Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0345:0347
Extra
PDB:
ATOM 1 O3' C A 344 52.493 119.375 15.219 1.00 94.48 O
ATOM 2 P A A 345 53.446 118.950 13.990 1.00 95.54 P
ATOM 3 OP1 A A 345 52.580 118.637 12.820 1.00 95.20 O
ATOM 4 OP2 A A 345 54.423 117.936 14.476 1.00 95.67 O
ATOM 5 O5' A A 345 54.250 120.281 13.660 1.00 95.79 O
ATOM 6 C5' A A 345 55.396 120.263 12.795 1.00 94.85 C
ATOM 7 C4' A A 345 55.459 121.545 12.007 1.00 94.30 C
ATOM 8 O4' A A 345 54.412 121.534 10.998 1.00 94.35 O
ATOM 9 C3' A A 345 55.253 122.820 12.819 1.00 94.81 C
ATOM 10 O3' A A 345 56.055 123.851 12.262 1.00 96.88 O
ATOM 11 C2' A A 345 53.768 123.113 12.602 1.00 94.16 C
ATOM 12 O2' A A 345 53.418 124.474 12.757 1.00 94.43 O
ATOM 13 C1' A A 345 53.593 122.675 11.151 1.00 93.36 C
ATOM 14 N9 A A 345 52.224 122.327 10.762 1.00 92.19 N
ATOM 15 C8 A A 345 51.484 121.217 11.099 1.00 91.01 C
ATOM 16 N7 A A 345 50.285 121.198 10.566 1.00 90.83 N
ATOM 17 C5 A A 345 50.227 122.376 9.829 1.00 91.18 C
ATOM 18 C6 A A 345 49.217 122.950 9.021 1.00 90.63 C
ATOM 19 N6 A A 345 48.024 122.389 8.803 1.00 90.05 N
ATOM 20 N1 A A 345 49.483 124.138 8.434 1.00 90.41 N
ATOM 21 C2 A A 345 50.680 124.702 8.639 1.00 90.51 C
ATOM 22 N3 A A 345 51.707 124.264 9.367 1.00 91.18 N
ATOM 23 C4 A A 345 51.413 123.083 9.944 1.00 91.86 C
ATOM 24 P G A 346 57.454 124.242 12.955 1.00 98.21 P
ATOM 25 OP1 G A 346 57.903 123.105 13.800 1.00 98.31 O
ATOM 26 OP2 G A 346 57.306 125.593 13.556 1.00 97.78 O
ATOM 27 O5' G A 346 58.460 124.344 11.723 1.00 99.80 O
TER
ATOM 1 O3' G B 346 58.080 122.278 8.137 1.00100.13 O
ATOM 2 P U B 347 59.033 121.133 7.521 1.00 99.88 P
ATOM 3 OP1 U B 347 60.309 121.072 8.287 1.00 99.01 O
ATOM 4 OP2 U B 347 59.070 121.319 6.045 1.00 99.53 O
ATOM 5 O5' U B 347 58.212 119.791 7.777 1.00 99.69 O
ATOM 6 C5' U B 347 58.292 119.089 9.035 1.00 99.57 C
ATOM 7 C4' U B 347 56.957 118.465 9.368 1.00 99.25 C
ATOM 8 O4' U B 347 56.001 119.510 9.676 1.00 98.53 O
ATOM 9 C3' U B 347 56.303 117.676 8.245 1.00 99.85 C
ATOM 10 O3' U B 347 56.820 116.349 8.183 1.00102.51 O
ATOM 11 C2' U B 347 54.827 117.710 8.629 1.00 98.72 C
ATOM 12 O2' U B 347 54.478 116.744 9.599 1.00 98.37 O
ATOM 13 C1' U B 347 54.707 119.104 9.257 1.00 98.09 C
ATOM 14 N1 U B 347 54.117 120.158 8.409 1.00 96.41 N
ATOM 15 C2 U B 347 52.816 119.972 7.961 1.00 95.69 C
ATOM 16 O2 U B 347 52.167 118.963 8.201 1.00 95.42 O
ATOM 17 N3 U B 347 52.303 121.010 7.221 1.00 95.37 N
ATOM 18 C4 U B 347 52.936 122.190 6.885 1.00 94.84 C
ATOM 19 O4 U B 347 52.327 123.038 6.226 1.00 92.86 O
ATOM 20 C5 U B 347 54.284 122.301 7.361 1.00 94.98 C
ATOM 21 C6 U B 347 54.817 121.308 8.084 1.00 95.37 C
