Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0235:0253
Extra
PDB:
ATOM 1 O3' G A 234 94.015 118.111 -7.731 1.00 71.84 O
ATOM 2 P A A 235 94.509 119.151 -8.849 1.00 68.99 P
ATOM 3 OP1 A A 235 94.058 118.616 -10.163 1.00 69.70 O
ATOM 4 OP2 A A 235 95.954 119.412 -8.616 1.00 66.68 O
ATOM 5 O5' A A 235 93.688 120.474 -8.530 1.00 66.65 O
ATOM 6 C5' A A 235 92.285 120.573 -8.841 1.00 66.64 C
ATOM 7 C4' A A 235 91.698 121.770 -8.138 1.00 67.63 C
ATOM 8 O4' A A 235 91.624 121.495 -6.710 1.00 66.96 O
ATOM 9 C3' A A 235 92.546 123.032 -8.277 1.00 67.61 C
ATOM 10 O3' A A 235 91.717 124.181 -8.188 1.00 68.66 O
ATOM 11 C2' A A 235 93.424 122.957 -7.036 1.00 67.44 C
ATOM 12 O2' A A 235 93.976 124.198 -6.650 1.00 67.05 O
ATOM 13 C1' A A 235 92.421 122.429 -6.012 1.00 67.52 C
ATOM 14 N9 A A 235 93.023 121.761 -4.861 1.00 68.05 N
ATOM 15 C8 A A 235 93.806 120.633 -4.836 1.00 68.45 C
ATOM 16 N7 A A 235 94.209 120.297 -3.636 1.00 68.10 N
ATOM 17 C5 A A 235 93.649 121.265 -2.813 1.00 67.48 C
ATOM 18 C6 A A 235 93.701 121.470 -1.429 1.00 66.31 C
ATOM 19 N6 A A 235 94.372 120.681 -0.592 1.00 65.47 N
ATOM 20 N1 A A 235 93.034 122.528 -0.926 1.00 66.84 N
ATOM 21 C2 A A 235 92.362 123.321 -1.766 1.00 67.76 C
ATOM 22 N3 A A 235 92.236 123.233 -3.084 1.00 68.10 N
ATOM 23 C4 A A 235 92.913 122.170 -3.553 1.00 67.86 C
ATOM 24 P A A 236 91.199 124.892 -9.523 1.00 68.97 P
ATOM 25 OP1 A A 236 92.257 124.738 -10.556 1.00 71.53 O
ATOM 26 OP2 A A 236 90.715 126.245 -9.151 1.00 68.99 O
ATOM 27 O5' A A 236 89.941 124.026 -9.966 1.00 68.99 O
TER
ATOM 1 O3' G B 252 91.469 119.855 3.474 1.00 57.95 O
ATOM 2 P U B 253 90.140 119.628 4.344 1.00 54.29 P
ATOM 3 OP1 U B 253 90.408 120.139 5.711 1.00 56.87 O
ATOM 4 OP2 U B 253 89.725 118.220 4.159 1.00 56.34 O
ATOM 5 O5' U B 253 89.064 120.575 3.650 1.00 56.13 O
ATOM 6 C5' U B 253 88.912 121.955 4.052 1.00 57.15 C
ATOM 7 C4' U B 253 88.443 122.788 2.885 1.00 56.95 C
ATOM 8 O4' U B 253 89.539 123.004 1.960 1.00 56.75 O
ATOM 9 C3' U B 253 87.366 122.125 2.050 1.00 57.64 C
ATOM 10 O3' U B 253 86.076 122.305 2.608 1.00 57.79 O
ATOM 11 C2' U B 253 87.542 122.789 0.694 1.00 56.65 C
ATOM 12 O2' U B 253 86.934 124.063 0.630 1.00 56.90 O
ATOM 13 C1' U B 253 89.067 122.915 0.627 1.00 56.15 C
ATOM 14 N1 U B 253 89.725 121.759 -0.005 1.00 57.30 N
ATOM 15 C2 U B 253 89.531 121.557 -1.364 1.00 57.76 C
ATOM 16 O2 U B 253 88.859 122.309 -2.063 1.00 58.86 O
ATOM 17 N3 U B 253 90.151 120.442 -1.874 1.00 55.85 N
ATOM 18 C4 U B 253 90.931 119.538 -1.190 1.00 56.63 C
ATOM 19 O4 U B 253 91.410 118.575 -1.790 1.00 57.56 O
ATOM 20 C5 U B 253 91.104 119.829 0.199 1.00 56.44 C
ATOM 21 C6 U B 253 90.511 120.897 0.731 1.00 55.82 C
