Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW6:A7:A9
Extra
PDB:
ATOM 1 O3' U A 6 -1.553 55.041 -14.501 1.00 8.05 O
ATOM 2 P A A 7 -0.689 53.698 -14.421 1.00 9.09 P
ATOM 3 OP1 A A 7 -1.276 52.823 -13.384 1.00 9.69 O
ATOM 4 OP2 A A 7 0.733 54.115 -14.343 1.00 10.01 O
ATOM 5 O5' A A 7 -0.984 53.036 -15.846 1.00 8.69 O
ATOM 6 C5' A A 7 -0.259 51.879 -16.254 1.00 9.28 C
ATOM 7 C4' A A 7 -1.176 50.850 -16.892 1.00 9.17 C
ATOM 8 O4' A A 7 -2.018 50.259 -15.869 1.00 8.97 O
ATOM 9 C3' A A 7 -2.126 51.373 -17.967 1.00 9.85 C
ATOM 10 C2' A A 7 -3.421 51.558 -17.190 1.00 8.99 C
ATOM 11 O2' A A 7 -4.571 51.521 -18.016 1.00 9.85 O
ATOM 12 C1' A A 7 -3.360 50.331 -16.286 1.00 8.58 C
ATOM 13 N9 A A 7 -4.196 50.451 -15.102 1.00 8.37 N
ATOM 14 C8 A A 7 -3.968 51.241 -14.011 1.00 8.57 C
ATOM 15 N7 A A 7 -4.902 51.155 -13.097 1.00 8.17 N
ATOM 16 C5 A A 7 -5.803 50.250 -13.631 1.00 8.39 C
ATOM 17 C6 A A 7 -7.016 49.731 -13.144 1.00 9.16 C
ATOM 18 N6 A A 7 -7.538 50.085 -11.964 1.00 9.64 N
ATOM 19 N1 A A 7 -7.669 48.844 -13.924 1.00 9.42 N
ATOM 20 C2 A A 7 -7.140 48.506 -15.105 1.00 9.67 C
ATOM 21 N3 A A 7 -6.008 48.925 -15.667 1.00 9.08 N
ATOM 22 C4 A A 7 -5.384 49.804 -14.868 1.00 8.45 C
ATOM 23 O3' A A 7 -2.319 50.397 -18.977 0.55 11.46 O
ATOM 24 P G A 8 -1.350 50.238 -20.237 1.00 11.44 P
ATOM 25 OP1 G A 8 0.043 50.519 -19.826 1.00 15.48 O
ATOM 26 OP2 G A 8 -1.961 50.939 -21.380 1.00 14.36 O
ATOM 27 O5' G A 8 -1.574 48.691 -20.602 1.00 14.95 O
TER
ATOM 1 O3' G B 8 -0.187 46.057 -16.923 1.00 10.90 O
ATOM 2 P U B 9 0.938 45.277 -16.104 1.00 10.80 P
ATOM 3 OP1 U B 9 2.118 45.079 -16.973 1.00 12.06 O
ATOM 4 OP2 U B 9 0.306 44.123 -15.428 1.00 10.72 O
ATOM 5 O5' U B 9 1.266 46.327 -14.946 1.00 10.69 O
ATOM 6 C5' U B 9 2.025 47.497 -15.190 1.00 10.65 C
ATOM 7 C4' U B 9 1.690 48.528 -14.131 1.00 10.42 C
ATOM 8 O4' U B 9 0.404 49.107 -14.452 1.00 10.23 O
ATOM 9 C3' U B 9 1.527 47.967 -12.726 1.00 9.63 C
ATOM 10 O3' U B 9 2.778 47.971 -12.059 1.00 10.44 O
ATOM 11 C2' U B 9 0.563 48.961 -12.094 1.00 9.95 C
ATOM 12 O2' U B 9 1.240 50.125 -11.662 1.00 10.03 O
ATOM 13 C1' U B 9 -0.347 49.292 -13.271 1.00 9.82 C
ATOM 14 N1 U B 9 -1.591 48.471 -13.369 1.00 9.74 N
ATOM 15 C2 U B 9 -2.514 48.569 -12.353 1.00 9.21 C
ATOM 16 O2 U B 9 -2.341 49.274 -11.376 1.00 9.46 O
ATOM 17 N3 U B 9 -3.643 47.806 -12.520 1.00 9.30 N
ATOM 18 C4 U B 9 -3.936 46.975 -13.585 1.00 9.38 C
ATOM 19 O4 U B 9 -4.994 46.353 -13.587 1.00 10.25 O
ATOM 20 C5 U B 9 -2.930 46.932 -14.616 1.00 9.94 C
ATOM 21 C6 U B 9 -1.820 47.669 -14.470 1.00 9.65 C
ATOM 22 P A B 10 3.169 46.779 -11.076 1.00 10.69 P