ATOM 22 P A B 348 56.901 115.581 6.769 1.00104.49 P
ATOM 23 OP1 A B 348 57.511 114.251 7.060 1.00104.00 O
ATOM 24 OP2 A B 348 57.541 116.476 5.765 1.00103.55 O
ATOM 25 O5' A B 348 55.374 115.375 6.352 1.00102.63 O
TER
ATOM 2 P A A 345 53.446 118.950 13.990 1.00 95.54 P
ATOM 3 OP1 A A 345 52.580 118.637 12.820 1.00 95.20 O
ATOM 4 OP2 A A 345 54.423 117.936 14.476 1.00 95.67 O
ATOM 5 O5' A A 345 54.250 120.281 13.660 1.00 95.79 O
ATOM 6 C5' A A 345 55.396 120.263 12.795 1.00 94.85 C
ATOM 7 C4' A A 345 55.459 121.545 12.007 1.00 94.30 C
ATOM 8 O4' A A 345 54.412 121.534 10.998 1.00 94.35 O
ATOM 9 C3' A A 345 55.253 122.820 12.819 1.00 94.81 C
ATOM 10 O3' A A 345 56.055 123.851 12.262 1.00 96.88 O
ATOM 11 C2' A A 345 53.768 123.113 12.602 1.00 94.16 C
ATOM 12 O2' A A 345 53.418 124.474 12.757 1.00 94.43 O
ATOM 13 C1' A A 345 53.593 122.675 11.151 1.00 93.36 C
ATOM 14 N9 A A 345 52.224 122.327 10.762 1.00 92.19 N
ATOM 15 C8 A A 345 51.484 121.217 11.099 1.00 91.01 C
ATOM 16 N7 A A 345 50.285 121.198 10.566 1.00 90.83 N
ATOM 17 C5 A A 345 50.227 122.376 9.829 1.00 91.18 C
ATOM 18 C6 A A 345 49.217 122.950 9.021 1.00 90.63 C
ATOM 19 N6 A A 345 48.024 122.389 8.803 1.00 90.05 N
ATOM 20 N1 A A 345 49.483 124.138 8.434 1.00 90.41 N
ATOM 21 C2 A A 345 50.680 124.702 8.639 1.00 90.51 C
ATOM 22 N3 A A 345 51.707 124.264 9.367 1.00 91.18 N
ATOM 23 C4 A A 345 51.413 123.083 9.944 1.00 91.86 C
ATOM 24 P G A 346 57.454 124.242 12.955 1.00 98.21 P
ATOM 25 OP1 G A 346 57.903 123.105 13.800 1.00 98.31 O
ATOM 26 OP2 G A 346 57.306 125.593 13.556 1.00 97.78 O
ATOM 27 O5' G A 346 58.460 124.344 11.723 1.00 99.80 O
TER
ATOM 1 O3' G B 346 58.080 122.278 8.137 1.00100.13 O
ATOM 2 P U B 347 59.033 121.133 7.521 1.00 99.88 P
ATOM 3 OP1 U B 347 60.309 121.072 8.287 1.00 99.01 O
ATOM 4 OP2 U B 347 59.070 121.319 6.045 1.00 99.53 O
ATOM 5 O5' U B 347 58.212 119.791 7.777 1.00 99.69 O
ATOM 6 C5' U B 347 58.292 119.089 9.035 1.00 99.57 C
ATOM 7 C4' U B 347 56.957 118.465 9.368 1.00 99.25 C
ATOM 8 O4' U B 347 56.001 119.510 9.676 1.00 98.53 O
ATOM 9 C3' U B 347 56.303 117.676 8.245 1.00 99.85 C
ATOM 10 O3' U B 347 56.820 116.349 8.183 1.00102.51 O
ATOM 11 C2' U B 347 54.827 117.710 8.629 1.00 98.72 C
ATOM 12 O2' U B 347 54.478 116.744 9.599 1.00 98.37 O
ATOM 13 C1' U B 347 54.707 119.104 9.257 1.00 98.09 C
ATOM 14 N1 U B 347 54.117 120.158 8.409 1.00 96.41 N
ATOM 15 C2 U B 347 52.816 119.972 7.961 1.00 95.69 C
ATOM 16 O2 U B 347 52.167 118.963 8.201 1.00 95.42 O
ATOM 17 N3 U B 347 52.303 121.010 7.221 1.00 95.37 N
ATOM 18 C4 U B 347 52.936 122.190 6.885 1.00 94.84 C
ATOM 19 O4 U B 347 52.327 123.038 6.226 1.00 92.86 O
