Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OIJ:D10:D9
Extra
PDB:
ATOM 1 O3' C A 9 42.013 -14.826 3.039 1.00 58.90 O
ATOM 2 P G A 10 41.727 -15.877 1.855 1.00 79.62 P
ATOM 3 OP1 G A 10 41.222 -17.101 2.554 1.00 71.90 O
ATOM 4 OP2 G A 10 42.995 -15.886 1.071 1.00 62.94 O
ATOM 5 O5' G A 10 40.556 -15.239 0.976 1.00 59.50 O
ATOM 6 C5' G A 10 39.259 -15.061 1.524 1.00 62.80 C
ATOM 7 C4' G A 10 38.369 -14.276 0.594 1.00 63.42 C
ATOM 8 O4' G A 10 38.733 -12.878 0.616 1.00 72.41 O
ATOM 9 C3' G A 10 38.446 -14.665 -0.869 1.00 58.94 C
ATOM 10 O3' G A 10 37.618 -15.776 -1.141 1.00 64.16 O
ATOM 11 C2' G A 10 38.026 -13.395 -1.597 1.00 66.34 C
ATOM 12 O2' G A 10 36.611 -13.252 -1.657 1.00 64.67 O
ATOM 13 C1' G A 10 38.583 -12.321 -0.667 1.00 71.45 C
ATOM 14 N9 G A 10 39.904 -11.840 -1.087 1.00 69.58 N
ATOM 15 C8 G A 10 41.122 -12.322 -0.696 1.00 66.70 C
ATOM 16 N7 G A 10 42.109 -11.664 -1.230 1.00 70.67 N
ATOM 17 C5 G A 10 41.497 -10.686 -2.011 1.00 75.26 C
ATOM 18 C6 G A 10 42.046 -9.657 -2.831 1.00 74.12 C
ATOM 19 O6 G A 10 43.241 -9.395 -3.047 1.00 76.84 O
ATOM 20 N1 G A 10 41.049 -8.886 -3.434 1.00 62.44 N
ATOM 21 C2 G A 10 39.700 -9.078 -3.274 1.00 61.42 C
ATOM 22 N2 G A 10 38.897 -8.237 -3.938 1.00 62.68 N
ATOM 23 N3 G A 10 39.176 -10.022 -2.513 1.00 64.73 N
ATOM 24 C4 G A 10 40.127 -10.780 -1.921 1.00 71.59 C
ATOM 25 P C A 11 37.763 -16.679 -2.459 1.00 82.55 P
ATOM 26 OP1 C A 11 36.859 -17.822 -2.142 1.00 81.09 O
ATOM 27 OP2 C A 11 39.206 -16.907 -2.751 1.00 63.55 O
ATOM 28 O5' C A 11 37.111 -15.749 -3.576 1.00 74.70 O
TER
ATOM 1 O3' A B 8 47.509 -12.168 2.741 1.00 52.13 O
ATOM 2 P C B 9 46.710 -13.095 1.697 1.00 73.32 P
ATOM 3 OP1 C B 9 47.212 -14.480 1.790 1.00 54.09 O
ATOM 4 OP2 C B 9 46.863 -12.358 0.421 1.00 59.38 O
ATOM 5 O5' C B 9 45.201 -13.060 2.233 1.00 61.95 O
ATOM 6 C5' C B 9 44.841 -13.326 3.586 1.00 50.87 C
ATOM 7 C4' C B 9 43.394 -12.995 3.844 1.00 59.74 C
ATOM 8 O4' C B 9 43.200 -11.555 3.890 1.00 60.37 O
ATOM 9 C3' C B 9 42.422 -13.495 2.784 1.00 59.28 C
ATOM 10 O3' C B 9 42.013 -14.826 3.039 1.00 58.90 O
ATOM 11 C2' C B 9 41.266 -12.504 2.848 1.00 58.34 C
ATOM 12 O2' C B 9 40.356 -12.878 3.873 1.00 55.94 O
ATOM 13 C1' C B 9 41.970 -11.217 3.276 1.00 57.04 C
ATOM 14 N1 C B 9 42.278 -10.208 2.242 1.00 58.22 N
ATOM 15 C2 C B 9 41.339 -9.208 1.960 1.00 56.92 C
ATOM 16 O2 C B 9 40.249 -9.218 2.535 1.00 62.61 O
ATOM 17 N3 C B 9 41.624 -8.252 1.056 1.00 52.49 N
ATOM 18 C4 C B 9 42.808 -8.265 0.456 1.00 58.33 C
ATOM 19 N4 C B 9 43.033 -7.301 -0.427 1.00 46.87 N
ATOM 20 C5 C B 9 43.798 -9.265 0.719 1.00 62.80 C
ATOM 21 C6 C B 9 43.499 -10.207 1.621 1.00 61.57 C
