Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0552:0551
Extra
PDB:
ATOM 1 O3' C A 551 -11.052 94.886 94.201 1.00 57.58 O
ATOM 2 P G A 552 -10.786 93.766 95.313 1.00 60.69 P
ATOM 3 OP1 G A 552 -10.560 92.473 94.619 1.00 60.07 O
ATOM 4 OP2 G A 552 -11.858 93.880 96.335 1.00 61.91 O
ATOM 5 O5' G A 552 -9.423 94.219 96.000 1.00 62.08 O
ATOM 6 C5' G A 552 -8.230 94.425 95.224 1.00 59.49 C
ATOM 7 C4' G A 552 -7.192 95.153 96.044 1.00 57.95 C
ATOM 8 O4' G A 552 -7.682 96.464 96.430 1.00 58.42 O
ATOM 9 C3' G A 552 -6.807 94.507 97.362 1.00 57.02 C
ATOM 10 O3' G A 552 -5.880 93.460 97.110 1.00 57.04 O
ATOM 11 C2' G A 552 -6.198 95.683 98.117 1.00 57.93 C
ATOM 12 O2' G A 552 -4.882 95.983 97.706 1.00 60.15 O
ATOM 13 C1' G A 552 -7.112 96.832 97.679 1.00 58.24 C
ATOM 14 N9 G A 552 -8.189 97.091 98.630 1.00 59.33 N
ATOM 15 C8 G A 552 -9.353 96.374 98.777 1.00 59.58 C
ATOM 16 N7 G A 552 -10.116 96.825 99.735 1.00 60.81 N
ATOM 17 C5 G A 552 -9.419 97.910 100.250 1.00 61.34 C
ATOM 18 C6 G A 552 -9.749 98.795 101.311 1.00 62.34 C
ATOM 19 O6 G A 552 -10.758 98.797 102.031 1.00 64.64 O
ATOM 20 N1 G A 552 -8.761 99.754 101.503 1.00 63.00 N
ATOM 21 C2 G A 552 -7.605 99.855 100.771 1.00 62.42 C
ATOM 22 N2 G A 552 -6.783 100.859 101.110 1.00 62.15 N
ATOM 23 N3 G A 552 -7.282 99.035 99.781 1.00 61.30 N
ATOM 24 C4 G A 552 -8.229 98.093 99.575 1.00 60.59 C
ATOM 25 P A A 553 -5.373 92.511 98.306 1.00 59.29 P
ATOM 26 OP1 A A 553 -5.956 91.163 98.073 1.00 56.41 O
ATOM 27 OP2 A A 553 -5.561 93.186 99.616 1.00 54.57 O
ATOM 28 O5' A A 553 -3.807 92.385 98.026 1.00 58.41 O
TER
ATOM 1 O3' A B 550 -15.933 98.242 95.939 1.00 59.94 O
ATOM 2 P C B 551 -15.037 97.125 96.654 1.00 60.66 P
ATOM 3 OP1 C B 551 -15.675 95.796 96.440 1.00 61.42 O
ATOM 4 OP2 C B 551 -14.757 97.599 98.036 1.00 60.07 O
ATOM 5 O5' C B 551 -13.681 97.142 95.822 1.00 61.14 O
ATOM 6 C5' C B 551 -13.664 96.760 94.431 1.00 59.05 C
ATOM 7 C4' C B 551 -12.281 96.944 93.851 1.00 57.17 C
ATOM 8 O4' C B 551 -11.915 98.345 93.903 1.00 56.59 O
ATOM 9 C3' C B 551 -11.152 96.247 94.588 1.00 56.60 C
ATOM 10 O3' C B 551 -11.052 94.886 94.201 1.00 57.58 O
ATOM 11 C2' C B 551 -9.939 97.048 94.141 1.00 57.41 C
ATOM 12 O2' C B 551 -9.489 96.680 92.848 1.00 57.04 O
ATOM 13 C1' C B 551 -10.518 98.464 94.096 1.00 56.05 C
ATOM 14 N1 C B 551 -10.280 99.260 95.315 1.00 57.17 N
ATOM 15 C2 C B 551 -9.186 100.126 95.343 1.00 57.48 C
ATOM 16 O2 C B 551 -8.434 100.176 94.356 1.00 58.57 O
ATOM 17 N3 C B 551 -8.969 100.883 96.445 1.00 57.55 N
ATOM 18 C4 C B 551 -9.788 100.786 97.495 1.00 57.83 C
ATOM 19 N4 C B 551 -9.533 101.551 98.559 1.00 56.16 N
ATOM 20 C5 C B 551 -10.903 99.901 97.500 1.00 56.99 C
ATOM 21 C6 C B 551 -11.111 99.165 96.400 1.00 57.70 C
