Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:375:377
Extra
PDB:
ATOM 1 O3' G A 74 31.122 -37.984 4.043 1.00 65.73 O
ATOM 2 P A A 75 32.282 -36.877 3.939 1.00 66.01 P
ATOM 3 OP1 A A 75 31.627 -35.577 3.608 1.00 66.03 O
ATOM 4 OP2 A A 75 33.304 -37.405 3.036 1.00 66.63 O
ATOM 5 O5' A A 75 32.847 -36.846 5.419 1.00 64.96 O
ATOM 6 C5' A A 75 33.911 -35.987 5.779 1.00 64.46 C
ATOM 7 C4' A A 75 35.111 -36.750 6.269 1.00 64.17 C
ATOM 8 O4' A A 75 34.856 -37.330 7.579 1.00 63.44 O
ATOM 9 C3' A A 75 35.571 -37.900 5.386 1.00 64.95 C
ATOM 10 O3' A A 75 36.974 -37.891 5.361 1.00 64.86 O
ATOM 11 C2' A A 75 35.131 -39.123 6.169 1.00 64.72 C
ATOM 12 O2' A A 75 35.871 -40.287 5.875 1.00 65.10 O
ATOM 13 C1' A A 75 35.393 -38.626 7.574 1.00 63.66 C
ATOM 14 N9 A A 75 34.802 -39.416 8.656 1.00 63.16 N
ATOM 15 C8 A A 75 33.619 -39.264 9.316 1.00 62.81 C
ATOM 16 N7 A A 75 33.416 -40.141 10.268 1.00 62.40 N
ATOM 17 C5 A A 75 34.557 -40.924 10.264 1.00 62.45 C
ATOM 18 C6 A A 75 34.961 -42.038 11.045 1.00 62.15 C
ATOM 19 N6 A A 75 34.243 -42.598 12.026 1.00 61.72 N
ATOM 20 N1 A A 75 36.174 -42.573 10.779 1.00 62.33 N
ATOM 21 C2 A A 75 36.904 -42.018 9.797 1.00 62.78 C
ATOM 22 N3 A A 75 36.619 -40.986 8.988 1.00 63.11 N
ATOM 23 C4 A A 75 35.420 -40.471 9.282 1.00 62.92 C
ATOM 24 P G A 76 37.735 -37.559 4.017 1.00 64.04 P
ATOM 25 OP1 G A 76 37.207 -36.266 3.510 1.00 64.17 O
ATOM 26 OP2 G A 76 37.634 -38.750 3.171 1.00 64.87 O
ATOM 27 O5' G A 76 39.226 -37.372 4.505 1.00 63.57 O
TER
ATOM 1 O3' G B 76 38.970 -34.793 8.461 1.00 60.44 O
ATOM 2 P U B 77 39.218 -33.576 9.435 1.00 57.84 P
ATOM 3 OP1 U B 77 40.008 -32.603 8.666 1.00 58.13 O
ATOM 4 OP2 U B 77 39.786 -34.140 10.679 1.00 57.09 O
ATOM 5 O5' U B 77 37.741 -33.005 9.710 1.00 57.68 O
ATOM 6 C5' U B 77 36.856 -32.682 8.641 1.00 58.39 C
ATOM 7 C4' U B 77 35.437 -33.136 8.922 1.00 58.41 C
ATOM 8 O4' U B 77 35.330 -34.539 8.648 1.00 58.84 O
ATOM 9 C3' U B 77 34.942 -33.004 10.363 1.00 57.50 C
ATOM 10 O3' U B 77 34.447 -31.722 10.662 1.00 57.15 O
ATOM 11 C2' U B 77 33.878 -34.070 10.467 1.00 57.72 C
ATOM 12 O2' U B 77 32.671 -33.596 9.925 1.00 58.10 O
ATOM 13 C1' U B 77 34.418 -35.144 9.538 1.00 58.45 C
ATOM 14 N1 U B 77 35.124 -36.193 10.255 1.00 58.12 N
ATOM 15 C2 U B 77 34.500 -36.954 11.216 1.00 57.70 C
ATOM 16 O2 U B 77 33.340 -36.823 11.561 1.00 57.57 O
ATOM 17 N3 U B 77 35.335 -37.902 11.767 1.00 57.45 N
ATOM 18 C4 U B 77 36.661 -38.144 11.461 1.00 57.57 C
ATOM 19 O4 U B 77 37.267 -39.021 12.031 1.00 57.32 O
ATOM 20 C5 U B 77 37.208 -37.326 10.444 1.00 58.02 C
ATOM 21 C6 U B 77 36.438 -36.392 9.896 1.00 58.27 C
