ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QEX:0552:0551

Extra

PDB:
ATOM 1 O3' C A 551 -11.195 97.190 94.939 1.00 49.08 O
ATOM 2 P G A 552 -10.808 96.091 96.042 1.00 49.06 P
ATOM 3 OP1 G A 552 -10.549 94.813 95.337 1.00 47.76 O
ATOM 4 OP2 G A 552 -11.799 96.135 97.138 1.00 49.32 O
ATOM 5 O5' G A 552 -9.424 96.607 96.626 1.00 51.70 O
ATOM 6 C5' G A 552 -8.255 96.684 95.803 1.00 51.16 C
ATOM 7 C4' G A 552 -7.141 97.330 96.574 1.00 51.32 C
ATOM 8 O4' G A 552 -7.568 98.654 96.983 1.00 53.17 O
ATOM 9 C3' G A 552 -6.767 96.637 97.872 1.00 49.99 C
ATOM 10 O3' G A 552 -5.857 95.576 97.590 1.00 48.12 O
ATOM 11 C2' G A 552 -6.149 97.772 98.681 1.00 52.12 C
ATOM 12 O2' G A 552 -4.803 98.027 98.338 1.00 52.74 O
ATOM 13 C1' G A 552 -7.009 98.967 98.246 1.00 53.91 C
ATOM 14 N9 G A 552 -8.103 99.305 99.152 1.00 56.69 N
ATOM 15 C8 G A 552 -9.282 98.621 99.305 1.00 57.26 C
ATOM 16 N7 G A 552 -10.070 99.149 100.202 1.00 59.42 N
ATOM 17 C5 G A 552 -9.370 100.251 100.670 1.00 60.60 C
ATOM 18 C6 G A 552 -9.718 101.204 101.666 1.00 62.67 C
ATOM 19 O6 G A 552 -10.745 101.257 102.365 1.00 64.41 O
ATOM 20 N1 G A 552 -8.720 102.160 101.824 1.00 62.71 N
ATOM 21 C2 G A 552 -7.538 102.190 101.128 1.00 61.80 C
ATOM 22 N2 G A 552 -6.702 103.186 101.438 1.00 63.12 N
ATOM 23 N3 G A 552 -7.200 101.306 100.202 1.00 60.49 N
ATOM 24 C4 G A 552 -8.156 100.370 100.027 1.00 59.05 C
ATOM 25 P A A 553 -5.236 94.697 98.786 1.00 48.09 P
ATOM 26 OP1 A A 553 -5.773 93.321 98.671 1.00 45.59 O
ATOM 27 OP2 A A 553 -5.377 95.433 100.062 1.00 46.55 O
ATOM 28 O5' A A 553 -3.686 94.608 98.422 1.00 48.84 O
TER

ATOM 1 O3' A B 550 -15.977 100.632 96.590 1.00 53.31 O
ATOM 2 P C B 551 -15.123 99.531 97.375 1.00 52.71 P
ATOM 3 OP1 C B 551 -15.778 98.207 97.229 1.00 52.37 O
ATOM 4 OP2 C B 551 -14.856 100.071 98.727 1.00 50.48 O
ATOM 5 O5' C B 551 -13.765 99.467 96.551 1.00 53.24 O
ATOM 6 C5' C B 551 -13.772 99.111 95.157 1.00 51.16 C
ATOM 7 C4' C B 551 -12.393 99.276 94.570 1.00 50.35 C
ATOM 8 O4' C B 551 -12.009 100.671 94.627 1.00 50.66 O
ATOM 9 C3' C B 551 -11.276 98.560 95.310 1.00 50.23 C
ATOM 10 O3' C B 551 -11.195 97.190 94.939 1.00 49.08 O
ATOM 11 C2' C B 551 -10.043 99.343 94.877 1.00 50.99 C
ATOM 12 O2' C B 551 -9.538 98.946 93.618 1.00 51.31 O
ATOM 13 C1' C B 551 -10.603 100.766 94.788 1.00 52.18 C
ATOM 14 N1 C B 551 -10.309 101.596 95.969 1.00 54.42 N
ATOM 15 C2 C B 551 -9.102 102.295 96.001 1.00 54.19 C
ATOM 16 O2 C B 551 -8.342 102.214 95.027 1.00 54.15 O
ATOM 17 N3 C B 551 -8.797 103.042 97.087 1.00 54.55 N
ATOM 18 C4 C B 551 -9.651 103.111 98.110 1.00 55.00 C
ATOM 19 N4 C B 551 -9.303 103.851 99.164 1.00 56.13 N
ATOM 20 C5 C B 551 -10.898 102.422 98.098 1.00 54.58 C
ATOM 21 C6 C B 551 -11.184 101.682 97.017 1.00 54.50 C
ATOM 22 P G B 552 -10.808 96.091 96.042 1.00 49.06 P
ATOM 23 OP1 G B 552 -10.549 94.813 95.337 1.00 47.76 O
ATOM 24 OP2 G B 552 -11.799 96.135 97.138 1.00 49.32 O
ATOM 25 O5' G B 552 -9.424 96.607 96.626 1.00 51.70 O
TER

Atoms:
OP1: (-10.549,94.813,95.337)
OP2: (-11.799,96.135,97.138)
C3': (-6.767,96.637,97.872)
C1': (-7.009,98.967,98.246)
C5': (-8.255,96.684,95.803)
O6: (-10.745,101.257,102.365)
O4': (-7.568,98.654,96.983)
C8: (-9.282,98.621,99.305)
C2: (-7.538,102.190,101.128)
C6: (-9.718,101.204,101.666)
C5: (-9.370,100.251,100.670)
C4: (-8.156,100.370,100.027)
P: (-10.808,96.091,96.042)
C4': (-7.141,97.330,96.574)
C2': (-6.149,97.772,98.681)
O2': (-4.803,98.027,98.338)
N1: (-8.720,102.160,101.824)
N2: (-6.702,103.186,101.438)
N3: (-7.200,101.306,100.202)
N7: (-10.070,99.149,100.202)
N9: (-8.103,99.305,99.152)
O5': (-9.424,96.607,96.626)
O3': (-5.857,95.576,97.590)
C2: (-9.102,102.295,96.001)
OP1: (-15.778,98.207,97.229)
OP2: (-14.856,100.071,98.727)
C4: (-9.651,103.111,98.110)
O5': (-13.765,99.467,96.551)
C3': (-11.276,98.560,95.310)
C1': (-10.603,100.766,94.788)
O4': (-12.009,100.671,94.627)
C5': (-13.772,99.111,95.157)
P: (-15.123,99.531,97.375)
O2: (-8.342,102.214,95.027)
C4': (-12.393,99.276,94.570)
C2': (-10.043,99.343,94.877)
O2': (-9.538,98.946,93.618)
N1: (-10.309,101.596,95.969)
N3: (-8.797,103.042,97.087)
N4: (-9.303,103.851,99.164)
C6: (-11.184,101.682,97.017)
C5: (-10.898,102.422,98.098)
O3': (-11.195,97.190,94.939)
Image (generated by PyMOL):
PyMOL image
show in jmol