ATOM 22 P G B 254 85.057 121.070 2.635 1.00 58.67 P
ATOM 23 OP1 G B 254 83.751 121.595 3.114 1.00 58.30 O
ATOM 24 OP2 G B 254 85.708 119.941 3.346 1.00 58.89 O
ATOM 25 O5' G B 254 84.914 120.650 1.106 1.00 60.27 O
TER
ATOM 2 P A A 235 94.509 119.151 -8.849 1.00 68.99 P
ATOM 3 OP1 A A 235 94.058 118.616 -10.163 1.00 69.70 O
ATOM 4 OP2 A A 235 95.954 119.412 -8.616 1.00 66.68 O
ATOM 5 O5' A A 235 93.688 120.474 -8.530 1.00 66.65 O
ATOM 6 C5' A A 235 92.285 120.573 -8.841 1.00 66.64 C
ATOM 7 C4' A A 235 91.698 121.770 -8.138 1.00 67.63 C
ATOM 8 O4' A A 235 91.624 121.495 -6.710 1.00 66.96 O
ATOM 9 C3' A A 235 92.546 123.032 -8.277 1.00 67.61 C
ATOM 10 O3' A A 235 91.717 124.181 -8.188 1.00 68.66 O
ATOM 11 C2' A A 235 93.424 122.957 -7.036 1.00 67.44 C
ATOM 12 O2' A A 235 93.976 124.198 -6.650 1.00 67.05 O
ATOM 13 C1' A A 235 92.421 122.429 -6.012 1.00 67.52 C
ATOM 14 N9 A A 235 93.023 121.761 -4.861 1.00 68.05 N
ATOM 15 C8 A A 235 93.806 120.633 -4.836 1.00 68.45 C
ATOM 16 N7 A A 235 94.209 120.297 -3.636 1.00 68.10 N
ATOM 17 C5 A A 235 93.649 121.265 -2.813 1.00 67.48 C
ATOM 18 C6 A A 235 93.701 121.470 -1.429 1.00 66.31 C
ATOM 19 N6 A A 235 94.372 120.681 -0.592 1.00 65.47 N
ATOM 20 N1 A A 235 93.034 122.528 -0.926 1.00 66.84 N
ATOM 21 C2 A A 235 92.362 123.321 -1.766 1.00 67.76 C
ATOM 22 N3 A A 235 92.236 123.233 -3.084 1.00 68.10 N
ATOM 23 C4 A A 235 92.913 122.170 -3.553 1.00 67.86 C
ATOM 24 P A A 236 91.199 124.892 -9.523 1.00 68.97 P
ATOM 25 OP1 A A 236 92.257 124.738 -10.556 1.00 71.53 O
ATOM 26 OP2 A A 236 90.715 126.245 -9.151 1.00 68.99 O
ATOM 27 O5' A A 236 89.941 124.026 -9.966 1.00 68.99 O
TER
ATOM 1 O3' G B 252 91.469 119.855 3.474 1.00 57.95 O
ATOM 2 P U B 253 90.140 119.628 4.344 1.00 54.29 P
ATOM 3 OP1 U B 253 90.408 120.139 5.711 1.00 56.87 O
ATOM 4 OP2 U B 253 89.725 118.220 4.159 1.00 56.34 O
ATOM 5 O5' U B 253 89.064 120.575 3.650 1.00 56.13 O
ATOM 6 C5' U B 253 88.912 121.955 4.052 1.00 57.15 C
ATOM 7 C4' U B 253 88.443 122.788 2.885 1.00 56.95 C
ATOM 8 O4' U B 253 89.539 123.004 1.960 1.00 56.75 O
ATOM 9 C3' U B 253 87.366 122.125 2.050 1.00 57.64 C
ATOM 10 O3' U B 253 86.076 122.305 2.608 1.00 57.79 O
ATOM 11 C2' U B 253 87.542 122.789 0.694 1.00 56.65 C
ATOM 12 O2' U B 253 86.934 124.063 0.630 1.00 56.90 O
ATOM 13 C1' U B 253 89.067 122.915 0.627 1.00 56.15 C
ATOM 14 N1 U B 253 89.725 121.759 -0.005 1.00 57.30 N
ATOM 15 C2 U B 253 89.531 121.557 -1.364 1.00 57.76 C
ATOM 16 O2 U B 253 88.859 122.309 -2.063 1.00 58.86 O
ATOM 17 N3 U B 253 90.151 120.442 -1.874 1.00 55.85 N
ATOM 18 C4 U B 253 90.931 119.538 -1.190 1.00 56.63 C
ATOM 19 O4 U B 253 91.410 118.575 -1.790 1.00 57.56 O