ATOM 22 P A B 78 34.956 -30.975 11.979 1.00 56.88 P
ATOM 23 OP1 A B 78 34.492 -29.567 11.886 1.00 56.77 O
ATOM 24 OP2 A B 78 36.413 -31.253 12.089 1.00 56.71 O
ATOM 25 O5' A B 78 34.155 -31.738 13.125 1.00 56.35 O
TER
ATOM 2 P A A 75 32.282 -36.877 3.939 1.00 66.01 P
ATOM 3 OP1 A A 75 31.627 -35.577 3.608 1.00 66.03 O
ATOM 4 OP2 A A 75 33.304 -37.405 3.036 1.00 66.63 O
ATOM 5 O5' A A 75 32.847 -36.846 5.419 1.00 64.96 O
ATOM 6 C5' A A 75 33.911 -35.987 5.779 1.00 64.46 C
ATOM 7 C4' A A 75 35.111 -36.750 6.269 1.00 64.17 C
ATOM 8 O4' A A 75 34.856 -37.330 7.579 1.00 63.44 O
ATOM 9 C3' A A 75 35.571 -37.900 5.386 1.00 64.95 C
ATOM 10 O3' A A 75 36.974 -37.891 5.361 1.00 64.86 O
ATOM 11 C2' A A 75 35.131 -39.123 6.169 1.00 64.72 C
ATOM 12 O2' A A 75 35.871 -40.287 5.875 1.00 65.10 O
ATOM 13 C1' A A 75 35.393 -38.626 7.574 1.00 63.66 C
ATOM 14 N9 A A 75 34.802 -39.416 8.656 1.00 63.16 N
ATOM 15 C8 A A 75 33.619 -39.264 9.316 1.00 62.81 C
ATOM 16 N7 A A 75 33.416 -40.141 10.268 1.00 62.40 N
ATOM 17 C5 A A 75 34.557 -40.924 10.264 1.00 62.45 C
ATOM 18 C6 A A 75 34.961 -42.038 11.045 1.00 62.15 C
ATOM 19 N6 A A 75 34.243 -42.598 12.026 1.00 61.72 N
ATOM 20 N1 A A 75 36.174 -42.573 10.779 1.00 62.33 N
ATOM 21 C2 A A 75 36.904 -42.018 9.797 1.00 62.78 C
ATOM 22 N3 A A 75 36.619 -40.986 8.988 1.00 63.11 N
ATOM 23 C4 A A 75 35.420 -40.471 9.282 1.00 62.92 C
ATOM 24 P G A 76 37.735 -37.559 4.017 1.00 64.04 P
ATOM 25 OP1 G A 76 37.207 -36.266 3.510 1.00 64.17 O
ATOM 26 OP2 G A 76 37.634 -38.750 3.171 1.00 64.87 O
ATOM 27 O5' G A 76 39.226 -37.372 4.505 1.00 63.57 O
TER
ATOM 1 O3' G B 76 38.970 -34.793 8.461 1.00 60.44 O
ATOM 2 P U B 77 39.218 -33.576 9.435 1.00 57.84 P
ATOM 3 OP1 U B 77 40.008 -32.603 8.666 1.00 58.13 O
ATOM 4 OP2 U B 77 39.786 -34.140 10.679 1.00 57.09 O
ATOM 5 O5' U B 77 37.741 -33.005 9.710 1.00 57.68 O
ATOM 6 C5' U B 77 36.856 -32.682 8.641 1.00 58.39 C
ATOM 7 C4' U B 77 35.437 -33.136 8.922 1.00 58.41 C
ATOM 8 O4' U B 77 35.330 -34.539 8.648 1.00 58.84 O
ATOM 9 C3' U B 77 34.942 -33.004 10.363 1.00 57.50 C
ATOM 10 O3' U B 77 34.447 -31.722 10.662 1.00 57.15 O
ATOM 11 C2' U B 77 33.878 -34.070 10.467 1.00 57.72 C
ATOM 12 O2' U B 77 32.671 -33.596 9.925 1.00 58.10 O
ATOM 13 C1' U B 77 34.418 -35.144 9.538 1.00 58.45 C
ATOM 14 N1 U B 77 35.124 -36.193 10.255 1.00 58.12 N
ATOM 15 C2 U B 77 34.500 -36.954 11.216 1.00 57.70 C
ATOM 16 O2 U B 77 33.340 -36.823 11.561 1.00 57.57 O
ATOM 17 N3 U B 77 35.335 -37.902 11.767 1.00 57.45 N
ATOM 18 C4 U B 77 36.661 -38.144 11.461 1.00 57.57 C
ATOM 19 O4 U B 77 37.267 -39.021 12.031 1.00 57.32 O
ATOM 20 C5 U B 77 37.208 -37.326 10.444 1.00 58.02 C