ATOM 22 P G B 10 41.727 -15.877 1.855 1.00 79.62 P
ATOM 23 OP1 G B 10 41.222 -17.101 2.554 1.00 71.90 O
ATOM 24 OP2 G B 10 42.995 -15.886 1.071 1.00 62.94 O
ATOM 25 O5' G B 10 40.556 -15.239 0.976 1.00 59.50 O
TER
ATOM 2 P G A 10 41.727 -15.877 1.855 1.00 79.62 P
ATOM 3 OP1 G A 10 41.222 -17.101 2.554 1.00 71.90 O
ATOM 4 OP2 G A 10 42.995 -15.886 1.071 1.00 62.94 O
ATOM 5 O5' G A 10 40.556 -15.239 0.976 1.00 59.50 O
ATOM 6 C5' G A 10 39.259 -15.061 1.524 1.00 62.80 C
ATOM 7 C4' G A 10 38.369 -14.276 0.594 1.00 63.42 C
ATOM 8 O4' G A 10 38.733 -12.878 0.616 1.00 72.41 O
ATOM 9 C3' G A 10 38.446 -14.665 -0.869 1.00 58.94 C
ATOM 10 O3' G A 10 37.618 -15.776 -1.141 1.00 64.16 O
ATOM 11 C2' G A 10 38.026 -13.395 -1.597 1.00 66.34 C
ATOM 12 O2' G A 10 36.611 -13.252 -1.657 1.00 64.67 O
ATOM 13 C1' G A 10 38.583 -12.321 -0.667 1.00 71.45 C
ATOM 14 N9 G A 10 39.904 -11.840 -1.087 1.00 69.58 N
ATOM 15 C8 G A 10 41.122 -12.322 -0.696 1.00 66.70 C
ATOM 16 N7 G A 10 42.109 -11.664 -1.230 1.00 70.67 N
ATOM 17 C5 G A 10 41.497 -10.686 -2.011 1.00 75.26 C
ATOM 18 C6 G A 10 42.046 -9.657 -2.831 1.00 74.12 C
ATOM 19 O6 G A 10 43.241 -9.395 -3.047 1.00 76.84 O
ATOM 20 N1 G A 10 41.049 -8.886 -3.434 1.00 62.44 N
ATOM 21 C2 G A 10 39.700 -9.078 -3.274 1.00 61.42 C
ATOM 22 N2 G A 10 38.897 -8.237 -3.938 1.00 62.68 N
ATOM 23 N3 G A 10 39.176 -10.022 -2.513 1.00 64.73 N
ATOM 24 C4 G A 10 40.127 -10.780 -1.921 1.00 71.59 C
ATOM 25 P C A 11 37.763 -16.679 -2.459 1.00 82.55 P
ATOM 26 OP1 C A 11 36.859 -17.822 -2.142 1.00 81.09 O
ATOM 27 OP2 C A 11 39.206 -16.907 -2.751 1.00 63.55 O
ATOM 28 O5' C A 11 37.111 -15.749 -3.576 1.00 74.70 O
TER
ATOM 1 O3' A B 8 47.509 -12.168 2.741 1.00 52.13 O
ATOM 2 P C B 9 46.710 -13.095 1.697 1.00 73.32 P
ATOM 3 OP1 C B 9 47.212 -14.480 1.790 1.00 54.09 O
ATOM 4 OP2 C B 9 46.863 -12.358 0.421 1.00 59.38 O
ATOM 5 O5' C B 9 45.201 -13.060 2.233 1.00 61.95 O
ATOM 6 C5' C B 9 44.841 -13.326 3.586 1.00 50.87 C
ATOM 7 C4' C B 9 43.394 -12.995 3.844 1.00 59.74 C
ATOM 8 O4' C B 9 43.200 -11.555 3.890 1.00 60.37 O
ATOM 9 C3' C B 9 42.422 -13.495 2.784 1.00 59.28 C
ATOM 10 O3' C B 9 42.013 -14.826 3.039 1.00 58.90 O
ATOM 11 C2' C B 9 41.266 -12.504 2.848 1.00 58.34 C
ATOM 12 O2' C B 9 40.356 -12.878 3.873 1.00 55.94 O
ATOM 13 C1' C B 9 41.970 -11.217 3.276 1.00 57.04 C
ATOM 14 N1 C B 9 42.278 -10.208 2.242 1.00 58.22 N
ATOM 15 C2 C B 9 41.339 -9.208 1.960 1.00 56.92 C
ATOM 16 O2 C B 9 40.249 -9.218 2.535 1.00 62.61 O
ATOM 17 N3 C B 9 41.624 -8.252 1.056 1.00 52.49 N
ATOM 18 C4 C B 9 42.808 -8.265 0.456 1.00 58.33 C
ATOM 19 N4 C B 9 43.033 -7.301 -0.427 1.00 46.87 N
ATOM 20 C5 C B 9 43.798 -9.265 0.719 1.00 62.80 C
