ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QA4:0345:0347

Extra

PDB:
ATOM 1 O3' C A 344 53.856 121.096 16.028 1.00105.35 O
ATOM 2 P A A 345 54.957 120.736 14.907 1.00106.54 P
ATOM 3 OP1 A A 345 54.257 120.112 13.750 1.00107.26 O
ATOM 4 OP2 A A 345 56.057 120.005 15.581 1.00106.57 O
ATOM 5 O5' A A 345 55.536 122.137 14.427 1.00107.74 O
ATOM 6 C5' A A 345 56.710 122.197 13.605 1.00110.19 C
ATOM 7 C4' A A 345 56.739 123.490 12.835 1.00112.06 C
ATOM 8 O4' A A 345 55.659 123.495 11.861 1.00112.37 O
ATOM 9 C3' A A 345 56.559 124.749 13.674 1.00113.80 C
ATOM 10 O3' A A 345 57.310 125.796 13.093 1.00117.34 O
ATOM 11 C2' A A 345 55.076 125.051 13.503 1.00113.58 C
ATOM 12 O2' A A 345 54.771 126.418 13.690 1.00113.84 O
ATOM 13 C1' A A 345 54.861 124.646 12.048 1.00112.92 C
ATOM 14 N9 A A 345 53.474 124.316 11.714 1.00112.72 N
ATOM 15 C8 A A 345 52.715 123.272 12.186 1.00113.17 C
ATOM 16 N7 A A 345 51.493 123.245 11.707 1.00113.06 N
ATOM 17 C5 A A 345 51.442 124.344 10.860 1.00112.81 C
ATOM 18 C6 A A 345 50.415 124.871 10.044 1.00112.66 C
ATOM 19 N6 A A 345 49.189 124.341 9.951 1.00112.01 N
ATOM 20 N1 A A 345 50.697 125.976 9.319 1.00112.14 N
ATOM 21 C2 A A 345 51.925 126.509 9.412 1.00111.69 C
ATOM 22 N3 A A 345 52.968 126.109 10.140 1.00111.65 N
ATOM 23 C4 A A 345 52.658 125.010 10.850 1.00112.49 C
ATOM 24 P G A 346 58.744 126.175 13.696 1.00120.20 P
ATOM 25 OP1 G A 346 59.206 125.025 14.514 1.00120.37 O
ATOM 26 OP2 G A 346 58.650 127.527 14.309 1.00119.80 O
ATOM 27 O5' G A 346 59.675 126.248 12.404 1.00123.44 O
TER

ATOM 1 O3' G B 346 59.490 124.149 8.849 1.00129.98 O
ATOM 2 P U B 347 60.447 123.053 8.147 1.00130.30 P
ATOM 3 OP1 U B 347 61.726 122.960 8.895 1.00130.38 O
ATOM 4 OP2 U B 347 60.473 123.326 6.688 1.00130.40 O
ATOM 5 O5' U B 347 59.642 121.687 8.330 1.00130.37 O
ATOM 6 C5' U B 347 59.833 120.855 9.497 1.00130.83 C
ATOM 7 C4' U B 347 58.517 120.246 9.937 1.00130.75 C
ATOM 8 O4' U B 347 57.633 121.289 10.411 1.00130.25 O
ATOM 9 C3' U B 347 57.724 119.527 8.857 1.00131.18 C
ATOM 10 O3' U B 347 58.194 118.184 8.715 1.00132.02 O
ATOM 11 C2' U B 347 56.293 119.600 9.387 1.00130.70 C
ATOM 12 O2' U B 347 55.973 118.623 10.352 1.00131.12 O
ATOM 13 C1' U B 347 56.295 120.956 10.092 1.00130.46 C
ATOM 14 N1 U B 347 55.721 122.042 9.295 1.00130.59 N
ATOM 15 C2 U B 347 54.351 122.061 9.145 1.00130.80 C
ATOM 16 O2 U B 347 53.617 121.202 9.623 1.00130.46 O
ATOM 17 N3 U B 347 53.871 123.120 8.413 1.00130.81 N
ATOM 18 C4 U B 347 54.610 124.131 7.827 1.00130.40 C
ATOM 19 O4 U B 347 54.031 125.025 7.214 1.00130.82 O
ATOM 20 C5 U B 347 56.019 124.027 8.019 1.00130.36 C
ATOM 21 C6 U B 347 56.515 123.012 8.727 1.00130.54 C
ATOM 22 P A B 348 58.201 117.480 7.270 1.00132.42 P
ATOM 23 OP1 A B 348 58.957 116.205 7.397 1.00132.05 O
ATOM 24 OP2 A B 348 58.628 118.490 6.266 1.00132.34 O
ATOM 25 O5' A B 348 56.670 117.122 7.014 1.00133.09 O
TER

Atoms:
OP1: (54.257,120.112,13.750)
OP2: (56.057,120.005,15.581)
C3': (56.559,124.749,13.674)
C1': (54.861,124.646,12.048)
C5': (56.710,122.197,13.605)
O4': (55.659,123.495,11.861)
C8: (52.715,123.272,12.186)
O2': (54.771,126.418,13.690)
C6: (50.415,124.871,10.044)
C5: (51.442,124.344,10.860)
C4: (52.658,125.010,10.850)
P: (54.957,120.736,14.907)
C4': (56.739,123.490,12.835)
C2': (55.076,125.051,13.503)
C2: (51.925,126.509,9.412)
N1: (50.697,125.976,9.319)
N3: (52.968,126.109,10.140)
N6: (49.189,124.341,9.951)
N7: (51.493,123.245,11.707)
N9: (53.474,124.316,11.714)
O5': (55.536,122.137,14.427)
O3': (57.310,125.796,13.093)
C4: (54.610,124.131,7.827)
N3: (53.871,123.120,8.413)
OP1: (61.726,122.960,8.895)
OP2: (60.473,123.326,6.688)
C2: (54.351,122.061,9.145)
C1': (56.295,120.956,10.092)
C3': (57.724,119.527,8.857)
O5': (59.642,121.687,8.330)
O4': (57.633,121.289,10.411)
C5': (59.833,120.855,9.497)
P: (60.447,123.053,8.147)
C4': (58.517,120.246,9.937)
C2': (56.293,119.600,9.387)
O2': (55.973,118.623,10.352)
N1: (55.721,122.042,9.295)
O4: (54.031,125.025,7.214)
O2: (53.617,121.202,9.623)
C6: (56.515,123.012,8.727)
C5: (56.019,124.027,8.019)
O3': (58.194,118.184,8.715)
Image (generated by PyMOL):
PyMOL image
show in jmol