122.420,9.812)
C4: (51.413,123.177,9.941)
P: (53.536,119.109,14.094)
C4': (55.472,121.767,12.075)
C2': (53.723,123.289,12.618)
C2: (50.613,124.778,8.656)
N1: (49.443,124.165,8.439)
N3: (51.656,124.377,9.382)
N6: (48.063,122.348,8.780)
N7: (50.367,121.236,10.532)
N9: (52.253,122.448,10.753)
O5': (54.249,120.473,13.696)
O3': (56.014,124.081,12.370)
C4: (53.044,122.423,6.926)
N3: (52.394,121.247,7.243)
OP1: (60.381,121.181,8.252)
OP2: (59.001,121.475,6.102)
C2: (52.892,120.189,7.964)
C1': (54.761,119.281,9.260)
C3': (56.347,117.795,8.306)
O5': (58.286,119.867,7.820)
O4': (56.056,119.667,9.695)
C5': (58.344,119.190,9.094)
P: (59.060,121.236,7.567)
C4': (56.994,118.596,9.426)
C2': (54.862,117.879,8.644)
O2': (54.456,116.927,9.605)
N1: (54.194,120.349,8.414)
O4: (52.442,123.295,6.292)
O2: (52.227,119.190,8.192)
C6: (54.916,121.485,8.093)
C5: (54.397,122.499,7.390)
O3': (56.832,116.454,8.300)
Image (generated by PyMOL):
PyMOL image
show in jmol