Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0567:0566
Extra
PDB:
ATOM 1 O3' C A 566 5.771 89.023 138.461 1.00 66.21 O
ATOM 2 P G A 567 4.863 89.547 137.245 1.00 66.72 P
ATOM 3 OP1 G A 567 3.654 90.202 137.817 1.00 66.20 O
ATOM 4 OP2 G A 567 4.705 88.426 136.275 1.00 65.68 O
ATOM 5 O5' G A 567 5.747 90.686 136.569 1.00 65.45 O
ATOM 6 C5' G A 567 6.130 91.868 137.303 1.00 63.07 C
ATOM 7 C4' G A 567 7.284 92.559 136.608 1.00 61.12 C
ATOM 8 O4' G A 567 8.405 91.642 136.541 1.00 59.55 O
ATOM 9 C3' G A 567 7.031 92.972 135.165 1.00 58.64 C
ATOM 10 O3' G A 567 6.430 94.264 135.135 1.00 55.98 O
ATOM 11 C2' G A 567 8.434 92.971 134.568 1.00 58.43 C
ATOM 12 O2' G A 567 9.172 94.136 134.888 1.00 59.28 O
ATOM 13 C1' G A 567 9.074 91.794 135.307 1.00 57.25 C
ATOM 14 N9 G A 567 9.035 90.509 134.624 1.00 54.79 N
ATOM 15 C8 G A 567 7.964 89.659 134.507 1.00 53.40 C
ATOM 16 N7 G A 567 8.259 88.546 133.896 1.00 53.93 N
ATOM 17 C5 G A 567 9.604 88.675 133.578 1.00 53.93 C
ATOM 18 C6 G A 567 10.486 87.779 132.917 1.00 53.80 C
ATOM 19 O6 G A 567 10.253 86.646 132.481 1.00 54.10 O
ATOM 20 N1 G A 567 11.759 88.318 132.791 1.00 53.85 N
ATOM 21 C2 G A 567 12.142 89.555 133.251 1.00 54.71 C
ATOM 22 N2 G A 567 13.421 89.899 133.036 1.00 55.41 N
ATOM 23 N3 G A 567 11.335 90.393 133.876 1.00 53.87 N
ATOM 24 C4 G A 567 10.090 89.891 134.004 1.00 54.25 C
ATOM 25 P A A 568 5.408 94.652 133.958 1.00 56.25 P
ATOM 26 OP1 A A 568 4.709 95.879 134.421 1.00 53.69 O
ATOM 27 OP2 A A 568 4.616 93.453 133.570 1.00 54.14 O
ATOM 28 O5' A A 568 6.350 95.045 132.732 1.00 57.18 O
TER
ATOM 1 O3' G B 565 6.984 84.030 135.239 1.00 71.88 O
ATOM 2 P C B 566 6.855 83.969 136.843 1.00 69.82 P
ATOM 3 OP1 C B 566 8.117 83.426 137.400 1.00 71.36 O
ATOM 4 OP2 C B 566 5.569 83.298 137.156 1.00 71.15 O
ATOM 5 O5' C B 566 6.741 85.494 137.286 1.00 68.75 O
ATOM 6 C5' C B 566 6.325 85.847 138.617 1.00 67.48 C
ATOM 7 C4' C B 566 7.064 87.078 139.093 1.00 67.05 C
ATOM 8 O4' C B 566 8.484 86.793 139.161 1.00 66.92 O
ATOM 9 C3' C B 566 6.971 88.299 138.192 1.00 66.48 C
ATOM 10 O3' C B 566 5.771 89.023 138.461 1.00 66.21 O
ATOM 11 C2' C B 566 8.213 89.098 138.580 1.00 66.01 C
ATOM 12 O2' C B 566 8.017 89.895 139.730 1.00 65.71 O
ATOM 13 C1' C B 566 9.213 87.983 138.910 1.00 65.47 C
ATOM 14 N1 C B 566 10.258 87.701 137.905 1.00 63.86 N
ATOM 15 C2 C B 566 11.426 88.477 137.907 1.00 63.68 C
ATOM 16 O2 C B 566 11.531 89.408 138.720 1.00 64.03 O
ATOM 17 N3 C B 566 12.409 88.193 137.025 1.00 63.26 N
ATOM 18 C4 C B 566 12.260 87.185 136.164 1.00 63.89 C
ATOM 19 N4 C B 566 13.271 86.919 135.332 1.00 62.99 N
ATOM 20 C5 C B 566 11.072 86.397 136.122 1.00 63.56 C
ATOM 21 C6 C B 566 10.107 86.688 136.999 1.00 63.58 C