ATOM 21 C6 U B 77 36.438 -36.392 9.896 1.00 58.27 C
ATOM 22 P A B 78 34.956 -30.975 11.979 1.00 56.88 P
ATOM 23 OP1 A B 78 34.492 -29.567 11.886 1.00 56.77 O
ATOM 24 OP2 A B 78 36.413 -31.253 12.089 1.00 56.71 O
ATOM 25 O5' A B 78 34.155 -31.738 13.125 1.00 56.35 O
TER
Atoms:
OP1: (31.627,-35.577,3.608)
OP2: (33.304,-37.405,3.036)
C3': (35.571,-37.900,5.386)
C1': (35.393,-38.626,7.574)
C5': (33.911,-35.987,5.779)
O4': (34.856,-37.330,7.579)
C8: (33.619,-39.264,9.316)
O2': (35.871,-40.287,5.875)
C6: (34.961,-42.038,11.045)
C5: (34.557,-40.924,10.264)
C4: (35.420,-40.471,9.282)
P: (32.282,-36.877,3.939)
C4': (35.111,-36.750,6.269)
C2': (35.131,-39.123,6.169)
C2: (36.904,-42.018,9.797)
N1: (36.174,-42.573,10.779)
N3: (36.619,-40.986,8.988)
N6: (34.243,-42.598,12.026)
N7: (33.416,-40.141,10.268)
N9: (34.802,-39.416,8.656)
O5': (32.847,-36.846,5.419)
O3': (36.974,-37.891,5.361)
OP2: (33.304,-37.405,3.036)
C3': (35.571,-37.900,5.386)
C1': (35.393,-38.626,7.574)
C5': (33.911,-35.987,5.779)
O4': (34.856,-37.330,7.579)
C8: (33.619,-39.264,9.316)
O2': (35.871,-40.287,5.875)
C6: (34.961,-42.038,11.045)
C5: (34.557,-40.924,10.264)
C4: (35.420,-40.471,9.282)
P: (32.282,-36.877,3.939)
C4': (35.111,-36.750,6.269)
C2': (35.131,-39.123,6.169)
C2: (36.904,-42.018,9.797)
N1: (36.174,-42.573,10.779)
N3: (36.619,-40.986,8.988)
N6: (34.243,-42.598,12.026)
N7: (33.416,-40.141,10.268)
N9: (34.802,-39.416,8.656)
O5': (32.847,-36.846,5.419)
O3': (36.974,-37.891,5.361)
C4: (36.661,-38.144,11.461)
N3: (35.335,-37.902,11.767)
OP1: (40.008,-32.603,8.666)
OP2: (39.786,-34.140,10.679)
C2: (34.500,-36.954,11.216)
C1': (34.418,-35.144,9.538)
C3': (34.942,-33.004,10.363)
O5': (37.741,-33.005,9.710)
O4': (35.330,-34.539,8.648)
C5': (36.856,-32.682,8.641)
P: (39.218,-33.576,9.435)
C4': (35.437,-33.136,8.922)
C2': (33.878,-34.070,10.467)
O2': (32.671,-33.596,9.925)
N1: (35.124,-36.193,10.255)
O4: (37.267,-39.021,12.031)
O2: (33.340,-36.823,11.561)
C6: (36.438,-36.392,9.896)
C5: (37.208,-37.326,10.444)
O3': (34.447,-31.722,10.662)
N3: (35.335,-37.902,11.767)
OP1: (40.008,-32.603,8.666)
OP2: (39.786,-34.140,10.679)
C2: (34.500,-36.954,11.216)
C1': (34.418,-35.144,9.538)
C3': (34.942,-33.004,10.363)
O5': (37.741,-33.005,9.710)
O4': (35.330,-34.539,8.648)
C5': (36.856,-32.682,8.641)
P: (39.218,-33.576,9.435)
C4': (35.437,-33.136,8.922)
C2': (33.878,-34.070,10.467)
O2': (32.671,-33.596,9.925)
N1: (35.124,-36.193,10.255)
O4: (37.267,-39.021,12.031)
O2: (33.340,-36.823,11.561)
C6: (36.438,-36.392,9.896)
C5: (37.208,-37.326,10.444)
O3': (34.447,-31.722,10.662)
Image (generated by PyMOL):