ATOM 22 P G B 552 -10.786 93.766 95.313 1.00 60.69 P
ATOM 23 OP1 G B 552 -10.560 92.473 94.619 1.00 60.07 O
ATOM 24 OP2 G B 552 -11.858 93.880 96.335 1.00 61.91 O
ATOM 25 O5' G B 552 -9.423 94.219 96.000 1.00 62.08 O
TER
ATOM 2 P G A 552 -10.786 93.766 95.313 1.00 60.69 P
ATOM 3 OP1 G A 552 -10.560 92.473 94.619 1.00 60.07 O
ATOM 4 OP2 G A 552 -11.858 93.880 96.335 1.00 61.91 O
ATOM 5 O5' G A 552 -9.423 94.219 96.000 1.00 62.08 O
ATOM 6 C5' G A 552 -8.230 94.425 95.224 1.00 59.49 C
ATOM 7 C4' G A 552 -7.192 95.153 96.044 1.00 57.95 C
ATOM 8 O4' G A 552 -7.682 96.464 96.430 1.00 58.42 O
ATOM 9 C3' G A 552 -6.807 94.507 97.362 1.00 57.02 C
ATOM 10 O3' G A 552 -5.880 93.460 97.110 1.00 57.04 O
ATOM 11 C2' G A 552 -6.198 95.683 98.117 1.00 57.93 C
ATOM 12 O2' G A 552 -4.882 95.983 97.706 1.00 60.15 O
ATOM 13 C1' G A 552 -7.112 96.832 97.679 1.00 58.24 C
ATOM 14 N9 G A 552 -8.189 97.091 98.630 1.00 59.33 N
ATOM 15 C8 G A 552 -9.353 96.374 98.777 1.00 59.58 C
ATOM 16 N7 G A 552 -10.116 96.825 99.735 1.00 60.81 N
ATOM 17 C5 G A 552 -9.419 97.910 100.250 1.00 61.34 C
ATOM 18 C6 G A 552 -9.749 98.795 101.311 1.00 62.34 C
ATOM 19 O6 G A 552 -10.758 98.797 102.031 1.00 64.64 O
ATOM 20 N1 G A 552 -8.761 99.754 101.503 1.00 63.00 N
ATOM 21 C2 G A 552 -7.605 99.855 100.771 1.00 62.42 C
ATOM 22 N2 G A 552 -6.783 100.859 101.110 1.00 62.15 N
ATOM 23 N3 G A 552 -7.282 99.035 99.781 1.00 61.30 N
ATOM 24 C4 G A 552 -8.229 98.093 99.575 1.00 60.59 C
ATOM 25 P A A 553 -5.373 92.511 98.306 1.00 59.29 P
ATOM 26 OP1 A A 553 -5.956 91.163 98.073 1.00 56.41 O
ATOM 27 OP2 A A 553 -5.561 93.186 99.616 1.00 54.57 O
ATOM 28 O5' A A 553 -3.807 92.385 98.026 1.00 58.41 O
TER
ATOM 1 O3' A B 550 -15.933 98.242 95.939 1.00 59.94 O
ATOM 2 P C B 551 -15.037 97.125 96.654 1.00 60.66 P
ATOM 3 OP1 C B 551 -15.675 95.796 96.440 1.00 61.42 O
ATOM 4 OP2 C B 551 -14.757 97.599 98.036 1.00 60.07 O
ATOM 5 O5' C B 551 -13.681 97.142 95.822 1.00 61.14 O
ATOM 6 C5' C B 551 -13.664 96.760 94.431 1.00 59.05 C
ATOM 7 C4' C B 551 -12.281 96.944 93.851 1.00 57.17 C
ATOM 8 O4' C B 551 -11.915 98.345 93.903 1.00 56.59 O
ATOM 9 C3' C B 551 -11.152 96.247 94.588 1.00 56.60 C
ATOM 10 O3' C B 551 -11.052 94.886 94.201 1.00 57.58 O
ATOM 11 C2' C B 551 -9.939 97.048 94.141 1.00 57.41 C
ATOM 12 O2' C B 551 -9.489 96.680 92.848 1.00 57.04 O
ATOM 13 C1' C B 551 -10.518 98.464 94.096 1.00 56.05 C
ATOM 14 N1 C B 551 -10.280 99.260 95.315 1.00 57.17 N
ATOM 15 C2 C B 551 -9.186 100.126 95.343 1.00 57.48 C
ATOM 16 O2 C B 551 -8.434 100.176 94.356 1.00 58.57 O
ATOM 17 N3 C B 551 -8.969 100.883 96.445 1.00 57.55 N
ATOM 18 C4 C B 551 -9.788 100.786 97.495 1.00 57.83 C
ATOM 19 N4 C B 551 -9.533 101.551 98.559 1.00 56.16 N