ATOM 23 OP1 A B 10 4.513 47.093 -10.546 1.00 11.57 O
ATOM 24 OP2 A B 10 2.916 45.489 -11.748 1.00 11.28 O
ATOM 25 O5' A B 10 2.100 46.882 -9.900 1.00 9.94 O
TER
ATOM 2 P A A 7 -0.689 53.698 -14.421 1.00 9.09 P
ATOM 3 OP1 A A 7 -1.276 52.823 -13.384 1.00 9.69 O
ATOM 4 OP2 A A 7 0.733 54.115 -14.343 1.00 10.01 O
ATOM 5 O5' A A 7 -0.984 53.036 -15.846 1.00 8.69 O
ATOM 6 C5' A A 7 -0.259 51.879 -16.254 1.00 9.28 C
ATOM 7 C4' A A 7 -1.176 50.850 -16.892 1.00 9.17 C
ATOM 8 O4' A A 7 -2.018 50.259 -15.869 1.00 8.97 O
ATOM 9 C3' A A 7 -2.126 51.373 -17.967 1.00 9.85 C
ATOM 10 C2' A A 7 -3.421 51.558 -17.190 1.00 8.99 C
ATOM 11 O2' A A 7 -4.571 51.521 -18.016 1.00 9.85 O
ATOM 12 C1' A A 7 -3.360 50.331 -16.286 1.00 8.58 C
ATOM 13 N9 A A 7 -4.196 50.451 -15.102 1.00 8.37 N
ATOM 14 C8 A A 7 -3.968 51.241 -14.011 1.00 8.57 C
ATOM 15 N7 A A 7 -4.902 51.155 -13.097 1.00 8.17 N
ATOM 16 C5 A A 7 -5.803 50.250 -13.631 1.00 8.39 C
ATOM 17 C6 A A 7 -7.016 49.731 -13.144 1.00 9.16 C
ATOM 18 N6 A A 7 -7.538 50.085 -11.964 1.00 9.64 N
ATOM 19 N1 A A 7 -7.669 48.844 -13.924 1.00 9.42 N
ATOM 20 C2 A A 7 -7.140 48.506 -15.105 1.00 9.67 C
ATOM 21 N3 A A 7 -6.008 48.925 -15.667 1.00 9.08 N
ATOM 22 C4 A A 7 -5.384 49.804 -14.868 1.00 8.45 C
ATOM 23 O3' A A 7 -2.319 50.397 -18.977 0.55 11.46 O
ATOM 24 P G A 8 -1.350 50.238 -20.237 1.00 11.44 P
ATOM 25 OP1 G A 8 0.043 50.519 -19.826 1.00 15.48 O
ATOM 26 OP2 G A 8 -1.961 50.939 -21.380 1.00 14.36 O
ATOM 27 O5' G A 8 -1.574 48.691 -20.602 1.00 14.95 O
TER
ATOM 1 O3' G B 8 -0.187 46.057 -16.923 1.00 10.90 O
ATOM 2 P U B 9 0.938 45.277 -16.104 1.00 10.80 P
ATOM 3 OP1 U B 9 2.118 45.079 -16.973 1.00 12.06 O
ATOM 4 OP2 U B 9 0.306 44.123 -15.428 1.00 10.72 O
ATOM 5 O5' U B 9 1.266 46.327 -14.946 1.00 10.69 O
ATOM 6 C5' U B 9 2.025 47.497 -15.190 1.00 10.65 C
ATOM 7 C4' U B 9 1.690 48.528 -14.131 1.00 10.42 C
ATOM 8 O4' U B 9 0.404 49.107 -14.452 1.00 10.23 O
ATOM 9 C3' U B 9 1.527 47.967 -12.726 1.00 9.63 C
ATOM 10 O3' U B 9 2.778 47.971 -12.059 1.00 10.44 O
ATOM 11 C2' U B 9 0.563 48.961 -12.094 1.00 9.95 C
ATOM 12 O2' U B 9 1.240 50.125 -11.662 1.00 10.03 O
ATOM 13 C1' U B 9 -0.347 49.292 -13.271 1.00 9.82 C
ATOM 14 N1 U B 9 -1.591 48.471 -13.369 1.00 9.74 N
ATOM 15 C2 U B 9 -2.514 48.569 -12.353 1.00 9.21 C
ATOM 16 O2 U B 9 -2.341 49.274 -11.376 1.00 9.46 O
ATOM 17 N3 U B 9 -3.643 47.806 -12.520 1.00 9.30 N
ATOM 18 C4 U B 9 -3.936 46.975 -13.585 1.00 9.38 C
ATOM 19 O4 U B 9 -4.994 46.353 -13.587 1.00 10.25 O
ATOM 20 C5 U B 9 -2.930 46.932 -14.616 1.00 9.94 C
ATOM 21 C6 U B 9 -1.820 47.669 -14.470 1.00 9.65 C