ATOM 20 C5 U B 347 54.284 122.301 7.361 1.00 94.98 C
ATOM 21 C6 U B 347 54.817 121.308 8.084 1.00 95.37 C
ATOM 22 P A B 348 56.901 115.581 6.769 1.00104.49 P
ATOM 23 OP1 A B 348 57.511 114.251 7.060 1.00104.00 O
ATOM 24 OP2 A B 348 57.541 116.476 5.765 1.00103.55 O
ATOM 25 O5' A B 348 55.374 115.375 6.352 1.00102.63 O
TER
Atoms:
OP1: (52.580,118.637,12.820)
OP2: (54.423,117.936,14.476)
C3': (55.253,122.820,12.819)
C1': (53.593,122.675,11.151)
C5': (55.396,120.263,12.795)
O4': (54.412,121.534,10.998)
C8: (51.484,121.217,11.099)
O2': (53.418,124.474,12.757)
C6: (49.217,122.950,9.021)
C5: (50.227,122.376,9.829)
C4: (51.413,123.083,9.944)
P: (53.446,118.950,13.990)
C4': (55.459,121.545,12.007)
C2': (53.768,123.113,12.602)
C2: (50.680,124.702,8.639)
N1: (49.483,124.138,8.434)
N3: (51.707,124.264,9.367)
N6: (48.024,122.389,8.803)
N7: (50.285,121.198,10.566)
N9: (52.224,122.327,10.762)
O5': (54.250,120.281,13.660)
O3': (56.055,123.851,12.262)
OP2: (54.423,117.936,14.476)
C3': (55.253,122.820,12.819)
C1': (53.593,122.675,11.151)
C5': (55.396,120.263,12.795)
O4': (54.412,121.534,10.998)
C8: (51.484,121.217,11.099)
O2': (53.418,124.474,12.757)
C6: (49.217,122.950,9.021)
C5: (50.227,122.376,9.829)
C4: (51.413,123.083,9.944)
P: (53.446,118.950,13.990)
C4': (55.459,121.545,12.007)
C2': (53.768,123.113,12.602)
C2: (50.680,124.702,8.639)
N1: (49.483,124.138,8.434)
N3: (51.707,124.264,9.367)
N6: (48.024,122.389,8.803)
N7: (50.285,121.198,10.566)
N9: (52.224,122.327,10.762)
O5': (54.250,120.281,13.660)
O3': (56.055,123.851,12.262)
C4: (52.936,122.190,6.885)
N3: (52.303,121.010,7.221)
OP1: (60.309,121.072,8.287)
OP2: (59.070,121.319,6.045)
C2: (52.816,119.972,7.961)
C1': (54.707,119.104,9.257)
C3': (56.303,117.676,8.245)
O5': (58.212,119.791,7.777)
O4': (56.001,119.510,9.676)
C5': (58.292,119.089,9.035)
P: (59.033,121.133,7.521)
C4': (56.957,118.465,9.368)
C2': (54.827,117.710,8.629)
O2': (54.478,116.744,9.599)
N1: (54.117,120.158,8.409)
O4: (52.327,123.038,6.226)
O2: (52.167,118.963,8.201)
C6: (54.817,121.308,8.084)
C5: (54.284,122.301,7.361)
O3': (56.820,116.349,8.183)
N3: (52.303,121.010,7.221)
OP1: (60.309,121.072,8.287)
OP2: (59.070,121.319,6.045)
C2: (52.816,119.972,7.961)
C1': (54.707,119.104,9.257)
C3': (56.303,117.676,8.245)
O5': (58.212,119.791,7.777)
O4': (56.001,119.510,9.676)
C5': (58.292,119.089,9.035)
P: (59.033,121.133,7.521)
C4': (56.957,118.465,9.368)
C2': (54.827,117.710,8.629)
O2': (54.478,116.744,9.599)
N1: (54.117,120.158,8.409)
O4: (52.327,123.038,6.226)
O2: (52.167,118.963,8.201)
C6: (54.817,121.308,8.084)
C5: (54.284,122.301,7.361)
O3': (56.820,116.349,8.183)
Image (generated by PyMOL):