ATOM 20 C5 C B 551 -10.903 99.901 97.500 1.00 56.99 C
ATOM 21 C6 C B 551 -11.111 99.165 96.400 1.00 57.70 C
ATOM 22 P G B 552 -10.786 93.766 95.313 1.00 60.69 P
ATOM 23 OP1 G B 552 -10.560 92.473 94.619 1.00 60.07 O
ATOM 24 OP2 G B 552 -11.858 93.880 96.335 1.00 61.91 O
ATOM 25 O5' G B 552 -9.423 94.219 96.000 1.00 62.08 O
TER
Atoms:
OP1: (-10.560,92.473,94.619)
OP2: (-11.858,93.880,96.335)
C3': (-6.807,94.507,97.362)
C1': (-7.112,96.832,97.679)
C5': (-8.230,94.425,95.224)
O6: (-10.758,98.797,102.031)
O4': (-7.682,96.464,96.430)
C8: (-9.353,96.374,98.777)
C2: (-7.605,99.855,100.771)
C6: (-9.749,98.795,101.311)
C5: (-9.419,97.910,100.250)
C4: (-8.229,98.093,99.575)
P: (-10.786,93.766,95.313)
C4': (-7.192,95.153,96.044)
C2': (-6.198,95.683,98.117)
O2': (-4.882,95.983,97.706)
N1: (-8.761,99.754,101.503)
N2: (-6.783,100.859,101.110)
N3: (-7.282,99.035,99.781)
N7: (-10.116,96.825,99.735)
N9: (-8.189,97.091,98.630)
O5': (-9.423,94.219,96.000)
O3': (-5.880,93.460,97.110)
OP2: (-11.858,93.880,96.335)
C3': (-6.807,94.507,97.362)
C1': (-7.112,96.832,97.679)
C5': (-8.230,94.425,95.224)
O6: (-10.758,98.797,102.031)
O4': (-7.682,96.464,96.430)
C8: (-9.353,96.374,98.777)
C2: (-7.605,99.855,100.771)
C6: (-9.749,98.795,101.311)
C5: (-9.419,97.910,100.250)
C4: (-8.229,98.093,99.575)
P: (-10.786,93.766,95.313)
C4': (-7.192,95.153,96.044)
C2': (-6.198,95.683,98.117)
O2': (-4.882,95.983,97.706)
N1: (-8.761,99.754,101.503)
N2: (-6.783,100.859,101.110)
N3: (-7.282,99.035,99.781)
N7: (-10.116,96.825,99.735)
N9: (-8.189,97.091,98.630)
O5': (-9.423,94.219,96.000)
O3': (-5.880,93.460,97.110)
C2: (-9.186,100.126,95.343)
OP1: (-15.675,95.796,96.440)
OP2: (-14.757,97.599,98.036)
C4: (-9.788,100.786,97.495)
O5': (-13.681,97.142,95.822)
C3': (-11.152,96.247,94.588)
C1': (-10.518,98.464,94.096)
O4': (-11.915,98.345,93.903)
C5': (-13.664,96.760,94.431)
P: (-15.037,97.125,96.654)
O2: (-8.434,100.176,94.356)
C4': (-12.281,96.944,93.851)
C2': (-9.939,97.048,94.141)
O2': (-9.489,96.680,92.848)
N1: (-10.280,99.260,95.315)
N3: (-8.969,100.883,96.445)
N4: (-9.533,101.551,98.559)
C6: (-11.111,99.165,96.400)
C5: (-10.903,99.901,97.500)
O3': (-11.052,94.886,94.201)
OP1: (-15.675,95.796,96.440)
OP2: (-14.757,97.599,98.036)
C4: (-9.788,100.786,97.495)
O5': (-13.681,97.142,95.822)
C3': (-11.152,96.247,94.588)
C1': (-10.518,98.464,94.096)
O4': (-11.915,98.345,93.903)
C5': (-13.664,96.760,94.431)
P: (-15.037,97.125,96.654)
O2: (-8.434,100.176,94.356)
C4': (-12.281,96.944,93.851)
C2': (-9.939,97.048,94.141)
O2': (-9.489,96.680,92.848)
N1: (-10.280,99.260,95.315)
N3: (-8.969,100.883,96.445)
N4: (-9.533,101.551,98.559)
C6: (-11.111,99.165,96.400)
C5: (-10.903,99.901,97.500)
O3': (-11.052,94.886,94.201)
Image (generated by PyMOL):