Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A2559:A2561
Extra
PDB:
ATOM 1 O3' U A2558 61.490 -46.270 145.411 1.00123.54 O
ATOM 2 P A A2559 60.657 -45.909 146.736 1.00122.01 P
ATOM 3 OP1 A A2559 59.672 -46.984 147.012 1.00115.87 O
ATOM 4 OP2 A A2559 60.184 -44.514 146.558 1.00132.42 O
ATOM 5 O5' A A2559 61.737 -45.913 147.909 1.00114.18 O
ATOM 6 C5' A A2559 61.375 -45.444 149.203 1.00116.65 C
ATOM 7 C4' A A2559 61.319 -46.592 150.174 1.00116.19 C
ATOM 8 O4' A A2559 60.607 -47.674 149.557 1.00120.14 O
ATOM 9 C3' A A2559 62.676 -47.118 150.581 1.00117.95 C
ATOM 10 O3' A A2559 62.794 -46.577 151.890 1.00117.78 O
ATOM 11 C2' A A2559 62.499 -48.637 150.684 1.00119.72 C
ATOM 12 O2' A A2559 62.421 -49.109 152.011 1.00126.74 O
ATOM 13 C1' A A2559 61.195 -48.899 149.926 1.00120.83 C
ATOM 14 N9 A A2559 61.195 -49.769 148.748 1.00120.06 N
ATOM 15 C8 A A2559 61.136 -49.356 147.441 1.00119.64 C
ATOM 16 N7 A A2559 60.958 -50.327 146.585 1.00116.32 N
ATOM 17 C5 A A2559 60.934 -51.463 147.373 1.00115.33 C
ATOM 18 C6 A A2559 60.743 -52.804 147.063 1.00117.30 C
ATOM 19 N6 A A2559 60.490 -53.240 145.823 1.00117.07 N
ATOM 20 N1 A A2559 60.799 -53.698 148.072 1.00119.02 N
ATOM 21 C2 A A2559 61.025 -53.249 149.311 1.00118.87 C
ATOM 22 N3 A A2559 61.200 -52.003 149.734 1.00117.98 N
ATOM 23 C4 A A2559 61.134 -51.143 148.704 1.00115.59 C
ATOM 24 P G A2560 64.215 -46.455 152.601 1.00121.00 P
ATOM 25 OP1 G A2560 64.654 -45.044 152.440 1.00120.28 O
ATOM 26 OP2 G A2560 65.104 -47.569 152.143 1.00118.54 O
ATOM 27 O5' G A2560 63.875 -46.689 154.139 1.00125.42 O
TER
ATOM 1 O3' G B2560 59.154 -47.342 154.324 1.00133.40 O
ATOM 2 P U B2561 57.640 -46.944 154.698 1.00119.91 P
ATOM 3 OP1 U B2561 57.614 -45.553 155.224 1.00123.89 O
ATOM 4 OP2 U B2561 57.035 -48.037 155.501 1.00128.09 O
ATOM 5 O5' U B2561 56.913 -46.980 153.290 1.00113.37 O
ATOM 6 C5' U B2561 57.293 -46.093 152.246 1.00119.49 C
ATOM 7 C4' U B2561 56.517 -46.417 151.001 1.00122.32 C
ATOM 8 O4' U B2561 57.303 -47.315 150.189 1.00120.27 O
ATOM 9 C3' U B2561 55.168 -47.074 151.295 1.00125.59 C
ATOM 10 O3' U B2561 54.033 -46.306 150.898 1.00128.93 O
ATOM 11 C2' U B2561 55.193 -48.425 150.587 1.00125.84 C
ATOM 12 O2' U B2561 54.197 -48.514 149.598 1.00123.94 O
ATOM 13 C1' U B2561 56.567 -48.486 149.918 1.00124.26 C
ATOM 14 N1 U B2561 57.336 -49.672 150.337 1.00124.53 N
ATOM 15 C2 U B2561 57.388 -50.757 149.460 1.00120.53 C
ATOM 16 O2 U B2561 56.886 -50.744 148.345 1.00118.11 O
ATOM 17 N3 U B2561 58.048 -51.859 149.939 1.00121.23 N
ATOM 18 C4 U B2561 58.644 -52.006 151.174 1.00127.38 C
ATOM 19 O4 U B2561 59.007 -53.131 151.535 1.00131.04 O
ATOM 20 C5 U B2561 58.594 -50.837 152.002 1.00126.77 C
ATOM 21 C6 U B2561 57.958 -49.738 151.569 1.00126.25 C
