Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A456:A458
Extra
PDB:
ATOM 1 O3' C A 455 -36.246 -75.334 39.234 1.00 2.73 O
ATOM 2 P A A 456 -37.694 -74.941 38.787 1.00 0.01 P
ATOM 3 OP1 A A 456 -38.519 -76.182 38.821 1.00 0.01 O
ATOM 4 OP2 A A 456 -37.539 -74.199 37.508 1.00 0.01 O
ATOM 5 O5' A A 456 -38.156 -73.964 39.931 1.00 0.01 O
ATOM 6 C5' A A 456 -38.185 -72.564 39.704 1.00 0.01 C
ATOM 7 C4' A A 456 -39.488 -71.999 40.142 1.00 0.01 C
ATOM 8 O4' A A 456 -40.460 -72.167 39.069 1.00 0.01 O
ATOM 9 C3' A A 456 -40.092 -72.716 41.345 1.00 0.01 C
ATOM 10 O3' A A 456 -40.960 -71.833 42.012 1.00 0.01 O
ATOM 11 C2' A A 456 -40.940 -73.766 40.682 1.00 0.01 C
ATOM 12 O2' A A 456 -41.934 -74.314 41.520 1.00 0.01 O
ATOM 13 C1' A A 456 -41.541 -72.919 39.571 1.00 0.01 C
ATOM 14 N9 A A 456 -42.151 -73.676 38.504 1.00 0.01 N
ATOM 15 C8 A A 456 -41.605 -74.617 37.717 1.00 0.01 C
ATOM 16 N7 A A 456 -42.466 -75.129 36.881 1.00 0.01 N
ATOM 17 C5 A A 456 -43.640 -74.501 37.186 1.00 0.01 C
ATOM 18 C6 A A 456 -44.898 -74.633 36.652 1.00 0.01 C
ATOM 19 N6 A A 456 -45.117 -75.495 35.681 1.00 0.01 N
ATOM 20 N1 A A 456 -45.886 -73.874 37.127 1.00 0.01 N
ATOM 21 C2 A A 456 -45.575 -73.034 38.109 1.00 0.01 C
ATOM 22 N3 A A 456 -44.406 -72.814 38.707 1.00 0.01 N
ATOM 23 C4 A A 456 -43.465 -73.598 38.183 1.00 0.01 C
ATOM 24 P G A 457 -40.669 -71.380 43.486 1.00 0.01 P
ATOM 25 OP1 G A 457 -39.224 -71.099 43.552 1.00 0.01 O
ATOM 26 OP2 G A 457 -41.246 -72.405 44.376 1.00 0.01 O
ATOM 27 O5' G A 457 -41.511 -70.019 43.587 1.00 0.01 O
TER
ATOM 1 O3' G B 457 -40.910 -67.160 39.773 1.00 0.01 O
ATOM 2 P U B 458 -39.993 -66.054 39.121 1.00 0.01 P
ATOM 3 OP1 U B 458 -39.200 -65.471 40.181 1.00 0.01 O
ATOM 4 OP2 U B 458 -40.846 -65.176 38.318 1.00 0.01 O
ATOM 5 O5' U B 458 -39.066 -66.913 38.184 1.00 0.01 O
ATOM 6 C5' U B 458 -37.917 -67.540 38.707 1.00 0.01 C
ATOM 7 C4' U B 458 -37.551 -68.771 37.931 1.00 0.01 C
ATOM 8 O4' U B 458 -38.483 -69.825 38.221 1.00 0.01 O
ATOM 9 C3' U B 458 -37.574 -68.643 36.429 1.00 0.01 C
ATOM 10 O3' U B 458 -36.376 -68.090 35.940 1.00 0.01 O
ATOM 11 C2' U B 458 -37.800 -70.079 35.978 1.00 0.01 C
ATOM 12 O2' U B 458 -36.580 -70.810 35.963 1.00 0.01 O
ATOM 13 C1' U B 458 -38.653 -70.634 37.102 1.00 0.01 C
ATOM 14 N1 U B 458 -40.071 -70.673 36.781 1.00 0.01 N
ATOM 15 C2 U B 458 -40.485 -71.515 35.778 1.00 0.01 C
ATOM 16 O2 U B 458 -39.710 -72.172 35.092 1.00 0.01 O
ATOM 17 N3 U B 458 -41.834 -71.507 35.613 1.00 0.01 N
ATOM 18 C4 U B 458 -42.720 -70.785 36.356 1.00 0.01 C
ATOM 19 O4 U B 458 -43.888 -70.876 36.097 1.00 0.01 O
ATOM 20 C5 U B 458 -42.220 -69.968 37.382 1.00 0.01 C
ATOM 21 C6 U B 458 -40.925 -69.953 37.560 1.00 0.01 C
ATOM 22 P A B 459 -36.384 -66.929 34.843 1.00 0.01 P
