ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02042:02380

Extra

PDB:
ATOM 1 O3' A A2041 49.053 126.601 100.756 1.00 32.45 O
ATOM 2 P A A2042 49.835 126.192 99.418 1.00 33.23 P
ATOM 3 OP1 A A2042 49.948 127.391 98.549 1.00 35.15 O
ATOM 4 OP2 A A2042 49.163 124.983 98.902 1.00 34.21 O
ATOM 5 O5' A A2042 51.289 125.784 99.929 1.00 29.87 O
ATOM 6 C5' A A2042 51.500 124.538 100.595 1.00 27.17 C
ATOM 7 C4' A A2042 52.583 124.673 101.631 1.00 28.04 C
ATOM 8 O4' A A2042 52.680 123.434 102.364 1.00 27.30 O
ATOM 9 C3' A A2042 53.964 124.940 101.065 1.00 29.43 C
ATOM 10 O3' A A2042 54.149 126.348 101.061 1.00 30.02 O
ATOM 11 C2' A A2042 54.896 124.259 102.063 1.00 27.91 C
ATOM 12 O2' A A2042 55.223 125.102 103.146 1.00 30.96 O
ATOM 13 C1' A A2042 54.032 123.097 102.568 1.00 25.31 C
ATOM 14 N9 A A2042 54.243 121.785 101.965 1.00 23.10 N
ATOM 15 C8 A A2042 54.502 120.611 102.626 1.00 22.68 C
ATOM 16 N7 A A2042 54.614 119.572 101.838 1.00 21.71 N
ATOM 17 C5 A A2042 54.430 120.098 100.567 1.00 23.45 C
ATOM 18 C6 A A2042 54.446 119.514 99.286 1.00 24.15 C
ATOM 19 N6 A A2042 54.675 118.216 99.061 1.00 24.84 N
ATOM 20 N1 A A2042 54.220 120.321 98.227 1.00 25.46 N
ATOM 21 C2 A A2042 53.997 121.620 98.447 1.00 23.59 C
ATOM 22 N3 A A2042 53.963 122.285 99.598 1.00 24.39 N
ATOM 23 C4 A A2042 54.193 121.459 100.631 1.00 22.96 C
ATOM 24 P G A2043 55.071 127.039 99.953 1.00 31.57 P
ATOM 25 OP1 G A2043 55.017 126.245 98.708 1.00 31.12 O
ATOM 26 OP2 G A2043 56.376 127.314 100.584 1.00 34.12 O
ATOM 27 O5' G A2043 54.329 128.424 99.698 1.00 30.20 O
TER

ATOM 1 O3' A B2379 59.602 122.528 95.388 1.00 54.15 O
ATOM 2 P U B2380 58.569 121.490 96.076 1.00 55.84 P
ATOM 3 OP1 U B2380 59.230 120.153 96.157 1.00 50.49 O
ATOM 4 OP2 U B2380 57.245 121.633 95.403 1.00 54.70 O
ATOM 5 O5' U B2380 58.400 122.022 97.569 1.00 52.90 O
ATOM 6 C5' U B2380 57.638 123.213 97.848 1.00 47.94 C
ATOM 7 C4' U B2380 57.920 123.702 99.250 1.00 44.56 C
ATOM 8 O4' U B2380 57.302 122.811 100.219 1.00 42.72 O
ATOM 9 C3' U B2380 59.391 123.791 99.634 1.00 43.93 C
ATOM 10 O3' U B2380 59.613 124.944 100.430 1.00 42.84 O
ATOM 11 C2' U B2380 59.612 122.505 100.423 1.00 42.83 C
ATOM 12 O2' U B2380 60.685 122.539 101.340 1.00 43.84 O
ATOM 13 C1' U B2380 58.275 122.356 101.139 1.00 39.99 C
ATOM 14 N1 U B2380 57.967 120.962 101.488 1.00 37.47 N
ATOM 15 C2 U B2380 57.749 120.659 102.822 1.00 37.02 C
ATOM 16 O2 U B2380 57.763 121.494 103.708 1.00 37.48 O
ATOM 17 N3 U B2380 57.499 119.337 103.079 1.00 36.24 N
ATOM 18 C4 U B2380 57.434 118.312 102.163 1.00 36.07 C
ATOM 19 O4 U B2380 57.229 117.163 102.556 1.00 37.02 O
ATOM 20 C5 U B2380 57.648 118.708 100.808 1.00 35.77 C
ATOM 21 C6 U B2380 57.903 119.984 100.524 1.00 36.17 C
ATOM 22 P G B2381 60.452 126.164 99.812 1.00 43.40 P
ATOM 23 OP1 G B2381 60.296 127.365 100.672 1.00 42.57 O
ATOM 24 OP2 G B2381 60.099 126.235 98.373 1.00 45.31 O
ATOM 25 O5' G B2381 61.960 125.672 99.871 1.00 40.00 O
TER

Atoms:
OP1: (49.948,127.391,98.549)
OP2: (49.163,124.983,98.902)
C3': (53.964,124.940,101.065)
C1': (54.032,123.097,102.568)
C5': (51.500,124.538,100.595)
O4': (52.680,123.434,102.364)
C8: (54.502,120.611,102.626)
O2': (55.223,125.102,103.146)
C6: (54.446,119.514,99.286)
C5: (54.430,120.098,100.567)
C4: (54.193,121.459,100.631)
P: (49.835,126.192,99.418)
C4': (52.583,124.673,101.631)
C2': (54.896,124.259,102.063)
C2: (53.997,121.620,98.447)
N1: (54.220,120.321,98.227)
N3: (53.963,122.285,99.598)
N6: (54.675,118.216,99.061)
N7: (54.614,119.572,101.838)
N9: (54.243,121.785,101.965)
O5': (51.289,125.784,99.929)
O3': (54.149,126.348,101.061)
C4: (57.434,118.312,102.163)
N3: (57.499,119.337,103.079)
OP1: (59.230,120.153,96.157)
OP2: (57.245,121.633,95.403)
C2: (57.749,120.659,102.822)
C1': (58.275,122.356,101.139)
C3': (59.391,123.791,99.634)
O5': (58.400,122.022,97.569)
O4': (57.302,122.811,100.219)
C5': (57.638,123.213,97.848)
P: (58.569,121.490,96.076)
C4': (57.920,123.702,99.250)
C2': (59.612,122.505,100.423)
O2': (60.685,122.539,101.340)
N1: (57.967,120.962,101.488)
O4: (57.229,117.163,102.556)
O2: (57.763,121.494,103.708)
C6: (57.903,119.984,100.524)
C5: (57.648,118.708,100.808)
O3': (59.613,124.944,100.430)
Image (generated by PyMOL):
PyMOL image
show in jmol