ATOM 20 C5 U B 253 91.104 119.829 0.199 1.00 56.44 C
ATOM 21 C6 U B 253 90.511 120.897 0.731 1.00 55.82 C
ATOM 22 P G B 254 85.057 121.070 2.635 1.00 58.67 P
ATOM 23 OP1 G B 254 83.751 121.595 3.114 1.00 58.30 O
ATOM 24 OP2 G B 254 85.708 119.941 3.346 1.00 58.89 O
ATOM 25 O5' G B 254 84.914 120.650 1.106 1.00 60.27 O
TER
Atoms:
OP1: (94.058,118.616,-10.163)
OP2: (95.954,119.412,-8.616)
C3': (92.546,123.032,-8.277)
C1': (92.421,122.429,-6.012)
C5': (92.285,120.573,-8.841)
O4': (91.624,121.495,-6.710)
C8: (93.806,120.633,-4.836)
O2': (93.976,124.198,-6.650)
C6: (93.701,121.470,-1.429)
C5: (93.649,121.265,-2.813)
C4: (92.913,122.170,-3.553)
P: (94.509,119.151,-8.849)
C4': (91.698,121.770,-8.138)
C2': (93.424,122.957,-7.036)
C2: (92.362,123.321,-1.766)
N1: (93.034,122.528,-0.926)
N3: (92.236,123.233,-3.084)
N6: (94.372,120.681,-0.592)
N7: (94.209,120.297,-3.636)
N9: (93.023,121.761,-4.861)
O5': (93.688,120.474,-8.530)
O3': (91.717,124.181,-8.188)
OP2: (95.954,119.412,-8.616)
C3': (92.546,123.032,-8.277)
C1': (92.421,122.429,-6.012)
C5': (92.285,120.573,-8.841)
O4': (91.624,121.495,-6.710)
C8: (93.806,120.633,-4.836)
O2': (93.976,124.198,-6.650)
C6: (93.701,121.470,-1.429)
C5: (93.649,121.265,-2.813)
C4: (92.913,122.170,-3.553)
P: (94.509,119.151,-8.849)
C4': (91.698,121.770,-8.138)
C2': (93.424,122.957,-7.036)
C2: (92.362,123.321,-1.766)
N1: (93.034,122.528,-0.926)
N3: (92.236,123.233,-3.084)
N6: (94.372,120.681,-0.592)
N7: (94.209,120.297,-3.636)
N9: (93.023,121.761,-4.861)
O5': (93.688,120.474,-8.530)
O3': (91.717,124.181,-8.188)
C4: (90.931,119.538,-1.190)
N3: (90.151,120.442,-1.874)
OP1: (90.408,120.139,5.711)
OP2: (89.725,118.220,4.159)
C2: (89.531,121.557,-1.364)
C1': (89.067,122.915,0.627)
C3': (87.366,122.125,2.050)
O5': (89.064,120.575,3.650)
O4': (89.539,123.004,1.960)
C5': (88.912,121.955,4.052)
P: (90.140,119.628,4.344)
C4': (88.443,122.788,2.885)
C2': (87.542,122.789,0.694)
O2': (86.934,124.063,0.630)
N1: (89.725,121.759,-0.005)
O4: (91.410,118.575,-1.790)
O2: (88.859,122.309,-2.063)
C6: (90.511,120.897,0.731)
C5: (91.104,119.829,0.199)
O3': (86.076,122.305,2.608)
N3: (90.151,120.442,-1.874)
OP1: (90.408,120.139,5.711)
OP2: (89.725,118.220,4.159)
C2: (89.531,121.557,-1.364)
C1': (89.067,122.915,0.627)
C3': (87.366,122.125,2.050)
O5': (89.064,120.575,3.650)
O4': (89.539,123.004,1.960)
C5': (88.912,121.955,4.052)
P: (90.140,119.628,4.344)
C4': (88.443,122.788,2.885)
C2': (87.542,122.789,0.694)
O2': (86.934,124.063,0.630)
N1: (89.725,121.759,-0.005)
O4: (91.410,118.575,-1.790)
O2: (88.859,122.309,-2.063)
C6: (90.511,120.897,0.731)
C5: (91.104,119.829,0.199)
O3': (86.076,122.305,2.608)
Image (generated by PyMOL):