ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2GCS:B70:B68

Extra

PDB:
ATOM 1 O3' U A 69 17.500 6.191 13.165 1.00 44.12 O
ATOM 2 P A A 70 16.953 5.741 11.731 1.00 43.70 P
ATOM 3 OP1 A A 70 16.597 6.976 10.993 1.00 42.61 O
ATOM 4 OP2 A A 70 15.920 4.699 11.953 1.00 44.39 O
ATOM 5 O5' A A 70 18.207 5.069 11.014 1.00 41.49 O
ATOM 6 C5' A A 70 19.328 5.846 10.592 1.00 39.53 C
ATOM 7 C4' A A 70 20.000 5.181 9.410 1.00 36.59 C
ATOM 8 O4' A A 70 20.430 3.850 9.799 1.00 34.55 O
ATOM 9 C3' A A 70 19.094 4.976 8.205 1.00 35.57 C
ATOM 10 O3' A A 70 19.164 6.125 7.360 1.00 35.56 O
ATOM 11 C2' A A 70 19.694 3.739 7.535 1.00 34.58 C
ATOM 12 O2' A A 70 20.795 4.040 6.703 1.00 32.28 O
ATOM 13 C1' A A 70 20.197 2.938 8.739 1.00 34.77 C
ATOM 14 N9 A A 70 19.309 1.878 9.227 1.00 32.79 N
ATOM 15 C8 A A 70 18.126 2.007 9.916 1.00 34.12 C
ATOM 16 N7 A A 70 17.588 0.861 10.265 1.00 31.30 N
ATOM 17 C5 A A 70 18.469 -0.088 9.762 1.00 31.58 C
ATOM 18 C6 A A 70 18.473 -1.501 9.805 1.00 32.19 C
ATOM 19 N6 A A 70 17.525 -2.232 10.397 1.00 26.03 N
ATOM 20 N1 A A 70 19.502 -2.144 9.210 1.00 30.64 N
ATOM 21 C2 A A 70 20.457 -1.412 8.613 1.00 31.18 C
ATOM 22 N3 A A 70 20.563 -0.088 8.506 1.00 29.29 N
ATOM 23 C4 A A 70 19.528 0.524 9.109 1.00 31.26 C
ATOM 24 P G A 71 17.851 6.633 6.579 1.00 39.01 P
ATOM 25 OP1 G A 71 16.911 7.183 7.591 1.00 41.67 O
ATOM 26 OP2 G A 71 17.412 5.521 5.694 1.00 39.19 O
ATOM 27 O5' G A 71 18.372 7.833 5.656 1.00 37.81 O
TER

ATOM 1 O3' G B 67 24.163 1.984 11.634 1.00 30.97 O
ATOM 2 P U B 68 23.806 2.644 13.054 1.00 32.15 P
ATOM 3 OP1 U B 68 23.572 4.101 12.897 1.00 32.63 O
ATOM 4 OP2 U B 68 24.832 2.166 14.010 1.00 32.61 O
ATOM 5 O5' U B 68 22.428 1.931 13.434 1.00 33.25 O
ATOM 6 C5' U B 68 21.194 2.402 12.892 1.00 36.57 C
ATOM 7 C4' U B 68 20.094 1.353 13.000 1.00 37.41 C
ATOM 8 O4' U B 68 20.305 0.289 12.030 1.00 36.68 O
ATOM 9 C3' U B 68 20.081 0.673 14.371 1.00 38.57 C
ATOM 10 O3' U B 68 18.769 0.593 14.939 1.00 41.06 O
ATOM 11 C2' U B 68 20.810 -0.662 14.182 1.00 39.09 C
ATOM 12 O2' U B 68 20.212 -1.720 14.904 1.00 39.86 O
ATOM 13 C1' U B 68 20.563 -0.927 12.697 1.00 36.69 C
ATOM 14 N1 U B 68 21.466 -1.780 11.909 1.00 34.75 N
ATOM 15 C2 U B 68 21.078 -3.109 11.740 1.00 35.21 C
ATOM 16 O2 U B 68 20.059 -3.573 12.230 1.00 28.54 O
ATOM 17 N3 U B 68 21.926 -3.873 10.978 1.00 32.80 N
ATOM 18 C4 U B 68 23.100 -3.465 10.381 1.00 33.39 C
ATOM 19 O4 U B 68 23.759 -4.282 9.730 1.00 29.09 O
ATOM 20 C5 U B 68 23.441 -2.083 10.606 1.00 31.42 C
ATOM 21 C6 U B 68 22.630 -1.308 11.347 1.00 33.68 C
ATOM 22 P U B 69 18.433 1.326 16.332 1.00 43.61 P
ATOM 23 OP1 U B 69 19.632 1.274 17.209 1.00 41.04 O
ATOM 24 OP2 U B 69 17.164 0.711 16.795 1.00 42.68 O
ATOM 25 O5' U B 69 18.137 2.841 15.909 1.00 43.36 O
TER

Atoms:
OP1: (16.597,6.976,10.993)
OP2: (15.920,4.699,11.953)
C3': (19.094,4.976,8.205)
C1': (20.197,2.938,8.739)
C5': (19.328,5.846,10.592)
O4': (20.430,3.850,9.799)
C8: (18.126,2.007,9.916)
O2': (20.795,4.040,6.703)
C6: (18.473,-1.501,9.805)
C5: (18.469,-0.088,9.762)
C4: (19.528,0.524,9.109)
P: (16.953,5.741,11.731)
C4': (20.000,5.181,9.410)
C2': (19.694,3.739,7.535)
C2: (20.457,-1.412,8.613)
N1: (19.502,-2.144,9.210)
N3: (20.563,-0.088,8.506)
N6: (17.525,-2.232,10.397)
N7: (17.588,0.861,10.265)
N9: (19.309,1.878,9.227)
O5': (18.207,5.069,11.014)
O3': (19.164,6.125,7.360)
C4: (23.100,-3.465,10.381)
N3: (21.926,-3.873,10.978)
OP1: (23.572,4.101,12.897)
OP2: (24.832,2.166,14.010)
C2: (21.078,-3.109,11.740)
C1': (20.563,-0.927,12.697)
C3': (20.081,0.673,14.371)
O5': (22.428,1.931,13.434)
O4': (20.305,0.289,12.030)
C5': (21.194,2.402,12.892)
P: (23.806,2.644,13.054)
C4': (20.094,1.353,13.000)
C2': (20.810,-0.662,14.182)
O2': (20.212,-1.720,14.904)
N1: (21.466,-1.780,11.909)
O4: (23.759,-4.282,9.730)
O2: (20.059,-3.573,12.230)
C6: (22.630,-1.308,11.347)
C5: (23.441,-2.083,10.606)
O3': (18.769,0.593,14.939)
Image (generated by PyMOL):
PyMOL image
show in jmol