ATOM 22 P G B 567 4.863 89.547 137.245 1.00 66.72 P
ATOM 23 OP1 G B 567 3.654 90.202 137.817 1.00 66.20 O
ATOM 24 OP2 G B 567 4.705 88.426 136.275 1.00 65.68 O
ATOM 25 O5' G B 567 5.747 90.686 136.569 1.00 65.45 O
TER
ATOM 2 P G A 567 4.863 89.547 137.245 1.00 66.72 P
ATOM 3 OP1 G A 567 3.654 90.202 137.817 1.00 66.20 O
ATOM 4 OP2 G A 567 4.705 88.426 136.275 1.00 65.68 O
ATOM 5 O5' G A 567 5.747 90.686 136.569 1.00 65.45 O
ATOM 6 C5' G A 567 6.130 91.868 137.303 1.00 63.07 C
ATOM 7 C4' G A 567 7.284 92.559 136.608 1.00 61.12 C
ATOM 8 O4' G A 567 8.405 91.642 136.541 1.00 59.55 O
ATOM 9 C3' G A 567 7.031 92.972 135.165 1.00 58.64 C
ATOM 10 O3' G A 567 6.430 94.264 135.135 1.00 55.98 O
ATOM 11 C2' G A 567 8.434 92.971 134.568 1.00 58.43 C
ATOM 12 O2' G A 567 9.172 94.136 134.888 1.00 59.28 O
ATOM 13 C1' G A 567 9.074 91.794 135.307 1.00 57.25 C
ATOM 14 N9 G A 567 9.035 90.509 134.624 1.00 54.79 N
ATOM 15 C8 G A 567 7.964 89.659 134.507 1.00 53.40 C
ATOM 16 N7 G A 567 8.259 88.546 133.896 1.00 53.93 N
ATOM 17 C5 G A 567 9.604 88.675 133.578 1.00 53.93 C
ATOM 18 C6 G A 567 10.486 87.779 132.917 1.00 53.80 C
ATOM 19 O6 G A 567 10.253 86.646 132.481 1.00 54.10 O
ATOM 20 N1 G A 567 11.759 88.318 132.791 1.00 53.85 N
ATOM 21 C2 G A 567 12.142 89.555 133.251 1.00 54.71 C
ATOM 22 N2 G A 567 13.421 89.899 133.036 1.00 55.41 N
ATOM 23 N3 G A 567 11.335 90.393 133.876 1.00 53.87 N
ATOM 24 C4 G A 567 10.090 89.891 134.004 1.00 54.25 C
ATOM 25 P A A 568 5.408 94.652 133.958 1.00 56.25 P
ATOM 26 OP1 A A 568 4.709 95.879 134.421 1.00 53.69 O
ATOM 27 OP2 A A 568 4.616 93.453 133.570 1.00 54.14 O
ATOM 28 O5' A A 568 6.350 95.045 132.732 1.00 57.18 O
TER
ATOM 1 O3' G B 565 6.984 84.030 135.239 1.00 71.88 O
ATOM 2 P C B 566 6.855 83.969 136.843 1.00 69.82 P
ATOM 3 OP1 C B 566 8.117 83.426 137.400 1.00 71.36 O
ATOM 4 OP2 C B 566 5.569 83.298 137.156 1.00 71.15 O
ATOM 5 O5' C B 566 6.741 85.494 137.286 1.00 68.75 O
ATOM 6 C5' C B 566 6.325 85.847 138.617 1.00 67.48 C
ATOM 7 C4' C B 566 7.064 87.078 139.093 1.00 67.05 C
ATOM 8 O4' C B 566 8.484 86.793 139.161 1.00 66.92 O
ATOM 9 C3' C B 566 6.971 88.299 138.192 1.00 66.48 C
ATOM 10 O3' C B 566 5.771 89.023 138.461 1.00 66.21 O
ATOM 11 C2' C B 566 8.213 89.098 138.580 1.00 66.01 C
ATOM 12 O2' C B 566 8.017 89.895 139.730 1.00 65.71 O
ATOM 13 C1' C B 566 9.213 87.983 138.910 1.00 65.47 C
ATOM 14 N1 C B 566 10.258 87.701 137.905 1.00 63.86 N
ATOM 15 C2 C B 566 11.426 88.477 137.907 1.00 63.68 C
ATOM 16 O2 C B 566 11.531 89.408 138.720 1.00 64.03 O
ATOM 17 N3 C B 566 12.409 88.193 137.025 1.00 63.26 N
ATOM 18 C4 C B 566 12.260 87.185 136.164 1.00 63.89 C
ATOM 19 N4 C B 566 13.271 86.919 135.332 1.00 62.99 N
