Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A134:A133
Extra
PDB:
ATOM 1 O3' G A 133 -8.782 -38.569 68.930 1.00 43.90 O
ATOM 2 P U A 134 -7.390 -39.370 68.887 1.00 74.53 P
ATOM 3 OP1 U A 134 -6.716 -39.150 70.188 1.00 74.53 O
ATOM 4 OP2 U A 134 -6.691 -38.969 67.639 1.00 74.53 O
ATOM 5 O5' U A 134 -7.859 -40.876 68.778 1.00 74.53 O
ATOM 6 C5' U A 134 -7.812 -41.731 69.897 1.00 74.53 C
ATOM 7 C4' U A 134 -7.864 -43.163 69.465 1.00 74.53 C
ATOM 8 O4' U A 134 -8.791 -43.294 68.347 1.00 74.53 O
ATOM 9 C3' U A 134 -6.580 -43.739 68.891 1.00 74.53 C
ATOM 10 O3' U A 134 -5.596 -44.066 69.850 1.00 74.53 O
ATOM 11 C2' U A 134 -7.110 -44.927 68.109 1.00 74.53 C
ATOM 12 O2' U A 134 -7.591 -45.941 68.982 1.00 74.53 O
ATOM 13 C1' U A 134 -8.299 -44.271 67.437 1.00 74.53 C
ATOM 14 N1 U A 134 -7.880 -43.595 66.198 1.00 73.49 N
ATOM 15 C2 U A 134 -7.675 -44.415 65.102 1.00 73.49 C
ATOM 16 O2 U A 134 -7.875 -45.626 65.126 1.00 73.49 O
ATOM 17 N3 U A 134 -7.252 -43.748 63.978 1.00 73.49 N
ATOM 18 C4 U A 134 -7.005 -42.391 63.860 1.00 73.49 C
ATOM 19 O4 U A 134 -6.624 -41.933 62.781 1.00 73.49 O
ATOM 20 C5 U A 134 -7.217 -41.623 65.049 1.00 73.49 C
ATOM 21 C6 U A 134 -7.627 -42.243 66.157 1.00 73.49 C
ATOM 22 P G A 135 -4.056 -44.067 69.409 1.00 82.78 P
ATOM 23 OP1 G A 135 -3.267 -44.494 70.582 1.00 82.78 O
ATOM 24 OP2 G A 135 -3.782 -42.746 68.801 1.00 82.78 O
ATOM 25 O5' G A 135 -4.005 -45.192 68.285 1.00 82.78 O
TER
ATOM 1 O3' U B 132 -11.555 -34.500 65.241 1.00 24.55 O
ATOM 2 P G B 133 -10.108 -35.139 65.516 1.00 43.90 P
ATOM 3 OP1 G B 133 -9.420 -34.254 66.482 1.00 43.90 O
ATOM 4 OP2 G B 133 -9.476 -35.380 64.194 1.00 43.90 O
ATOM 5 O5' G B 133 -10.457 -36.526 66.209 1.00 43.90 O
ATOM 6 C5' G B 133 -10.903 -36.558 67.548 1.00 43.90 C
ATOM 7 C4' G B 133 -11.014 -37.964 68.058 1.00 43.90 C
ATOM 8 O4' G B 133 -11.997 -38.690 67.273 1.00 43.90 O
ATOM 9 C3' G B 133 -9.767 -38.828 67.943 1.00 43.90 C
ATOM 10 O3' G B 133 -8.782 -38.569 68.930 1.00 43.90 O
ATOM 11 C2' G B 133 -10.362 -40.227 68.008 1.00 43.90 C
ATOM 12 O2' G B 133 -10.797 -40.551 69.326 1.00 43.90 O
ATOM 13 C1' G B 133 -11.580 -40.030 67.111 1.00 43.90 C
ATOM 14 N9 G B 133 -11.202 -40.224 65.706 1.00 43.72 N
ATOM 15 C8 G B 133 -10.819 -39.296 64.753 1.00 43.72 C
ATOM 16 N7 G B 133 -10.466 -39.855 63.621 1.00 43.72 N
ATOM 17 C5 G B 133 -10.596 -41.225 63.879 1.00 43.72 C
ATOM 18 C6 G B 133 -10.366 -42.362 63.071 1.00 43.72 C
ATOM 19 O6 G B 133 -9.982 -42.409 61.908 1.00 43.72 O
ATOM 20 N1 G B 133 -10.625 -43.552 63.739 1.00 43.72 N
ATOM 21 C2 G B 133 -11.051 -43.661 65.037 1.00 43.72 C
ATOM 22 N2 G B 133 -11.239 -44.910 65.503 1.00 43.72 N
ATOM 23 N3 G B 133 -11.273 -42.617 65.811 1.00 43.72 N
ATOM 24 C4 G B 133 -11.029 -41.459 65.164 1.00 43.72 C