ATOM 21 C6 C B 9 43.499 -10.207 1.621 1.00 61.57 C
ATOM 22 P G B 10 41.727 -15.877 1.855 1.00 79.62 P
ATOM 23 OP1 G B 10 41.222 -17.101 2.554 1.00 71.90 O
ATOM 24 OP2 G B 10 42.995 -15.886 1.071 1.00 62.94 O
ATOM 25 O5' G B 10 40.556 -15.239 0.976 1.00 59.50 O
TER
Atoms:
OP1: (41.222,-17.101,2.554)
OP2: (42.995,-15.886,1.071)
C3': (38.446,-14.665,-0.869)
C1': (38.583,-12.321,-0.667)
C5': (39.259,-15.061,1.524)
O6: (43.241,-9.395,-3.047)
O4': (38.733,-12.878,0.616)
C8: (41.122,-12.322,-0.696)
C2: (39.700,-9.078,-3.274)
C6: (42.046,-9.657,-2.831)
C5: (41.497,-10.686,-2.011)
C4: (40.127,-10.780,-1.921)
P: (41.727,-15.877,1.855)
C4': (38.369,-14.276,0.594)
C2': (38.026,-13.395,-1.597)
O2': (36.611,-13.252,-1.657)
N1: (41.049,-8.886,-3.434)
N2: (38.897,-8.237,-3.938)
N3: (39.176,-10.022,-2.513)
N7: (42.109,-11.664,-1.230)
N9: (39.904,-11.840,-1.087)
O5': (40.556,-15.239,0.976)
O3': (37.618,-15.776,-1.141)
OP2: (42.995,-15.886,1.071)
C3': (38.446,-14.665,-0.869)
C1': (38.583,-12.321,-0.667)
C5': (39.259,-15.061,1.524)
O6: (43.241,-9.395,-3.047)
O4': (38.733,-12.878,0.616)
C8: (41.122,-12.322,-0.696)
C2: (39.700,-9.078,-3.274)
C6: (42.046,-9.657,-2.831)
C5: (41.497,-10.686,-2.011)
C4: (40.127,-10.780,-1.921)
P: (41.727,-15.877,1.855)
C4': (38.369,-14.276,0.594)
C2': (38.026,-13.395,-1.597)
O2': (36.611,-13.252,-1.657)
N1: (41.049,-8.886,-3.434)
N2: (38.897,-8.237,-3.938)
N3: (39.176,-10.022,-2.513)
N7: (42.109,-11.664,-1.230)
N9: (39.904,-11.840,-1.087)
O5': (40.556,-15.239,0.976)
O3': (37.618,-15.776,-1.141)
C2: (41.339,-9.208,1.960)
OP1: (47.212,-14.480,1.790)
OP2: (46.863,-12.358,0.421)
C4: (42.808,-8.265,0.456)
O5': (45.201,-13.060,2.233)
C3': (42.422,-13.495,2.784)
C1': (41.970,-11.217,3.276)
O4': (43.200,-11.555,3.890)
C5': (44.841,-13.326,3.586)
P: (46.710,-13.095,1.697)
O2: (40.249,-9.218,2.535)
C4': (43.394,-12.995,3.844)
C2': (41.266,-12.504,2.848)
O2': (40.356,-12.878,3.873)
N1: (42.278,-10.208,2.242)
N3: (41.624,-8.252,1.056)
N4: (43.033,-7.301,-0.427)
C6: (43.499,-10.207,1.621)
C5: (43.798,-9.265,0.719)
O3': (42.013,-14.826,3.039)
OP1: (47.212,-14.480,1.790)
OP2: (46.863,-12.358,0.421)
C4: (42.808,-8.265,0.456)
O5': (45.201,-13.060,2.233)
C3': (42.422,-13.495,2.784)
C1': (41.970,-11.217,3.276)
O4': (43.200,-11.555,3.890)
C5': (44.841,-13.326,3.586)
P: (46.710,-13.095,1.697)
O2: (40.249,-9.218,2.535)
C4': (43.394,-12.995,3.844)
C2': (41.266,-12.504,2.848)
O2': (40.356,-12.878,3.873)
N1: (42.278,-10.208,2.242)
N3: (41.624,-8.252,1.056)
N4: (43.033,-7.301,-0.427)
C6: (43.499,-10.207,1.621)
C5: (43.798,-9.265,0.719)
O3': (42.013,-14.826,3.039)
Image (generated by PyMOL):