Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLK:C5:C4
Extra
PDB:
ATOM 1 O3' C A 4 12.407 36.594 59.141 1.00 30.17 O
ATOM 2 P G A 5 12.567 36.410 60.717 1.00 32.36 P
ATOM 3 OP1 G A 5 12.163 37.713 61.307 1.00 31.79 O
ATOM 4 OP2 G A 5 13.925 35.870 60.951 1.00 30.02 O
ATOM 5 O5' G A 5 11.489 35.307 61.092 1.00 28.32 O
ATOM 6 C5' G A 5 10.096 35.493 60.895 1.00 28.15 C
ATOM 7 C4' G A 5 9.358 34.196 61.112 1.00 28.39 C
ATOM 8 O4' G A 5 9.731 33.238 60.089 1.00 27.43 O
ATOM 9 C3' G A 5 9.661 33.477 62.417 1.00 30.84 C
ATOM 10 O3' G A 5 8.941 34.005 63.514 1.00 30.12 O
ATOM 11 C2' G A 5 9.302 32.032 62.096 1.00 32.42 C
ATOM 12 O2' G A 5 7.905 31.810 62.202 1.00 32.70 O
ATOM 13 C1' G A 5 9.724 31.932 60.628 1.00 28.78 C
ATOM 14 N9 G A 5 11.074 31.353 60.536 1.00 28.40 N
ATOM 15 C8 G A 5 12.281 32.012 60.497 1.00 24.90 C
ATOM 16 N7 G A 5 13.294 31.188 60.446 1.00 23.13 N
ATOM 17 C5 G A 5 12.723 29.913 60.463 1.00 22.42 C
ATOM 18 C6 G A 5 13.310 28.614 60.433 1.00 25.59 C
ATOM 19 O6 G A 5 14.513 28.312 60.386 1.00 25.31 O
ATOM 20 N1 G A 5 12.341 27.607 60.477 1.00 24.41 N
ATOM 21 C2 G A 5 10.982 27.811 60.535 1.00 25.17 C
ATOM 22 N2 G A 5 10.189 26.724 60.564 1.00 24.78 N
ATOM 23 N3 G A 5 10.432 29.013 60.565 1.00 25.10 N
ATOM 24 C4 G A 5 11.351 30.004 60.523 1.00 25.20 C
ATOM 25 P U A 6 9.723 34.442 64.846 1.00 40.95 P
ATOM 26 OP1 U A 6 10.932 35.182 64.430 1.00 43.39 O
ATOM 27 OP2 U A 6 8.739 35.075 65.760 1.00 48.01 O
ATOM 28 O5' U A 6 10.157 33.033 65.437 1.00 31.83 O
TER
ATOM 1 O3' C B 3 17.846 35.476 56.688 1.00 29.00 O
ATOM 2 P C B 4 17.186 35.513 58.140 1.00 31.87 P
ATOM 3 OP1 C B 4 17.460 36.872 58.664 1.00 35.31 O
ATOM 4 OP2 C B 4 17.656 34.332 58.908 1.00 28.37 O
ATOM 5 O5' C B 4 15.643 35.356 57.828 1.00 24.38 O
ATOM 6 C5' C B 4 14.916 36.390 57.190 1.00 26.33 C
ATOM 7 C4' C B 4 13.471 36.000 57.026 1.00 29.24 C
ATOM 8 O4' C B 4 13.352 34.856 56.144 1.00 28.25 O
ATOM 9 C3' C B 4 12.758 35.531 58.281 1.00 28.40 C
ATOM 10 O3' C B 4 12.407 36.594 59.141 1.00 30.17 O
ATOM 11 C2' C B 4 11.558 34.786 57.710 1.00 29.82 C
ATOM 12 O2' C B 4 10.545 35.687 57.287 1.00 32.30 O
ATOM 13 C1' C B 4 12.181 34.134 56.476 1.00 28.24 C
ATOM 14 N1 C B 4 12.492 32.705 56.667 1.00 27.05 N
ATOM 15 C2 C B 4 11.437 31.798 56.568 1.00 26.71 C
ATOM 16 O2 C B 4 10.300 32.240 56.336 1.00 25.49 O
ATOM 17 N3 C B 4 11.684 30.476 56.729 1.00 27.57 N
ATOM 18 C4 C B 4 12.926 30.047 56.974 1.00 26.55 C
ATOM 19 N4 C B 4 13.122 28.721 57.119 1.00 19.23 N
ATOM 20 C5 C B 4 14.020 30.963 57.080 1.00 24.11 C
ATOM 21 C6 C B 4 13.765 32.273 56.914 1.00 23.35 C