ATOM 23 OP1 A B 459 -35.010 -66.440 34.741 1.00 0.01 O
ATOM 24 OP2 A B 459 -37.452 -65.962 35.206 1.00 0.01 O
ATOM 25 O5' A B 459 -36.758 -67.715 33.529 1.00 0.01 O
TER
ATOM 2 P A A 456 -37.694 -74.941 38.787 1.00 0.01 P
ATOM 3 OP1 A A 456 -38.519 -76.182 38.821 1.00 0.01 O
ATOM 4 OP2 A A 456 -37.539 -74.199 37.508 1.00 0.01 O
ATOM 5 O5' A A 456 -38.156 -73.964 39.931 1.00 0.01 O
ATOM 6 C5' A A 456 -38.185 -72.564 39.704 1.00 0.01 C
ATOM 7 C4' A A 456 -39.488 -71.999 40.142 1.00 0.01 C
ATOM 8 O4' A A 456 -40.460 -72.167 39.069 1.00 0.01 O
ATOM 9 C3' A A 456 -40.092 -72.716 41.345 1.00 0.01 C
ATOM 10 O3' A A 456 -40.960 -71.833 42.012 1.00 0.01 O
ATOM 11 C2' A A 456 -40.940 -73.766 40.682 1.00 0.01 C
ATOM 12 O2' A A 456 -41.934 -74.314 41.520 1.00 0.01 O
ATOM 13 C1' A A 456 -41.541 -72.919 39.571 1.00 0.01 C
ATOM 14 N9 A A 456 -42.151 -73.676 38.504 1.00 0.01 N
ATOM 15 C8 A A 456 -41.605 -74.617 37.717 1.00 0.01 C
ATOM 16 N7 A A 456 -42.466 -75.129 36.881 1.00 0.01 N
ATOM 17 C5 A A 456 -43.640 -74.501 37.186 1.00 0.01 C
ATOM 18 C6 A A 456 -44.898 -74.633 36.652 1.00 0.01 C
ATOM 19 N6 A A 456 -45.117 -75.495 35.681 1.00 0.01 N
ATOM 20 N1 A A 456 -45.886 -73.874 37.127 1.00 0.01 N
ATOM 21 C2 A A 456 -45.575 -73.034 38.109 1.00 0.01 C
ATOM 22 N3 A A 456 -44.406 -72.814 38.707 1.00 0.01 N
ATOM 23 C4 A A 456 -43.465 -73.598 38.183 1.00 0.01 C
ATOM 24 P G A 457 -40.669 -71.380 43.486 1.00 0.01 P
ATOM 25 OP1 G A 457 -39.224 -71.099 43.552 1.00 0.01 O
ATOM 26 OP2 G A 457 -41.246 -72.405 44.376 1.00 0.01 O
ATOM 27 O5' G A 457 -41.511 -70.019 43.587 1.00 0.01 O
TER
ATOM 1 O3' G B 457 -40.910 -67.160 39.773 1.00 0.01 O
ATOM 2 P U B 458 -39.993 -66.054 39.121 1.00 0.01 P
ATOM 3 OP1 U B 458 -39.200 -65.471 40.181 1.00 0.01 O
ATOM 4 OP2 U B 458 -40.846 -65.176 38.318 1.00 0.01 O
ATOM 5 O5' U B 458 -39.066 -66.913 38.184 1.00 0.01 O
ATOM 6 C5' U B 458 -37.917 -67.540 38.707 1.00 0.01 C
ATOM 7 C4' U B 458 -37.551 -68.771 37.931 1.00 0.01 C
ATOM 8 O4' U B 458 -38.483 -69.825 38.221 1.00 0.01 O
ATOM 9 C3' U B 458 -37.574 -68.643 36.429 1.00 0.01 C
ATOM 10 O3' U B 458 -36.376 -68.090 35.940 1.00 0.01 O
ATOM 11 C2' U B 458 -37.800 -70.079 35.978 1.00 0.01 C
ATOM 12 O2' U B 458 -36.580 -70.810 35.963 1.00 0.01 O
ATOM 13 C1' U B 458 -38.653 -70.634 37.102 1.00 0.01 C
ATOM 14 N1 U B 458 -40.071 -70.673 36.781 1.00 0.01 N
ATOM 15 C2 U B 458 -40.485 -71.515 35.778 1.00 0.01 C
ATOM 16 O2 U B 458 -39.710 -72.172 35.092 1.00 0.01 O
ATOM 17 N3 U B 458 -41.834 -71.507 35.613 1.00 0.01 N
ATOM 18 C4 U B 458 -42.720 -70.785 36.356 1.00 0.01 C
ATOM 19 O4 U B 458 -43.888 -70.876 36.097 1.00 0.01 O
ATOM 20 C5 U B 458 -42.220 -69.968 37.382 1.00 0.01 C
