ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QVG:0350:0349

Extra

PDB:
ATOM 1 O3' C A 349 52.496 114.045 -0.822 1.00119.35 O
ATOM 2 P G A 350 53.625 113.746 -1.935 1.00120.76 P
ATOM 3 OP1 G A 350 53.099 112.634 -2.769 1.00120.80 O
ATOM 4 OP2 G A 350 54.943 113.588 -1.263 1.00119.48 O
ATOM 5 O5' G A 350 53.657 115.084 -2.823 1.00121.91 O
ATOM 6 C5' G A 350 52.505 115.501 -3.632 1.00122.74 C
ATOM 7 C4' G A 350 52.764 116.843 -4.323 1.00123.27 C
ATOM 8 O4' G A 350 52.820 117.926 -3.345 1.00123.09 O
ATOM 9 C3' G A 350 54.070 116.989 -5.097 1.00123.51 C
ATOM 10 O3' G A 350 54.057 116.384 -6.380 1.00123.72 O
ATOM 11 C2' G A 350 54.251 118.502 -5.154 1.00123.15 C
ATOM 12 O2' G A 350 53.477 119.152 -6.146 1.00122.52 O
ATOM 13 C1' G A 350 53.788 118.895 -3.750 1.00122.34 C
ATOM 14 N9 G A 350 54.921 118.824 -2.829 1.00121.24 N
ATOM 15 C8 G A 350 55.211 117.812 -1.939 1.00120.68 C
ATOM 16 N7 G A 350 56.321 118.007 -1.283 1.00120.42 N
ATOM 17 C5 G A 350 56.788 119.225 -1.758 1.00120.81 C
ATOM 18 C6 G A 350 57.956 119.953 -1.419 1.00121.13 C
ATOM 19 O6 G A 350 58.847 119.652 -0.600 1.00121.13 O
ATOM 20 N1 G A 350 58.041 121.144 -2.145 1.00121.13 N
ATOM 21 C2 G A 350 57.123 121.575 -3.082 1.00120.59 C
ATOM 22 N2 G A 350 57.386 122.746 -3.684 1.00119.77 N
ATOM 23 N3 G A 350 56.032 120.903 -3.403 1.00120.49 N
ATOM 24 C4 G A 350 55.928 119.746 -2.708 1.00120.76 C
ATOM 25 P A A 351 55.383 115.646 -6.919 1.00123.82 P
ATOM 26 OP1 A A 351 54.960 114.850 -8.108 1.00123.91 O
ATOM 27 OP2 A A 351 56.051 114.964 -5.776 1.00123.52 O
ATOM 28 O5' A A 351 56.341 116.834 -7.384 1.00122.54 O
TER

ATOM 1 O3' A B 348 54.311 114.198 5.000 1.00109.39 O
ATOM 2 P C B 349 55.029 113.836 3.614 1.00111.78 P
ATOM 3 OP1 C B 349 54.969 112.355 3.488 1.00111.52 O
ATOM 4 OP2 C B 349 56.347 114.525 3.557 1.00111.93 O
ATOM 5 O5' C B 349 54.067 114.489 2.520 1.00113.02 O
ATOM 6 C5' C B 349 52.703 114.042 2.377 1.00114.90 C
ATOM 7 C4' C B 349 51.963 114.918 1.402 1.00116.48 C
ATOM 8 O4' C B 349 51.824 116.254 1.955 1.00117.26 O
ATOM 9 C3' C B 349 52.657 115.146 0.071 1.00117.72 C
ATOM 10 O3' C B 349 52.496 114.045 -0.822 1.00119.35 O
ATOM 11 C2' C B 349 51.999 116.435 -0.414 1.00117.75 C
ATOM 12 O2' C B 349 50.722 116.240 -1.002 1.00116.79 O
ATOM 13 C1' C B 349 51.863 117.212 0.902 1.00117.44 C
ATOM 14 N1 C B 349 52.974 118.160 1.154 1.00117.18 N
ATOM 15 C2 C B 349 52.870 119.480 0.657 1.00117.05 C
ATOM 16 O2 C B 349 51.842 119.817 0.031 1.00116.21 O
ATOM 17 N3 C B 349 53.894 120.349 0.875 1.00117.30 N
ATOM 18 C4 C B 349 54.978 119.952 1.558 1.00117.35 C
ATOM 19 N4 C B 349 55.959 120.840 1.752 1.00117.51 N
ATOM 20 C5 C B 349 55.104 118.625 2.075 1.00117.03 C
ATOM 21 C6 C B 349 54.091 117.772 1.852 1.00116.94 C
ATOM 22 P G B 350 53.625 113.746 -1.935 1.00120.76 P
ATOM 23 OP1 G B 350 53.099 112.634 -2.769 1.00120.80 O
ATOM 24 OP2 G B 350 54.943 113.588 -1.263 1.00119.48 O
ATOM 25 O5' G B 350 53.657 115.084 -2.823 1.00121.91 O
TER

Atoms:
OP1: (53.099,112.634,-2.769)
OP2: (54.943,113.588,-1.263)
C3': (54.070,116.989,-5.097)
C1': (53.788,118.895,-3.750)
C5': (52.505,115.501,-3.632)
O6: (58.847,119.652,-0.600)
O4': (52.820,117.926,-3.345)
C8: (55.211,117.812,-1.939)
C2: (57.123,121.575,-3.082)
C6: (57.956,119.953,-1.419)
C5: (56.788,119.225,-1.758)
C4: (55.928,119.746,-2.708)
P: (53.625,113.746,-1.935)
C4': (52.764,116.843,-4.323)
C2': (54.251,118.502,-5.154)
O2': (53.477,119.152,-6.146)
N1: (58.041,121.144,-2.145)
N2: (57.386,122.746,-3.684)
N3: (56.032,120.903,-3.403)
N7: (56.321,118.007,-1.283)
N9: (54.921,118.824,-2.829)
O5': (53.657,115.084,-2.823)
O3': (54.057,116.384,-6.380)
C2: (52.870,119.480,0.657)
OP1: (54.969,112.355,3.488)
OP2: (56.347,114.525,3.557)
C4: (54.978,119.952,1.558)
O5': (54.067,114.489,2.520)
C3': (52.657,115.146,0.071)
C1': (51.863,117.212,0.902)
O4': (51.824,116.254,1.955)
C5': (52.703,114.042,2.377)
P: (55.029,113.836,3.614)
O2: (51.842,119.817,0.031)
C4': (51.963,114.918,1.402)
C2': (51.999,116.435,-0.414)
O2': (50.722,116.240,-1.002)
N1: (52.974,118.160,1.154)
N3: (53.894,120.349,0.875)
N4: (55.959,120.840,1.752)
C6: (54.091,117.772,1.852)
C5: (55.104,118.625,2.075)
O3': (52.496,114.045,-0.822)
Image (generated by PyMOL):
PyMOL image
show in jmol