ATOM 20 C5 C B 566 11.072 86.397 136.122 1.00 63.56 C
ATOM 21 C6 C B 566 10.107 86.688 136.999 1.00 63.58 C
ATOM 22 P G B 567 4.863 89.547 137.245 1.00 66.72 P
ATOM 23 OP1 G B 567 3.654 90.202 137.817 1.00 66.20 O
ATOM 24 OP2 G B 567 4.705 88.426 136.275 1.00 65.68 O
ATOM 25 O5' G B 567 5.747 90.686 136.569 1.00 65.45 O
TER
Atoms:
OP1: (3.654,90.202,137.817)
OP2: (4.705,88.426,136.275)
C3': (7.031,92.972,135.165)
C1': (9.074,91.794,135.307)
C5': (6.130,91.868,137.303)
O6: (10.253,86.646,132.481)
O4': (8.405,91.642,136.541)
C8: (7.964,89.659,134.507)
C2: (12.142,89.555,133.251)
C6: (10.486,87.779,132.917)
C5: (9.604,88.675,133.578)
C4: (10.090,89.891,134.004)
P: (4.863,89.547,137.245)
C4': (7.284,92.559,136.608)
C2': (8.434,92.971,134.568)
O2': (9.172,94.136,134.888)
N1: (11.759,88.318,132.791)
N2: (13.421,89.899,133.036)
N3: (11.335,90.393,133.876)
N7: (8.259,88.546,133.896)
N9: (9.035,90.509,134.624)
O5': (5.747,90.686,136.569)
O3': (6.430,94.264,135.135)
OP2: (4.705,88.426,136.275)
C3': (7.031,92.972,135.165)
C1': (9.074,91.794,135.307)
C5': (6.130,91.868,137.303)
O6: (10.253,86.646,132.481)
O4': (8.405,91.642,136.541)
C8: (7.964,89.659,134.507)
C2: (12.142,89.555,133.251)
C6: (10.486,87.779,132.917)
C5: (9.604,88.675,133.578)
C4: (10.090,89.891,134.004)
P: (4.863,89.547,137.245)
C4': (7.284,92.559,136.608)
C2': (8.434,92.971,134.568)
O2': (9.172,94.136,134.888)
N1: (11.759,88.318,132.791)
N2: (13.421,89.899,133.036)
N3: (11.335,90.393,133.876)
N7: (8.259,88.546,133.896)
N9: (9.035,90.509,134.624)
O5': (5.747,90.686,136.569)
O3': (6.430,94.264,135.135)
C2: (11.426,88.477,137.907)
OP1: (8.117,83.426,137.400)
OP2: (5.569,83.298,137.156)
C4: (12.260,87.185,136.164)
O5': (6.741,85.494,137.286)
C3': (6.971,88.299,138.192)
C1': (9.213,87.983,138.910)
O4': (8.484,86.793,139.161)
C5': (6.325,85.847,138.617)
P: (6.855,83.969,136.843)
O2: (11.531,89.408,138.720)
C4': (7.064,87.078,139.093)
C2': (8.213,89.098,138.580)
O2': (8.017,89.895,139.730)
N1: (10.258,87.701,137.905)
N3: (12.409,88.193,137.025)
N4: (13.271,86.919,135.332)
C6: (10.107,86.688,136.999)
C5: (11.072,86.397,136.122)
O3': (5.771,89.023,138.461)
OP1: (8.117,83.426,137.400)
OP2: (5.569,83.298,137.156)
C4: (12.260,87.185,136.164)
O5': (6.741,85.494,137.286)
C3': (6.971,88.299,138.192)
C1': (9.213,87.983,138.910)
O4': (8.484,86.793,139.161)
C5': (6.325,85.847,138.617)
P: (6.855,83.969,136.843)
O2: (11.531,89.408,138.720)
C4': (7.064,87.078,139.093)
C2': (8.213,89.098,138.580)
O2': (8.017,89.895,139.730)
N1: (10.258,87.701,137.905)
N3: (12.409,88.193,137.025)
N4: (13.271,86.919,135.332)
C6: (10.107,86.688,136.999)
C5: (11.072,86.397,136.122)
O3': (5.771,89.023,138.461)
Image (generated by PyMOL):