ATOM 22 P A B2562 52.609 -46.554 151.617 1.00130.71 P
ATOM 23 OP1 A B2562 51.769 -45.344 151.413 1.00125.96 O
ATOM 24 OP2 A B2562 52.871 -47.041 153.001 1.00121.27 O
ATOM 25 O5' A B2562 51.952 -47.761 150.803 1.00128.59 O
TER
ATOM 2 P A A2559 60.657 -45.909 146.736 1.00122.01 P
ATOM 3 OP1 A A2559 59.672 -46.984 147.012 1.00115.87 O
ATOM 4 OP2 A A2559 60.184 -44.514 146.558 1.00132.42 O
ATOM 5 O5' A A2559 61.737 -45.913 147.909 1.00114.18 O
ATOM 6 C5' A A2559 61.375 -45.444 149.203 1.00116.65 C
ATOM 7 C4' A A2559 61.319 -46.592 150.174 1.00116.19 C
ATOM 8 O4' A A2559 60.607 -47.674 149.557 1.00120.14 O
ATOM 9 C3' A A2559 62.676 -47.118 150.581 1.00117.95 C
ATOM 10 O3' A A2559 62.794 -46.577 151.890 1.00117.78 O
ATOM 11 C2' A A2559 62.499 -48.637 150.684 1.00119.72 C
ATOM 12 O2' A A2559 62.421 -49.109 152.011 1.00126.74 O
ATOM 13 C1' A A2559 61.195 -48.899 149.926 1.00120.83 C
ATOM 14 N9 A A2559 61.195 -49.769 148.748 1.00120.06 N
ATOM 15 C8 A A2559 61.136 -49.356 147.441 1.00119.64 C
ATOM 16 N7 A A2559 60.958 -50.327 146.585 1.00116.32 N
ATOM 17 C5 A A2559 60.934 -51.463 147.373 1.00115.33 C
ATOM 18 C6 A A2559 60.743 -52.804 147.063 1.00117.30 C
ATOM 19 N6 A A2559 60.490 -53.240 145.823 1.00117.07 N
ATOM 20 N1 A A2559 60.799 -53.698 148.072 1.00119.02 N
ATOM 21 C2 A A2559 61.025 -53.249 149.311 1.00118.87 C
ATOM 22 N3 A A2559 61.200 -52.003 149.734 1.00117.98 N
ATOM 23 C4 A A2559 61.134 -51.143 148.704 1.00115.59 C
ATOM 24 P G A2560 64.215 -46.455 152.601 1.00121.00 P
ATOM 25 OP1 G A2560 64.654 -45.044 152.440 1.00120.28 O
ATOM 26 OP2 G A2560 65.104 -47.569 152.143 1.00118.54 O
ATOM 27 O5' G A2560 63.875 -46.689 154.139 1.00125.42 O
TER
ATOM 1 O3' G B2560 59.154 -47.342 154.324 1.00133.40 O
ATOM 2 P U B2561 57.640 -46.944 154.698 1.00119.91 P
ATOM 3 OP1 U B2561 57.614 -45.553 155.224 1.00123.89 O
ATOM 4 OP2 U B2561 57.035 -48.037 155.501 1.00128.09 O
ATOM 5 O5' U B2561 56.913 -46.980 153.290 1.00113.37 O
ATOM 6 C5' U B2561 57.293 -46.093 152.246 1.00119.49 C
ATOM 7 C4' U B2561 56.517 -46.417 151.001 1.00122.32 C
ATOM 8 O4' U B2561 57.303 -47.315 150.189 1.00120.27 O
ATOM 9 C3' U B2561 55.168 -47.074 151.295 1.00125.59 C
ATOM 10 O3' U B2561 54.033 -46.306 150.898 1.00128.93 O
ATOM 11 C2' U B2561 55.193 -48.425 150.587 1.00125.84 C
ATOM 12 O2' U B2561 54.197 -48.514 149.598 1.00123.94 O
ATOM 13 C1' U B2561 56.567 -48.486 149.918 1.00124.26 C
ATOM 14 N1 U B2561 57.336 -49.672 150.337 1.00124.53 N
ATOM 15 C2 U B2561 57.388 -50.757 149.460 1.00120.53 C
ATOM 16 O2 U B2561 56.886 -50.744 148.345 1.00118.11 O
ATOM 17 N3 U B2561 58.048 -51.859 149.939 1.00121.23 N
ATOM 18 C4 U B2561 58.644 -52.006 151.174 1.00127.38 C
ATOM 19 O4 U B2561 59.007 -53.131 151.535 1.00131.04 O
ATOM 20 C5 U B2561 58.594 -50.837 152.002 1.00126.77 C