ATOM 25 P U B 134 -7.390 -39.370 68.887 1.00 74.53 P
ATOM 26 OP1 U B 134 -6.716 -39.150 70.188 1.00 74.53 O
ATOM 27 OP2 U B 134 -6.691 -38.969 67.639 1.00 74.53 O
ATOM 28 O5' U B 134 -7.859 -40.876 68.778 1.00 74.53 O
TER
ATOM 2 P U A 134 -7.390 -39.370 68.887 1.00 74.53 P
ATOM 3 OP1 U A 134 -6.716 -39.150 70.188 1.00 74.53 O
ATOM 4 OP2 U A 134 -6.691 -38.969 67.639 1.00 74.53 O
ATOM 5 O5' U A 134 -7.859 -40.876 68.778 1.00 74.53 O
ATOM 6 C5' U A 134 -7.812 -41.731 69.897 1.00 74.53 C
ATOM 7 C4' U A 134 -7.864 -43.163 69.465 1.00 74.53 C
ATOM 8 O4' U A 134 -8.791 -43.294 68.347 1.00 74.53 O
ATOM 9 C3' U A 134 -6.580 -43.739 68.891 1.00 74.53 C
ATOM 10 O3' U A 134 -5.596 -44.066 69.850 1.00 74.53 O
ATOM 11 C2' U A 134 -7.110 -44.927 68.109 1.00 74.53 C
ATOM 12 O2' U A 134 -7.591 -45.941 68.982 1.00 74.53 O
ATOM 13 C1' U A 134 -8.299 -44.271 67.437 1.00 74.53 C
ATOM 14 N1 U A 134 -7.880 -43.595 66.198 1.00 73.49 N
ATOM 15 C2 U A 134 -7.675 -44.415 65.102 1.00 73.49 C
ATOM 16 O2 U A 134 -7.875 -45.626 65.126 1.00 73.49 O
ATOM 17 N3 U A 134 -7.252 -43.748 63.978 1.00 73.49 N
ATOM 18 C4 U A 134 -7.005 -42.391 63.860 1.00 73.49 C
ATOM 19 O4 U A 134 -6.624 -41.933 62.781 1.00 73.49 O
ATOM 20 C5 U A 134 -7.217 -41.623 65.049 1.00 73.49 C
ATOM 21 C6 U A 134 -7.627 -42.243 66.157 1.00 73.49 C
ATOM 22 P G A 135 -4.056 -44.067 69.409 1.00 82.78 P
ATOM 23 OP1 G A 135 -3.267 -44.494 70.582 1.00 82.78 O
ATOM 24 OP2 G A 135 -3.782 -42.746 68.801 1.00 82.78 O
ATOM 25 O5' G A 135 -4.005 -45.192 68.285 1.00 82.78 O
TER
ATOM 1 O3' U B 132 -11.555 -34.500 65.241 1.00 24.55 O
ATOM 2 P G B 133 -10.108 -35.139 65.516 1.00 43.90 P
ATOM 3 OP1 G B 133 -9.420 -34.254 66.482 1.00 43.90 O
ATOM 4 OP2 G B 133 -9.476 -35.380 64.194 1.00 43.90 O
ATOM 5 O5' G B 133 -10.457 -36.526 66.209 1.00 43.90 O
ATOM 6 C5' G B 133 -10.903 -36.558 67.548 1.00 43.90 C
ATOM 7 C4' G B 133 -11.014 -37.964 68.058 1.00 43.90 C
ATOM 8 O4' G B 133 -11.997 -38.690 67.273 1.00 43.90 O
ATOM 9 C3' G B 133 -9.767 -38.828 67.943 1.00 43.90 C
ATOM 10 O3' G B 133 -8.782 -38.569 68.930 1.00 43.90 O
ATOM 11 C2' G B 133 -10.362 -40.227 68.008 1.00 43.90 C
ATOM 12 O2' G B 133 -10.797 -40.551 69.326 1.00 43.90 O
ATOM 13 C1' G B 133 -11.580 -40.030 67.111 1.00 43.90 C
ATOM 14 N9 G B 133 -11.202 -40.224 65.706 1.00 43.72 N
ATOM 15 C8 G B 133 -10.819 -39.296 64.753 1.00 43.72 C
ATOM 16 N7 G B 133 -10.466 -39.855 63.621 1.00 43.72 N
ATOM 17 C5 G B 133 -10.596 -41.225 63.879 1.00 43.72 C
ATOM 18 C6 G B 133 -10.366 -42.362 63.071 1.00 43.72 C
ATOM 19 O6 G B 133 -9.982 -42.409 61.908 1.00 43.72 O
ATOM 20 N1 G B 133 -10.625 -43.552 63.739 1.00 43.72 N
ATOM 21 C2 G B 133 -11.051 -43.661 65.037 1.00 43.72 C
ATOM 22 N2 G B 133 -11.239 -44.910 65.503 1.00 43.72 N
ATOM 23 N3 G B 133 -11.273 -42.617 65.811 1.00 43.72 N
