Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1309:A1321
Extra
PDB:
ATOM 1 O3' A A1308 38.348 -29.439 -59.160 1.00 79.22 O
ATOM 2 P A A1309 39.483 -28.690 -60.009 1.00 75.70 P
ATOM 3 OP1 A A1309 39.116 -28.825 -61.435 1.00 71.17 O
ATOM 4 OP2 A A1309 40.801 -29.229 -59.553 1.00 86.66 O
ATOM 5 O5' A A1309 39.318 -27.169 -59.550 1.00 61.08 O
ATOM 6 C5' A A1309 38.414 -26.318 -60.228 1.00 58.44 C
ATOM 7 C4' A A1309 38.554 -24.886 -59.804 1.00 50.60 C
ATOM 8 O4' A A1309 38.283 -24.756 -58.396 1.00 69.02 O
ATOM 9 C3' A A1309 39.925 -24.272 -59.946 1.00 51.99 C
ATOM 10 O3' A A1309 40.239 -23.934 -61.266 1.00 55.33 O
ATOM 11 C2' A A1309 39.829 -23.073 -59.020 1.00 57.56 C
ATOM 12 O2' A A1309 39.066 -22.032 -59.608 1.00 45.11 O
ATOM 13 C1' A A1309 39.027 -23.668 -57.874 1.00 66.86 C
ATOM 14 N9 A A1309 39.911 -24.168 -56.818 1.00 64.54 N
ATOM 15 C8 A A1309 40.538 -25.382 -56.722 1.00 58.43 C
ATOM 16 N7 A A1309 41.272 -25.459 -55.650 1.00 56.37 N
ATOM 17 C5 A A1309 41.112 -24.219 -55.044 1.00 56.77 C
ATOM 18 C6 A A1309 41.623 -23.670 -53.870 1.00 62.02 C
ATOM 19 N6 A A1309 42.449 -24.358 -53.066 1.00 60.54 N
ATOM 20 N1 A A1309 41.257 -22.398 -53.563 1.00 63.07 N
ATOM 21 C2 A A1309 40.430 -21.729 -54.370 1.00 56.94 C
ATOM 22 N3 A A1309 39.883 -22.155 -55.494 1.00 57.98 N
ATOM 23 C4 A A1309 40.279 -23.408 -55.759 1.00 55.56 C
ATOM 24 P G A1310 41.628 -24.389 -61.882 1.00 60.40 P
ATOM 25 OP1 G A1310 41.765 -23.679 -63.179 1.00 68.24 O
ATOM 26 OP2 G A1310 41.650 -25.871 -61.866 1.00 56.93 O
ATOM 27 O5' G A1310 42.682 -23.821 -60.841 1.00 58.67 O
TER
ATOM 1 O3' G B1320 43.147 -23.566 -47.574 1.00 53.03 O
ATOM 2 P U B1321 41.717 -23.754 -46.881 1.00 57.71 P
ATOM 3 OP1 U B1321 41.788 -23.099 -45.546 1.00 44.43 O
ATOM 4 OP2 U B1321 41.382 -25.199 -46.955 1.00 52.84 O
ATOM 5 O5' U B1321 40.758 -22.916 -47.836 1.00 84.15 O
ATOM 6 C5' U B1321 40.870 -21.498 -47.912 1.00 93.35 C
ATOM 7 C4' U B1321 39.827 -20.897 -48.827 1.00101.05 C
ATOM 8 O4' U B1321 40.123 -21.227 -50.215 1.00101.36 O
ATOM 9 C3' U B1321 38.401 -21.390 -48.642 1.00100.05 C
ATOM 10 O3' U B1321 37.749 -20.824 -47.506 1.00103.67 O
ATOM 11 C2' U B1321 37.765 -21.028 -49.985 1.00 87.73 C
ATOM 12 O2' U B1321 37.507 -19.638 -50.053 1.00 90.24 O
ATOM 13 C1' U B1321 38.913 -21.330 -50.949 1.00 92.54 C
ATOM 14 N1 U B1321 38.817 -22.699 -51.566 1.00 83.36 N
ATOM 15 C2 U B1321 37.889 -22.921 -52.579 1.00 77.65 C
ATOM 16 O2 U B1321 37.123 -22.056 -52.967 1.00 88.55 O
ATOM 17 N3 U B1321 37.871 -24.192 -53.120 1.00 65.98 N
ATOM 18 C4 U B1321 38.675 -25.266 -52.783 1.00 68.89 C
ATOM 19 O4 U B1321 38.550 -26.355 -53.346 1.00 62.23 O
ATOM 20 C5 U B1321 39.618 -24.968 -51.752 1.00 70.17 C
ATOM 21 C6 U B1321 39.656 -23.737 -51.207 1.00 81.00 C