ATOM 22 P A B 10 3.169 46.779 -11.076 1.00 10.69 P
ATOM 23 OP1 A B 10 4.513 47.093 -10.546 1.00 11.57 O
ATOM 24 OP2 A B 10 2.916 45.489 -11.748 1.00 11.28 O
ATOM 25 O5' A B 10 2.100 46.882 -9.900 1.00 9.94 O
TER
Atoms:
OP1: (-1.276,52.823,-13.384)
OP2: (0.733,54.115,-14.343)
C3': (-2.126,51.373,-17.967)
C1': (-3.360,50.331,-16.286)
C5': (-0.259,51.879,-16.254)
O4': (-2.018,50.259,-15.869)
C8: (-3.968,51.241,-14.011)
O2': (-4.571,51.521,-18.016)
C6: (-7.016,49.731,-13.144)
C5: (-5.803,50.250,-13.631)
C4: (-5.384,49.804,-14.868)
P: (-0.689,53.698,-14.421)
C4': (-1.176,50.850,-16.892)
C2': (-3.421,51.558,-17.190)
C2: (-7.140,48.506,-15.105)
N1: (-7.669,48.844,-13.924)
N3: (-6.008,48.925,-15.667)
N6: (-7.538,50.085,-11.964)
N7: (-4.902,51.155,-13.097)
N9: (-4.196,50.451,-15.102)
O5': (-0.984,53.036,-15.846)
O3': (-2.319,50.397,-18.977)
OP2: (0.733,54.115,-14.343)
C3': (-2.126,51.373,-17.967)
C1': (-3.360,50.331,-16.286)
C5': (-0.259,51.879,-16.254)
O4': (-2.018,50.259,-15.869)
C8: (-3.968,51.241,-14.011)
O2': (-4.571,51.521,-18.016)
C6: (-7.016,49.731,-13.144)
C5: (-5.803,50.250,-13.631)
C4: (-5.384,49.804,-14.868)
P: (-0.689,53.698,-14.421)
C4': (-1.176,50.850,-16.892)
C2': (-3.421,51.558,-17.190)
C2: (-7.140,48.506,-15.105)
N1: (-7.669,48.844,-13.924)
N3: (-6.008,48.925,-15.667)
N6: (-7.538,50.085,-11.964)
N7: (-4.902,51.155,-13.097)
N9: (-4.196,50.451,-15.102)
O5': (-0.984,53.036,-15.846)
O3': (-2.319,50.397,-18.977)
C4: (-3.936,46.975,-13.585)
N3: (-3.643,47.806,-12.520)
OP1: (2.118,45.079,-16.973)
OP2: (0.306,44.123,-15.428)
C2: (-2.514,48.569,-12.353)
C1': (-0.347,49.292,-13.271)
C3': (1.527,47.967,-12.726)
O5': (1.266,46.327,-14.946)
O4': (0.404,49.107,-14.452)
C5': (2.025,47.497,-15.190)
P: (0.938,45.277,-16.104)
C4': (1.690,48.528,-14.131)
C2': (0.563,48.961,-12.094)
O2': (1.240,50.125,-11.662)
N1: (-1.591,48.471,-13.369)
O4: (-4.994,46.353,-13.587)
O2: (-2.341,49.274,-11.376)
C6: (-1.820,47.669,-14.470)
C5: (-2.930,46.932,-14.616)
O3': (2.778,47.971,-12.059)
N3: (-3.643,47.806,-12.520)
OP1: (2.118,45.079,-16.973)
OP2: (0.306,44.123,-15.428)
C2: (-2.514,48.569,-12.353)
C1': (-0.347,49.292,-13.271)
C3': (1.527,47.967,-12.726)
O5': (1.266,46.327,-14.946)
O4': (0.404,49.107,-14.452)
C5': (2.025,47.497,-15.190)
P: (0.938,45.277,-16.104)
C4': (1.690,48.528,-14.131)
C2': (0.563,48.961,-12.094)
O2': (1.240,50.125,-11.662)
N1: (-1.591,48.471,-13.369)
O4: (-4.994,46.353,-13.587)
O2: (-2.341,49.274,-11.376)
C6: (-1.820,47.669,-14.470)
C5: (-2.930,46.932,-14.616)
O3': (2.778,47.971,-12.059)
Image (generated by PyMOL):