ATOM 22 P G B 5 12.567 36.410 60.717 1.00 32.36 P
ATOM 23 OP1 G B 5 12.163 37.713 61.307 1.00 31.79 O
ATOM 24 OP2 G B 5 13.925 35.870 60.951 1.00 30.02 O
ATOM 25 O5' G B 5 11.489 35.307 61.092 1.00 28.32 O
TER
ATOM 2 P G A 5 12.567 36.410 60.717 1.00 32.36 P
ATOM 3 OP1 G A 5 12.163 37.713 61.307 1.00 31.79 O
ATOM 4 OP2 G A 5 13.925 35.870 60.951 1.00 30.02 O
ATOM 5 O5' G A 5 11.489 35.307 61.092 1.00 28.32 O
ATOM 6 C5' G A 5 10.096 35.493 60.895 1.00 28.15 C
ATOM 7 C4' G A 5 9.358 34.196 61.112 1.00 28.39 C
ATOM 8 O4' G A 5 9.731 33.238 60.089 1.00 27.43 O
ATOM 9 C3' G A 5 9.661 33.477 62.417 1.00 30.84 C
ATOM 10 O3' G A 5 8.941 34.005 63.514 1.00 30.12 O
ATOM 11 C2' G A 5 9.302 32.032 62.096 1.00 32.42 C
ATOM 12 O2' G A 5 7.905 31.810 62.202 1.00 32.70 O
ATOM 13 C1' G A 5 9.724 31.932 60.628 1.00 28.78 C
ATOM 14 N9 G A 5 11.074 31.353 60.536 1.00 28.40 N
ATOM 15 C8 G A 5 12.281 32.012 60.497 1.00 24.90 C
ATOM 16 N7 G A 5 13.294 31.188 60.446 1.00 23.13 N
ATOM 17 C5 G A 5 12.723 29.913 60.463 1.00 22.42 C
ATOM 18 C6 G A 5 13.310 28.614 60.433 1.00 25.59 C
ATOM 19 O6 G A 5 14.513 28.312 60.386 1.00 25.31 O
ATOM 20 N1 G A 5 12.341 27.607 60.477 1.00 24.41 N
ATOM 21 C2 G A 5 10.982 27.811 60.535 1.00 25.17 C
ATOM 22 N2 G A 5 10.189 26.724 60.564 1.00 24.78 N
ATOM 23 N3 G A 5 10.432 29.013 60.565 1.00 25.10 N
ATOM 24 C4 G A 5 11.351 30.004 60.523 1.00 25.20 C
ATOM 25 P U A 6 9.723 34.442 64.846 1.00 40.95 P
ATOM 26 OP1 U A 6 10.932 35.182 64.430 1.00 43.39 O
ATOM 27 OP2 U A 6 8.739 35.075 65.760 1.00 48.01 O
ATOM 28 O5' U A 6 10.157 33.033 65.437 1.00 31.83 O
TER
ATOM 1 O3' C B 3 17.846 35.476 56.688 1.00 29.00 O
ATOM 2 P C B 4 17.186 35.513 58.140 1.00 31.87 P
ATOM 3 OP1 C B 4 17.460 36.872 58.664 1.00 35.31 O
ATOM 4 OP2 C B 4 17.656 34.332 58.908 1.00 28.37 O
ATOM 5 O5' C B 4 15.643 35.356 57.828 1.00 24.38 O
ATOM 6 C5' C B 4 14.916 36.390 57.190 1.00 26.33 C
ATOM 7 C4' C B 4 13.471 36.000 57.026 1.00 29.24 C
ATOM 8 O4' C B 4 13.352 34.856 56.144 1.00 28.25 O
ATOM 9 C3' C B 4 12.758 35.531 58.281 1.00 28.40 C
ATOM 10 O3' C B 4 12.407 36.594 59.141 1.00 30.17 O
ATOM 11 C2' C B 4 11.558 34.786 57.710 1.00 29.82 C
ATOM 12 O2' C B 4 10.545 35.687 57.287 1.00 32.30 O
ATOM 13 C1' C B 4 12.181 34.134 56.476 1.00 28.24 C
ATOM 14 N1 C B 4 12.492 32.705 56.667 1.00 27.05 N
ATOM 15 C2 C B 4 11.437 31.798 56.568 1.00 26.71 C
ATOM 16 O2 C B 4 10.300 32.240 56.336 1.00 25.49 O
ATOM 17 N3 C B 4 11.684 30.476 56.729 1.00 27.57 N
ATOM 18 C4 C B 4 12.926 30.047 56.974 1.00 26.55 C
ATOM 19 N4 C B 4 13.122 28.721 57.119 1.00 19.23 N
ATOM 20 C5 C B 4 14.020 30.963 57.080 1.00 24.11 C