ATOM 22 P A B1322 36.847 -21.752 -46.535 1.00 76.12 P
ATOM 23 OP1 A B1322 36.434 -20.915 -45.392 1.00 88.19 O
ATOM 24 OP2 A B1322 37.610 -22.975 -46.264 1.00 87.69 O
ATOM 25 O5' A B1322 35.587 -22.088 -47.452 1.00 62.50 O
TER
ATOM 2 P A A1309 39.483 -28.690 -60.009 1.00 75.70 P
ATOM 3 OP1 A A1309 39.116 -28.825 -61.435 1.00 71.17 O
ATOM 4 OP2 A A1309 40.801 -29.229 -59.553 1.00 86.66 O
ATOM 5 O5' A A1309 39.318 -27.169 -59.550 1.00 61.08 O
ATOM 6 C5' A A1309 38.414 -26.318 -60.228 1.00 58.44 C
ATOM 7 C4' A A1309 38.554 -24.886 -59.804 1.00 50.60 C
ATOM 8 O4' A A1309 38.283 -24.756 -58.396 1.00 69.02 O
ATOM 9 C3' A A1309 39.925 -24.272 -59.946 1.00 51.99 C
ATOM 10 O3' A A1309 40.239 -23.934 -61.266 1.00 55.33 O
ATOM 11 C2' A A1309 39.829 -23.073 -59.020 1.00 57.56 C
ATOM 12 O2' A A1309 39.066 -22.032 -59.608 1.00 45.11 O
ATOM 13 C1' A A1309 39.027 -23.668 -57.874 1.00 66.86 C
ATOM 14 N9 A A1309 39.911 -24.168 -56.818 1.00 64.54 N
ATOM 15 C8 A A1309 40.538 -25.382 -56.722 1.00 58.43 C
ATOM 16 N7 A A1309 41.272 -25.459 -55.650 1.00 56.37 N
ATOM 17 C5 A A1309 41.112 -24.219 -55.044 1.00 56.77 C
ATOM 18 C6 A A1309 41.623 -23.670 -53.870 1.00 62.02 C
ATOM 19 N6 A A1309 42.449 -24.358 -53.066 1.00 60.54 N
ATOM 20 N1 A A1309 41.257 -22.398 -53.563 1.00 63.07 N
ATOM 21 C2 A A1309 40.430 -21.729 -54.370 1.00 56.94 C
ATOM 22 N3 A A1309 39.883 -22.155 -55.494 1.00 57.98 N
ATOM 23 C4 A A1309 40.279 -23.408 -55.759 1.00 55.56 C
ATOM 24 P G A1310 41.628 -24.389 -61.882 1.00 60.40 P
ATOM 25 OP1 G A1310 41.765 -23.679 -63.179 1.00 68.24 O
ATOM 26 OP2 G A1310 41.650 -25.871 -61.866 1.00 56.93 O
ATOM 27 O5' G A1310 42.682 -23.821 -60.841 1.00 58.67 O
TER
ATOM 1 O3' G B1320 43.147 -23.566 -47.574 1.00 53.03 O
ATOM 2 P U B1321 41.717 -23.754 -46.881 1.00 57.71 P
ATOM 3 OP1 U B1321 41.788 -23.099 -45.546 1.00 44.43 O
ATOM 4 OP2 U B1321 41.382 -25.199 -46.955 1.00 52.84 O
ATOM 5 O5' U B1321 40.758 -22.916 -47.836 1.00 84.15 O
ATOM 6 C5' U B1321 40.870 -21.498 -47.912 1.00 93.35 C
ATOM 7 C4' U B1321 39.827 -20.897 -48.827 1.00101.05 C
ATOM 8 O4' U B1321 40.123 -21.227 -50.215 1.00101.36 O
ATOM 9 C3' U B1321 38.401 -21.390 -48.642 1.00100.05 C
ATOM 10 O3' U B1321 37.749 -20.824 -47.506 1.00103.67 O
ATOM 11 C2' U B1321 37.765 -21.028 -49.985 1.00 87.73 C
ATOM 12 O2' U B1321 37.507 -19.638 -50.053 1.00 90.24 O
ATOM 13 C1' U B1321 38.913 -21.330 -50.949 1.00 92.54 C
ATOM 14 N1 U B1321 38.817 -22.699 -51.566 1.00 83.36 N
ATOM 15 C2 U B1321 37.889 -22.921 -52.579 1.00 77.65 C
ATOM 16 O2 U B1321 37.123 -22.056 -52.967 1.00 88.55 O
ATOM 17 N3 U B1321 37.871 -24.192 -53.120 1.00 65.98 N
ATOM 18 C4 U B1321 38.675 -25.266 -52.783 1.00 68.89 C
ATOM 19 O4 U B1321 38.550 -26.355 -53.346 1.00 62.23 O
ATOM 20 C5 U B1321 39.618 -24.968 -51.752 1.00 70.17 C