ATOM 21 C6 U B2561 57.958 -49.738 151.569 1.00126.25 C
ATOM 22 P A B2562 52.609 -46.554 151.617 1.00130.71 P
ATOM 23 OP1 A B2562 51.769 -45.344 151.413 1.00125.96 O
ATOM 24 OP2 A B2562 52.871 -47.041 153.001 1.00121.27 O
ATOM 25 O5' A B2562 51.952 -47.761 150.803 1.00128.59 O
TER
Atoms:
OP1: (59.672,-46.984,147.012)
OP2: (60.184,-44.514,146.558)
C3': (62.676,-47.118,150.581)
C1': (61.195,-48.899,149.926)
C5': (61.375,-45.444,149.203)
O4': (60.607,-47.674,149.557)
C8: (61.136,-49.356,147.441)
O2': (62.421,-49.109,152.011)
C6: (60.743,-52.804,147.063)
C5: (60.934,-51.463,147.373)
C4: (61.134,-51.143,148.704)
P: (60.657,-45.909,146.736)
C4': (61.319,-46.592,150.174)
C2': (62.499,-48.637,150.684)
C2: (61.025,-53.249,149.311)
N1: (60.799,-53.698,148.072)
N3: (61.200,-52.003,149.734)
N6: (60.490,-53.240,145.823)
N7: (60.958,-50.327,146.585)
N9: (61.195,-49.769,148.748)
O5': (61.737,-45.913,147.909)
O3': (62.794,-46.577,151.890)
OP2: (60.184,-44.514,146.558)
C3': (62.676,-47.118,150.581)
C1': (61.195,-48.899,149.926)
C5': (61.375,-45.444,149.203)
O4': (60.607,-47.674,149.557)
C8: (61.136,-49.356,147.441)
O2': (62.421,-49.109,152.011)
C6: (60.743,-52.804,147.063)
C5: (60.934,-51.463,147.373)
C4: (61.134,-51.143,148.704)
P: (60.657,-45.909,146.736)
C4': (61.319,-46.592,150.174)
C2': (62.499,-48.637,150.684)
C2: (61.025,-53.249,149.311)
N1: (60.799,-53.698,148.072)
N3: (61.200,-52.003,149.734)
N6: (60.490,-53.240,145.823)
N7: (60.958,-50.327,146.585)
N9: (61.195,-49.769,148.748)
O5': (61.737,-45.913,147.909)
O3': (62.794,-46.577,151.890)
C4: (58.644,-52.006,151.174)
N3: (58.048,-51.859,149.939)
OP1: (57.614,-45.553,155.224)
OP2: (57.035,-48.037,155.501)
C2: (57.388,-50.757,149.460)
C1': (56.567,-48.486,149.918)
C3': (55.168,-47.074,151.295)
O5': (56.913,-46.980,153.290)
O4': (57.303,-47.315,150.189)
C5': (57.293,-46.093,152.246)
P: (57.640,-46.944,154.698)
C4': (56.517,-46.417,151.001)
C2': (55.193,-48.425,150.587)
O2': (54.197,-48.514,149.598)
N1: (57.336,-49.672,150.337)
O4: (59.007,-53.131,151.535)
O2: (56.886,-50.744,148.345)
C6: (57.958,-49.738,151.569)
C5: (58.594,-50.837,152.002)
O3': (54.033,-46.306,150.898)
N3: (58.048,-51.859,149.939)
OP1: (57.614,-45.553,155.224)
OP2: (57.035,-48.037,155.501)
C2: (57.388,-50.757,149.460)
C1': (56.567,-48.486,149.918)
C3': (55.168,-47.074,151.295)
O5': (56.913,-46.980,153.290)
O4': (57.303,-47.315,150.189)
C5': (57.293,-46.093,152.246)
P: (57.640,-46.944,154.698)
C4': (56.517,-46.417,151.001)
C2': (55.193,-48.425,150.587)
O2': (54.197,-48.514,149.598)
N1: (57.336,-49.672,150.337)
O4: (59.007,-53.131,151.535)
O2: (56.886,-50.744,148.345)
C6: (57.958,-49.738,151.569)
C5: (58.594,-50.837,152.002)
O3': (54.033,-46.306,150.898)
Image (generated by PyMOL):