Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0451:0453
Extra
PDB:
ATOM 1 O3' A A 450 48.920 147.670 49.929 1.00 63.72 O
ATOM 2 P A A 451 48.637 146.096 49.734 1.00 65.40 P
ATOM 3 OP1 A A 451 48.963 145.777 48.316 1.00 64.16 O
ATOM 4 OP2 A A 451 47.292 145.759 50.269 1.00 65.70 O
ATOM 5 O5' A A 451 49.719 145.398 50.673 1.00 60.88 O
ATOM 6 C5' A A 451 51.123 145.613 50.461 1.00 52.96 C
ATOM 7 C4' A A 451 51.870 144.315 50.607 1.00 49.06 C
ATOM 8 O4' A A 451 51.834 143.877 51.993 1.00 48.67 O
ATOM 9 C3' A A 451 51.330 143.145 49.795 1.00 46.42 C
ATOM 10 O3' A A 451 52.423 142.303 49.516 1.00 46.00 O
ATOM 11 C2' A A 451 50.480 142.407 50.815 1.00 45.87 C
ATOM 12 O2' A A 451 50.294 141.050 50.477 1.00 45.21 O
ATOM 13 C1' A A 451 51.371 142.546 52.047 1.00 45.80 C
ATOM 14 N9 A A 451 50.726 142.313 53.338 1.00 42.89 N
ATOM 15 C8 A A 451 49.841 143.117 54.007 1.00 43.21 C
ATOM 16 N7 A A 451 49.420 142.611 55.140 1.00 42.06 N
ATOM 17 C5 A A 451 50.074 141.393 55.220 1.00 39.68 C
ATOM 18 C6 A A 451 50.044 140.380 56.173 1.00 38.96 C
ATOM 19 N6 A A 451 49.281 140.420 57.264 1.00 39.56 N
ATOM 20 N1 A A 451 50.828 139.304 55.967 1.00 38.07 N
ATOM 21 C2 A A 451 51.578 139.261 54.862 1.00 36.80 C
ATOM 22 N3 A A 451 51.681 140.148 53.885 1.00 37.45 N
ATOM 23 C4 A A 451 50.893 141.204 54.126 1.00 39.52 C
ATOM 24 P G A 452 52.878 142.064 48.012 1.00 46.93 P
ATOM 25 OP1 G A 452 53.276 143.391 47.493 1.00 46.73 O
ATOM 26 OP2 G A 452 51.810 141.297 47.325 1.00 46.45 O
ATOM 27 O5' G A 452 54.166 141.138 48.184 1.00 43.23 O
TER
ATOM 1 O3' G B 452 56.355 143.614 51.551 1.00 41.61 O
ATOM 2 P U B 453 57.369 144.736 52.090 1.00 44.03 P
ATOM 3 OP1 U B 453 58.187 145.237 50.954 1.00 41.83 O
ATOM 4 OP2 U B 453 58.049 144.210 53.310 1.00 43.34 O
ATOM 5 O5' U B 453 56.382 145.888 52.559 1.00 39.82 O
ATOM 6 C5' U B 453 55.723 146.730 51.607 1.00 38.89 C
ATOM 7 C4' U B 453 54.533 147.378 52.252 1.00 39.42 C
ATOM 8 O4' U B 453 53.476 146.401 52.385 1.00 40.46 O
ATOM 9 C3' U B 453 54.810 147.855 53.663 1.00 41.09 C
ATOM 10 O3' U B 453 55.388 149.157 53.654 1.00 42.22 O
ATOM 11 C2' U B 453 53.438 147.773 54.316 1.00 40.60 C
ATOM 12 O2' U B 453 52.605 148.855 53.965 1.00 41.79 O
ATOM 13 C1' U B 453 52.873 146.510 53.662 1.00 39.59 C
ATOM 14 N1 U B 453 53.129 145.255 54.391 1.00 37.84 N
ATOM 15 C2 U B 453 52.420 145.011 55.555 1.00 36.64 C
ATOM 16 O2 U B 453 51.610 145.789 56.018 1.00 37.25 O
ATOM 17 N3 U B 453 52.704 143.817 56.164 1.00 36.44 N
ATOM 18 C4 U B 453 53.610 142.863 55.751 1.00 37.80 C
ATOM 19 O4 U B 453 53.811 141.870 56.456 1.00 36.32 O
ATOM 20 C5 U B 453 54.302 143.186 54.543 1.00 39.31 C
ATOM 21 C6 U B 453 54.048 144.340 53.921 1.00 38.59 C
