ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:976:978

Extra

PDB:
ATOM 1 O3' G A 75 45.086 61.839 128.947 1.00 66.80 O
ATOM 2 P A A 76 45.151 63.203 128.079 1.00 66.95 P
ATOM 3 OP1 A A 76 45.935 62.957 126.839 1.00 66.99 O
ATOM 4 OP2 A A 76 45.570 64.285 129.003 1.00 67.70 O
ATOM 5 O5' A A 76 43.648 63.547 127.685 1.00 65.25 O
ATOM 6 C5' A A 76 42.657 62.530 127.597 1.00 63.99 C
ATOM 7 C4' A A 76 41.717 62.821 126.463 1.00 63.31 C
ATOM 8 O4' A A 76 42.464 62.893 125.214 1.00 63.26 O
ATOM 9 C3' A A 76 40.681 61.733 126.261 1.00 64.89 C
ATOM 10 O3' A A 76 39.492 62.312 125.754 1.00 65.11 O
ATOM 11 C2' A A 76 41.337 60.848 125.208 1.00 64.81 C
ATOM 12 O2' A A 76 40.415 60.043 124.499 1.00 67.12 O
ATOM 13 C1' A A 76 41.991 61.903 124.319 1.00 62.97 C
ATOM 14 N9 A A 76 43.112 61.411 123.514 1.00 60.40 N
ATOM 15 C8 A A 76 44.453 61.481 123.786 1.00 59.80 C
ATOM 16 N7 A A 76 45.209 60.939 122.863 1.00 58.93 N
ATOM 17 C5 A A 76 44.305 60.483 121.918 1.00 58.63 C
ATOM 18 C6 A A 76 44.474 59.814 120.694 1.00 59.41 C
ATOM 19 N6 A A 76 45.665 59.465 120.194 1.00 59.66 N
ATOM 20 N1 A A 76 43.365 59.507 119.989 1.00 59.04 N
ATOM 21 C2 A A 76 42.175 59.849 120.492 1.00 58.86 C
ATOM 22 N3 A A 76 41.889 60.475 121.629 1.00 58.66 N
ATOM 23 C4 A A 76 43.011 60.768 122.304 1.00 58.88 C
ATOM 24 P G A 77 38.076 61.824 126.321 1.00 67.86 P
ATOM 25 OP1 G A 77 37.813 62.651 127.535 1.00 65.92 O
ATOM 26 OP2 G A 77 38.109 60.333 126.431 1.00 67.23 O
ATOM 27 O5' G A 77 37.045 62.222 125.171 1.00 64.25 O
TER

ATOM 1 O3' G B 77 39.092 66.061 123.304 1.00 57.57 O
ATOM 2 P U B 78 39.357 67.565 122.805 1.00 57.48 P
ATOM 3 OP1 U B 78 38.359 68.490 123.420 1.00 56.09 O
ATOM 4 OP2 U B 78 39.514 67.538 121.332 1.00 56.44 O
ATOM 5 O5' U B 78 40.792 67.884 123.408 1.00 56.05 O
ATOM 6 C5' U B 78 41.001 67.977 124.823 1.00 54.47 C
ATOM 7 C4' U B 78 42.400 67.537 125.157 1.00 54.72 C
ATOM 8 O4' U B 78 42.507 66.099 125.023 1.00 54.85 O
ATOM 9 C3' U B 78 43.462 68.083 124.224 1.00 54.49 C
ATOM 10 O3' U B 78 43.849 69.384 124.628 1.00 56.19 O
ATOM 11 C2' U B 78 44.574 67.056 124.365 1.00 54.51 C
ATOM 12 O2' U B 78 45.326 67.213 125.550 1.00 55.20 O
ATOM 13 C1' U B 78 43.768 65.761 124.478 1.00 53.96 C
ATOM 14 N1 U B 78 43.549 65.065 123.200 1.00 54.56 N
ATOM 15 C2 U B 78 44.667 64.682 122.476 1.00 54.48 C
ATOM 16 O2 U B 78 45.809 64.921 122.841 1.00 53.29 O
ATOM 17 N3 U B 78 44.400 64.008 121.310 1.00 54.08 N
ATOM 18 C4 U B 78 43.160 63.679 120.803 1.00 55.35 C
ATOM 19 O4 U B 78 43.091 63.009 119.767 1.00 55.05 O
ATOM 20 C5 U B 78 42.049 64.121 121.599 1.00 54.28 C
ATOM 21 C6 U B 78 42.275 64.785 122.736 1.00 53.83 C
ATOM 22 P A B 79 44.040 70.538 123.529 1.00 57.68 P
ATOM 23 OP1 A B 79 44.521 71.734 124.275 1.00 56.03 O
ATOM 24 OP2 A B 79 42.804 70.641 122.701 1.00 55.82 O
ATOM 25 O5' A B 79 45.231 69.983 122.625 1.00 55.63 O
TER

Atoms:
OP1: (45.935,62.957,126.839)
OP2: (45.570,64.285,129.003)
C3': (40.681,61.733,126.261)
C1': (41.991,61.903,124.319)
C5': (42.657,62.530,127.597)
O4': (42.464,62.893,125.214)
C8: (44.453,61.481,123.786)
O2': (40.415,60.043,124.499)
C6: (44.474,59.814,120.694)
C5: (44.305,60.483,121.918)
C4: (43.011,60.768,122.304)
P: (45.151,63.203,128.079)
C4': (41.717,62.821,126.463)
C2': (41.337,60.848,125.208)
C2: (42.175,59.849,120.492)
N1: (43.365,59.507,119.989)
N3: (41.889,60.475,121.629)
N6: (45.665,59.465,120.194)
N7: (45.209,60.939,122.863)
N9: (43.112,61.411,123.514)
O5': (43.648,63.547,127.685)
O3': (39.492,62.312,125.754)
C4: (43.160,63.679,120.803)
N3: (44.400,64.008,121.310)
OP1: (38.359,68.490,123.420)
OP2: (39.514,67.538,121.332)
C2: (44.667,64.682,122.476)
C1': (43.768,65.761,124.478)
C3': (43.462,68.083,124.224)
O5': (40.792,67.884,123.408)
O4': (42.507,66.099,125.023)
C5': (41.001,67.977,124.823)
P: (39.357,67.565,122.805)
C4': (42.400,67.537,125.157)
C2': (44.574,67.056,124.365)
O2': (45.326,67.213,125.550)
N1: (43.549,65.065,123.200)
O4: (43.091,63.009,119.767)
O2: (45.809,64.921,122.841)
C6: (42.275,64.785,122.736)
C5: (42.049,64.121,121.599)
O3': (43.849,69.384,124.628)
Image (generated by PyMOL):
PyMOL image
show in jmol