ATOM 21 C6 C B 4 13.765 32.273 56.914 1.00 23.35 C
ATOM 22 P G B 5 12.567 36.410 60.717 1.00 32.36 P
ATOM 23 OP1 G B 5 12.163 37.713 61.307 1.00 31.79 O
ATOM 24 OP2 G B 5 13.925 35.870 60.951 1.00 30.02 O
ATOM 25 O5' G B 5 11.489 35.307 61.092 1.00 28.32 O
TER
Atoms:
OP1: (12.163,37.713,61.307)
OP2: (13.925,35.870,60.951)
C3': (9.661,33.477,62.417)
C1': (9.724,31.932,60.628)
C5': (10.096,35.493,60.895)
O6: (14.513,28.312,60.386)
O4': (9.731,33.238,60.089)
C8: (12.281,32.012,60.497)
C2: (10.982,27.811,60.535)
C6: (13.310,28.614,60.433)
C5: (12.723,29.913,60.463)
C4: (11.351,30.004,60.523)
P: (12.567,36.410,60.717)
C4': (9.358,34.196,61.112)
C2': (9.302,32.032,62.096)
O2': (7.905,31.810,62.202)
N1: (12.341,27.607,60.477)
N2: (10.189,26.724,60.564)
N3: (10.432,29.013,60.565)
N7: (13.294,31.188,60.446)
N9: (11.074,31.353,60.536)
O5': (11.489,35.307,61.092)
O3': (8.941,34.005,63.514)
OP2: (13.925,35.870,60.951)
C3': (9.661,33.477,62.417)
C1': (9.724,31.932,60.628)
C5': (10.096,35.493,60.895)
O6: (14.513,28.312,60.386)
O4': (9.731,33.238,60.089)
C8: (12.281,32.012,60.497)
C2: (10.982,27.811,60.535)
C6: (13.310,28.614,60.433)
C5: (12.723,29.913,60.463)
C4: (11.351,30.004,60.523)
P: (12.567,36.410,60.717)
C4': (9.358,34.196,61.112)
C2': (9.302,32.032,62.096)
O2': (7.905,31.810,62.202)
N1: (12.341,27.607,60.477)
N2: (10.189,26.724,60.564)
N3: (10.432,29.013,60.565)
N7: (13.294,31.188,60.446)
N9: (11.074,31.353,60.536)
O5': (11.489,35.307,61.092)
O3': (8.941,34.005,63.514)
C2: (11.437,31.798,56.568)
OP1: (17.460,36.872,58.664)
OP2: (17.656,34.332,58.908)
C4: (12.926,30.047,56.974)
O5': (15.643,35.356,57.828)
C3': (12.758,35.531,58.281)
C1': (12.181,34.134,56.476)
O4': (13.352,34.856,56.144)
C5': (14.916,36.390,57.190)
P: (17.186,35.513,58.140)
O2: (10.300,32.240,56.336)
C4': (13.471,36.000,57.026)
C2': (11.558,34.786,57.710)
O2': (10.545,35.687,57.287)
N1: (12.492,32.705,56.667)
N3: (11.684,30.476,56.729)
N4: (13.122,28.721,57.119)
C6: (13.765,32.273,56.914)
C5: (14.020,30.963,57.080)
O3': (12.407,36.594,59.141)
OP1: (17.460,36.872,58.664)
OP2: (17.656,34.332,58.908)
C4: (12.926,30.047,56.974)
O5': (15.643,35.356,57.828)
C3': (12.758,35.531,58.281)
C1': (12.181,34.134,56.476)
O4': (13.352,34.856,56.144)
C5': (14.916,36.390,57.190)
P: (17.186,35.513,58.140)
O2: (10.300,32.240,56.336)
C4': (13.471,36.000,57.026)
C2': (11.558,34.786,57.710)
O2': (10.545,35.687,57.287)
N1: (12.492,32.705,56.667)
N3: (11.684,30.476,56.729)
N4: (13.122,28.721,57.119)
C6: (13.765,32.273,56.914)
C5: (14.020,30.963,57.080)
O3': (12.407,36.594,59.141)
Image (generated by PyMOL):