ATOM 22 P A B 454 56.567 149.514 54.684 1.00 42.60 P
ATOM 23 OP1 A B 454 56.910 150.929 54.425 1.00 43.04 O
ATOM 24 OP2 A B 454 57.629 148.473 54.628 1.00 39.80 O
ATOM 25 O5' A B 454 55.854 149.452 56.102 1.00 39.72 O
TER
ATOM 2 P A A 451 48.637 146.096 49.734 1.00 65.40 P
ATOM 3 OP1 A A 451 48.963 145.777 48.316 1.00 64.16 O
ATOM 4 OP2 A A 451 47.292 145.759 50.269 1.00 65.70 O
ATOM 5 O5' A A 451 49.719 145.398 50.673 1.00 60.88 O
ATOM 6 C5' A A 451 51.123 145.613 50.461 1.00 52.96 C
ATOM 7 C4' A A 451 51.870 144.315 50.607 1.00 49.06 C
ATOM 8 O4' A A 451 51.834 143.877 51.993 1.00 48.67 O
ATOM 9 C3' A A 451 51.330 143.145 49.795 1.00 46.42 C
ATOM 10 O3' A A 451 52.423 142.303 49.516 1.00 46.00 O
ATOM 11 C2' A A 451 50.480 142.407 50.815 1.00 45.87 C
ATOM 12 O2' A A 451 50.294 141.050 50.477 1.00 45.21 O
ATOM 13 C1' A A 451 51.371 142.546 52.047 1.00 45.80 C
ATOM 14 N9 A A 451 50.726 142.313 53.338 1.00 42.89 N
ATOM 15 C8 A A 451 49.841 143.117 54.007 1.00 43.21 C
ATOM 16 N7 A A 451 49.420 142.611 55.140 1.00 42.06 N
ATOM 17 C5 A A 451 50.074 141.393 55.220 1.00 39.68 C
ATOM 18 C6 A A 451 50.044 140.380 56.173 1.00 38.96 C
ATOM 19 N6 A A 451 49.281 140.420 57.264 1.00 39.56 N
ATOM 20 N1 A A 451 50.828 139.304 55.967 1.00 38.07 N
ATOM 21 C2 A A 451 51.578 139.261 54.862 1.00 36.80 C
ATOM 22 N3 A A 451 51.681 140.148 53.885 1.00 37.45 N
ATOM 23 C4 A A 451 50.893 141.204 54.126 1.00 39.52 C
ATOM 24 P G A 452 52.878 142.064 48.012 1.00 46.93 P
ATOM 25 OP1 G A 452 53.276 143.391 47.493 1.00 46.73 O
ATOM 26 OP2 G A 452 51.810 141.297 47.325 1.00 46.45 O
ATOM 27 O5' G A 452 54.166 141.138 48.184 1.00 43.23 O
TER
ATOM 1 O3' G B 452 56.355 143.614 51.551 1.00 41.61 O
ATOM 2 P U B 453 57.369 144.736 52.090 1.00 44.03 P
ATOM 3 OP1 U B 453 58.187 145.237 50.954 1.00 41.83 O
ATOM 4 OP2 U B 453 58.049 144.210 53.310 1.00 43.34 O
ATOM 5 O5' U B 453 56.382 145.888 52.559 1.00 39.82 O
ATOM 6 C5' U B 453 55.723 146.730 51.607 1.00 38.89 C
ATOM 7 C4' U B 453 54.533 147.378 52.252 1.00 39.42 C
ATOM 8 O4' U B 453 53.476 146.401 52.385 1.00 40.46 O
ATOM 9 C3' U B 453 54.810 147.855 53.663 1.00 41.09 C
ATOM 10 O3' U B 453 55.388 149.157 53.654 1.00 42.22 O
ATOM 11 C2' U B 453 53.438 147.773 54.316 1.00 40.60 C
ATOM 12 O2' U B 453 52.605 148.855 53.965 1.00 41.79 O
ATOM 13 C1' U B 453 52.873 146.510 53.662 1.00 39.59 C
ATOM 14 N1 U B 453 53.129 145.255 54.391 1.00 37.84 N
ATOM 15 C2 U B 453 52.420 145.011 55.555 1.00 36.64 C
ATOM 16 O2 U B 453 51.610 145.789 56.018 1.00 37.25 O
ATOM 17 N3 U B 453 52.704 143.817 56.164 1.00 36.44 N
ATOM 18 C4 U B 453 53.610 142.863 55.751 1.00 37.80 C
ATOM 19 O4 U B 453 53.811 141.870 56.456 1.00 36.32 O