ATOM 21 C6 U B 458 -40.925 -69.953 37.560 1.00 0.01 C
ATOM 22 P A B 459 -36.384 -66.929 34.843 1.00 0.01 P
ATOM 23 OP1 A B 459 -35.010 -66.440 34.741 1.00 0.01 O
ATOM 24 OP2 A B 459 -37.452 -65.962 35.206 1.00 0.01 O
ATOM 25 O5' A B 459 -36.758 -67.715 33.529 1.00 0.01 O
TER
Atoms:
OP1: (-38.519,-76.182,38.821)
OP2: (-37.539,-74.199,37.508)
C3': (-40.092,-72.716,41.345)
C1': (-41.541,-72.919,39.571)
C5': (-38.185,-72.564,39.704)
O4': (-40.460,-72.167,39.069)
C8: (-41.605,-74.617,37.717)
O2': (-41.934,-74.314,41.520)
C6: (-44.898,-74.633,36.652)
C5: (-43.640,-74.501,37.186)
C4: (-43.465,-73.598,38.183)
P: (-37.694,-74.941,38.787)
C4': (-39.488,-71.999,40.142)
C2': (-40.940,-73.766,40.682)
C2: (-45.575,-73.034,38.109)
N1: (-45.886,-73.874,37.127)
N3: (-44.406,-72.814,38.707)
N6: (-45.117,-75.495,35.681)
N7: (-42.466,-75.129,36.881)
N9: (-42.151,-73.676,38.504)
O5': (-38.156,-73.964,39.931)
O3': (-40.960,-71.833,42.012)
OP2: (-37.539,-74.199,37.508)
C3': (-40.092,-72.716,41.345)
C1': (-41.541,-72.919,39.571)
C5': (-38.185,-72.564,39.704)
O4': (-40.460,-72.167,39.069)
C8: (-41.605,-74.617,37.717)
O2': (-41.934,-74.314,41.520)
C6: (-44.898,-74.633,36.652)
C5: (-43.640,-74.501,37.186)
C4: (-43.465,-73.598,38.183)
P: (-37.694,-74.941,38.787)
C4': (-39.488,-71.999,40.142)
C2': (-40.940,-73.766,40.682)
C2: (-45.575,-73.034,38.109)
N1: (-45.886,-73.874,37.127)
N3: (-44.406,-72.814,38.707)
N6: (-45.117,-75.495,35.681)
N7: (-42.466,-75.129,36.881)
N9: (-42.151,-73.676,38.504)
O5': (-38.156,-73.964,39.931)
O3': (-40.960,-71.833,42.012)
C4: (-42.720,-70.785,36.356)
N3: (-41.834,-71.507,35.613)
OP1: (-39.200,-65.471,40.181)
OP2: (-40.846,-65.176,38.318)
C2: (-40.485,-71.515,35.778)
C1': (-38.653,-70.634,37.102)
C3': (-37.574,-68.643,36.429)
O5': (-39.066,-66.913,38.184)
O4': (-38.483,-69.825,38.221)
C5': (-37.917,-67.540,38.707)
P: (-39.993,-66.054,39.121)
C4': (-37.551,-68.771,37.931)
C2': (-37.800,-70.079,35.978)
O2': (-36.580,-70.810,35.963)
N1: (-40.071,-70.673,36.781)
O4: (-43.888,-70.876,36.097)
O2: (-39.710,-72.172,35.092)
C6: (-40.925,-69.953,37.560)
C5: (-42.220,-69.968,37.382)
O3': (-36.376,-68.090,35.940)
N3: (-41.834,-71.507,35.613)
OP1: (-39.200,-65.471,40.181)
OP2: (-40.846,-65.176,38.318)
C2: (-40.485,-71.515,35.778)
C1': (-38.653,-70.634,37.102)
C3': (-37.574,-68.643,36.429)
O5': (-39.066,-66.913,38.184)
O4': (-38.483,-69.825,38.221)
C5': (-37.917,-67.540,38.707)
P: (-39.993,-66.054,39.121)
C4': (-37.551,-68.771,37.931)
C2': (-37.800,-70.079,35.978)
O2': (-36.580,-70.810,35.963)
N1: (-40.071,-70.673,36.781)
O4: (-43.888,-70.876,36.097)
O2: (-39.710,-72.172,35.092)
C6: (-40.925,-69.953,37.560)
C5: (-42.220,-69.968,37.382)
O3': (-36.376,-68.090,35.940)
Image (generated by PyMOL):