ATOM 21 C6 U B1321 39.656 -23.737 -51.207 1.00 81.00 C
ATOM 22 P A B1322 36.847 -21.752 -46.535 1.00 76.12 P
ATOM 23 OP1 A B1322 36.434 -20.915 -45.392 1.00 88.19 O
ATOM 24 OP2 A B1322 37.610 -22.975 -46.264 1.00 87.69 O
ATOM 25 O5' A B1322 35.587 -22.088 -47.452 1.00 62.50 O
TER
Atoms:
OP1: (39.116,-28.825,-61.435)
OP2: (40.801,-29.229,-59.553)
C3': (39.925,-24.272,-59.946)
C1': (39.027,-23.668,-57.874)
C5': (38.414,-26.318,-60.228)
O4': (38.283,-24.756,-58.396)
C8: (40.538,-25.382,-56.722)
O2': (39.066,-22.032,-59.608)
C6: (41.623,-23.670,-53.870)
C5: (41.112,-24.219,-55.044)
C4: (40.279,-23.408,-55.759)
P: (39.483,-28.690,-60.009)
C4': (38.554,-24.886,-59.804)
C2': (39.829,-23.073,-59.020)
C2: (40.430,-21.729,-54.370)
N1: (41.257,-22.398,-53.563)
N3: (39.883,-22.155,-55.494)
N6: (42.449,-24.358,-53.066)
N7: (41.272,-25.459,-55.650)
N9: (39.911,-24.168,-56.818)
O5': (39.318,-27.169,-59.550)
O3': (40.239,-23.934,-61.266)
OP2: (40.801,-29.229,-59.553)
C3': (39.925,-24.272,-59.946)
C1': (39.027,-23.668,-57.874)
C5': (38.414,-26.318,-60.228)
O4': (38.283,-24.756,-58.396)
C8: (40.538,-25.382,-56.722)
O2': (39.066,-22.032,-59.608)
C6: (41.623,-23.670,-53.870)
C5: (41.112,-24.219,-55.044)
C4: (40.279,-23.408,-55.759)
P: (39.483,-28.690,-60.009)
C4': (38.554,-24.886,-59.804)
C2': (39.829,-23.073,-59.020)
C2: (40.430,-21.729,-54.370)
N1: (41.257,-22.398,-53.563)
N3: (39.883,-22.155,-55.494)
N6: (42.449,-24.358,-53.066)
N7: (41.272,-25.459,-55.650)
N9: (39.911,-24.168,-56.818)
O5': (39.318,-27.169,-59.550)
O3': (40.239,-23.934,-61.266)
C4: (38.675,-25.266,-52.783)
N3: (37.871,-24.192,-53.120)
OP1: (41.788,-23.099,-45.546)
OP2: (41.382,-25.199,-46.955)
C2: (37.889,-22.921,-52.579)
C1': (38.913,-21.330,-50.949)
C3': (38.401,-21.390,-48.642)
O5': (40.758,-22.916,-47.836)
O4': (40.123,-21.227,-50.215)
C5': (40.870,-21.498,-47.912)
P: (41.717,-23.754,-46.881)
C4': (39.827,-20.897,-48.827)
C2': (37.765,-21.028,-49.985)
O2': (37.507,-19.638,-50.053)
N1: (38.817,-22.699,-51.566)
O4: (38.550,-26.355,-53.346)
O2: (37.123,-22.056,-52.967)
C6: (39.656,-23.737,-51.207)
C5: (39.618,-24.968,-51.752)
O3': (37.749,-20.824,-47.506)
N3: (37.871,-24.192,-53.120)
OP1: (41.788,-23.099,-45.546)
OP2: (41.382,-25.199,-46.955)
C2: (37.889,-22.921,-52.579)
C1': (38.913,-21.330,-50.949)
C3': (38.401,-21.390,-48.642)
O5': (40.758,-22.916,-47.836)
O4': (40.123,-21.227,-50.215)
C5': (40.870,-21.498,-47.912)
P: (41.717,-23.754,-46.881)
C4': (39.827,-20.897,-48.827)
C2': (37.765,-21.028,-49.985)
O2': (37.507,-19.638,-50.053)
N1: (38.817,-22.699,-51.566)
O4: (38.550,-26.355,-53.346)
O2: (37.123,-22.056,-52.967)
C6: (39.656,-23.737,-51.207)
C5: (39.618,-24.968,-51.752)
O3': (37.749,-20.824,-47.506)
Image (generated by PyMOL):