ATOM 20 C5 U B 453 54.302 143.186 54.543 1.00 39.31 C
ATOM 21 C6 U B 453 54.048 144.340 53.921 1.00 38.59 C
ATOM 22 P A B 454 56.567 149.514 54.684 1.00 42.60 P
ATOM 23 OP1 A B 454 56.910 150.929 54.425 1.00 43.04 O
ATOM 24 OP2 A B 454 57.629 148.473 54.628 1.00 39.80 O
ATOM 25 O5' A B 454 55.854 149.452 56.102 1.00 39.72 O
TER
Atoms:
OP1: (48.963,145.777,48.316)
OP2: (47.292,145.759,50.269)
C3': (51.330,143.145,49.795)
C1': (51.371,142.546,52.047)
C5': (51.123,145.613,50.461)
O4': (51.834,143.877,51.993)
C8: (49.841,143.117,54.007)
O2': (50.294,141.050,50.477)
C6: (50.044,140.380,56.173)
C5: (50.074,141.393,55.220)
C4: (50.893,141.204,54.126)
P: (48.637,146.096,49.734)
C4': (51.870,144.315,50.607)
C2': (50.480,142.407,50.815)
C2: (51.578,139.261,54.862)
N1: (50.828,139.304,55.967)
N3: (51.681,140.148,53.885)
N6: (49.281,140.420,57.264)
N7: (49.420,142.611,55.140)
N9: (50.726,142.313,53.338)
O5': (49.719,145.398,50.673)
O3': (52.423,142.303,49.516)
OP2: (47.292,145.759,50.269)
C3': (51.330,143.145,49.795)
C1': (51.371,142.546,52.047)
C5': (51.123,145.613,50.461)
O4': (51.834,143.877,51.993)
C8: (49.841,143.117,54.007)
O2': (50.294,141.050,50.477)
C6: (50.044,140.380,56.173)
C5: (50.074,141.393,55.220)
C4: (50.893,141.204,54.126)
P: (48.637,146.096,49.734)
C4': (51.870,144.315,50.607)
C2': (50.480,142.407,50.815)
C2: (51.578,139.261,54.862)
N1: (50.828,139.304,55.967)
N3: (51.681,140.148,53.885)
N6: (49.281,140.420,57.264)
N7: (49.420,142.611,55.140)
N9: (50.726,142.313,53.338)
O5': (49.719,145.398,50.673)
O3': (52.423,142.303,49.516)
C4: (53.610,142.863,55.751)
N3: (52.704,143.817,56.164)
OP1: (58.187,145.237,50.954)
OP2: (58.049,144.210,53.310)
C2: (52.420,145.011,55.555)
C1': (52.873,146.510,53.662)
C3': (54.810,147.855,53.663)
O5': (56.382,145.888,52.559)
O4': (53.476,146.401,52.385)
C5': (55.723,146.730,51.607)
P: (57.369,144.736,52.090)
C4': (54.533,147.378,52.252)
C2': (53.438,147.773,54.316)
O2': (52.605,148.855,53.965)
N1: (53.129,145.255,54.391)
O4: (53.811,141.870,56.456)
O2: (51.610,145.789,56.018)
C6: (54.048,144.340,53.921)
C5: (54.302,143.186,54.543)
O3': (55.388,149.157,53.654)
N3: (52.704,143.817,56.164)
OP1: (58.187,145.237,50.954)
OP2: (58.049,144.210,53.310)
C2: (52.420,145.011,55.555)
C1': (52.873,146.510,53.662)
C3': (54.810,147.855,53.663)
O5': (56.382,145.888,52.559)
O4': (53.476,146.401,52.385)
C5': (55.723,146.730,51.607)
P: (57.369,144.736,52.090)
C4': (54.533,147.378,52.252)
C2': (53.438,147.773,54.316)
O2': (52.605,148.855,53.965)
N1: (53.129,145.255,54.391)
O4: (53.811,141.870,56.456)
O2: (51.610,145.789,56.018)
C6: (54.048,144.340,53.921)
C5: (54.302,143.186,54.543)
O3': (55.388,149.157,53.654)
Image (generated by PyMOL):