ATOM 24 C4 G B 133 -11.029 -41.459 65.164 1.00 43.72 C
ATOM 25 P U B 134 -7.390 -39.370 68.887 1.00 74.53 P
ATOM 26 OP1 U B 134 -6.716 -39.150 70.188 1.00 74.53 O
ATOM 27 OP2 U B 134 -6.691 -38.969 67.639 1.00 74.53 O
ATOM 28 O5' U B 134 -7.859 -40.876 68.778 1.00 74.53 O
TER
Atoms:
C4: (-7.005,-42.391,63.860)
N3: (-7.252,-43.748,63.978)
OP1: (-6.716,-39.150,70.188)
OP2: (-6.691,-38.969,67.639)
C2: (-7.675,-44.415,65.102)
C1': (-8.299,-44.271,67.437)
C3': (-6.580,-43.739,68.891)
O5': (-7.859,-40.876,68.778)
O4': (-8.791,-43.294,68.347)
C5': (-7.812,-41.731,69.897)
P: (-7.390,-39.370,68.887)
C4': (-7.864,-43.163,69.465)
C2': (-7.110,-44.927,68.109)
O2': (-7.591,-45.941,68.982)
N1: (-7.880,-43.595,66.198)
O4: (-6.624,-41.933,62.781)
O2: (-7.875,-45.626,65.126)
C6: (-7.627,-42.243,66.157)
C5: (-7.217,-41.623,65.049)
O3': (-5.596,-44.066,69.850)
N3: (-7.252,-43.748,63.978)
OP1: (-6.716,-39.150,70.188)
OP2: (-6.691,-38.969,67.639)
C2: (-7.675,-44.415,65.102)
C1': (-8.299,-44.271,67.437)
C3': (-6.580,-43.739,68.891)
O5': (-7.859,-40.876,68.778)
O4': (-8.791,-43.294,68.347)
C5': (-7.812,-41.731,69.897)
P: (-7.390,-39.370,68.887)
C4': (-7.864,-43.163,69.465)
C2': (-7.110,-44.927,68.109)
O2': (-7.591,-45.941,68.982)
N1: (-7.880,-43.595,66.198)
O4: (-6.624,-41.933,62.781)
O2: (-7.875,-45.626,65.126)
C6: (-7.627,-42.243,66.157)
C5: (-7.217,-41.623,65.049)
O3': (-5.596,-44.066,69.850)
OP1: (-9.420,-34.254,66.482)
OP2: (-9.476,-35.380,64.194)
C3': (-9.767,-38.828,67.943)
C1': (-11.580,-40.030,67.111)
C5': (-10.903,-36.558,67.548)
O6: (-9.982,-42.409,61.908)
O4': (-11.997,-38.690,67.273)
C8: (-10.819,-39.296,64.753)
C2: (-11.051,-43.661,65.037)
C6: (-10.366,-42.362,63.071)
C5: (-10.596,-41.225,63.879)
C4: (-11.029,-41.459,65.164)
P: (-10.108,-35.139,65.516)
C4': (-11.014,-37.964,68.058)
C2': (-10.362,-40.227,68.008)
O2': (-10.797,-40.551,69.326)
N1: (-10.625,-43.552,63.739)
N2: (-11.239,-44.910,65.503)
N3: (-11.273,-42.617,65.811)
N7: (-10.466,-39.855,63.621)
N9: (-11.202,-40.224,65.706)
O5': (-10.457,-36.526,66.209)
O3': (-8.782,-38.569,68.930)
OP2: (-9.476,-35.380,64.194)
C3': (-9.767,-38.828,67.943)
C1': (-11.580,-40.030,67.111)
C5': (-10.903,-36.558,67.548)
O6: (-9.982,-42.409,61.908)
O4': (-11.997,-38.690,67.273)
C8: (-10.819,-39.296,64.753)
C2: (-11.051,-43.661,65.037)
C6: (-10.366,-42.362,63.071)
C5: (-10.596,-41.225,63.879)
C4: (-11.029,-41.459,65.164)
P: (-10.108,-35.139,65.516)
C4': (-11.014,-37.964,68.058)
C2': (-10.362,-40.227,68.008)
O2': (-10.797,-40.551,69.326)
N1: (-10.625,-43.552,63.739)
N2: (-11.239,-44.910,65.503)
N3: (-11.273,-42.617,65.811)
N7: (-10.466,-39.855,63.621)
N9: (-11.202,-40.224,65.706)
O5': (-10.457,-36.526,66.209)
O3': (-8.782,-38.569,68.930)
Image (generated by PyMOL):