Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R130:R139
Extra
PDB:
ATOM 1 O3' C A 129 112.168 -15.637 -14.895 1.00 58.74 O
ATOM 2 P A A 130 113.498 -16.217 -15.573 1.00 60.85 P
ATOM 3 OP1 A A 130 114.312 -15.072 -16.048 1.00 59.11 O
ATOM 4 OP2 A A 130 113.106 -17.299 -16.508 1.00 57.34 O
ATOM 5 O5' A A 130 114.250 -16.892 -14.333 1.00 64.26 O
ATOM 6 C5' A A 130 114.863 -16.086 -13.334 1.00 69.21 C
ATOM 7 C4' A A 130 115.535 -16.937 -12.271 1.00 72.86 C
ATOM 8 O4' A A 130 114.559 -17.728 -11.543 1.00 75.02 O
ATOM 9 C3' A A 130 116.514 -17.981 -12.788 1.00 75.71 C
ATOM 10 O3' A A 130 117.756 -17.399 -13.182 1.00 78.97 O
ATOM 11 C2' A A 130 116.606 -18.877 -11.559 1.00 76.11 C
ATOM 12 O2' A A 130 117.334 -18.323 -10.480 1.00 76.02 O
ATOM 13 C1' A A 130 115.126 -18.988 -11.216 1.00 76.91 C
ATOM 14 N9 A A 130 114.464 -20.061 -11.962 1.00 77.96 N
ATOM 15 C8 A A 130 113.791 -19.974 -13.152 1.00 77.90 C
ATOM 16 N7 A A 130 113.313 -21.120 -13.573 1.00 78.26 N
ATOM 17 C5 A A 130 113.694 -22.020 -12.595 1.00 78.25 C
ATOM 18 C6 A A 130 113.494 -23.410 -12.447 1.00 77.81 C
ATOM 19 N6 A A 130 112.826 -24.159 -13.330 1.00 77.97 N
ATOM 20 N1 A A 130 114.010 -24.003 -11.350 1.00 77.84 N
ATOM 21 C2 A A 130 114.685 -23.256 -10.464 1.00 77.75 C
ATOM 22 N3 A A 130 114.935 -21.947 -10.495 1.00 78.17 N
ATOM 23 C4 A A 130 114.408 -21.384 -11.596 1.00 78.18 C
ATOM 24 P G A 131 118.688 -18.111 -14.272 1.00 80.83 P
ATOM 25 OP1 G A 131 119.811 -17.191 -14.547 1.00 81.61 O
ATOM 26 OP2 G A 131 117.838 -18.578 -15.388 1.00 80.83 O
ATOM 27 O5' G A 131 119.239 -19.404 -13.500 1.00 86.86 O
TER
ATOM 1 O3' U B 138 115.149 -29.344 -4.285 1.00107.14 O
ATOM 2 P G B 139 113.836 -28.721 -3.612 1.00103.88 P
ATOM 3 OP1 G B 139 113.871 -29.048 -2.168 1.00103.92 O
ATOM 4 OP2 G B 139 112.660 -29.093 -4.429 1.00103.47 O
ATOM 5 O5' G B 139 114.075 -27.151 -3.783 1.00101.99 O
ATOM 6 C5' G B 139 115.146 -26.517 -3.096 1.00 99.18 C
ATOM 7 C4' G B 139 115.287 -25.066 -3.515 1.00 96.97 C
ATOM 8 O4' G B 139 115.650 -24.978 -4.918 1.00 95.69 O
ATOM 9 C3' G B 139 114.021 -24.225 -3.416 1.00 95.45 C
ATOM 10 O3' G B 139 113.753 -23.840 -2.066 1.00 93.50 O
ATOM 11 C2' G B 139 114.399 -23.064 -4.329 1.00 94.97 C
ATOM 12 O2' G B 139 115.311 -22.151 -3.750 1.00 94.41 O
ATOM 13 C1' G B 139 115.029 -23.836 -5.488 1.00 95.15 C
ATOM 14 N9 G B 139 114.054 -24.256 -6.496 1.00 95.23 N
ATOM 15 C8 G B 139 113.662 -25.537 -6.819 1.00 95.30 C
ATOM 16 N7 G B 139 112.769 -25.581 -7.770 1.00 95.34 N
ATOM 17 C5 G B 139 112.543 -24.251 -8.091 1.00 95.50 C
ATOM 18 C6 G B 139 111.675 -23.676 -9.053 1.00 95.29 C
ATOM 19 O6 G B 139 110.903 -24.256 -9.829 1.00 94.99 O
ATOM 20 N1 G B 139 111.743 -22.281 -9.059 1.00 95.34 N
ATOM 21 C2 G B 139 112.573 -21.542 -8.242 1.00 95.19 C
ATOM 22 N2 G B 139 112.516 -20.210 -8.386 1.00 95.05 N
ATOM 23 N3 G B 139 113.391 -22.067 -7.337 1.00 95.32 N
ATOM 24 C4 G B 139 113.327 -23.424 -7.317 1.00 95.60 C
ATOM 25 P U B 140 112.382 -24.215 -1.318 1.00 92.93 P
ATOM 26 OP1 U B 140 112.715 -24.516 0.091 1.00 93.51 O
ATOM 27 OP2 U B 140 111.644 -25.216 -2.120 1.00 92.24 O
ATOM 28 O5' U B 140 111.557 -22.842 -1.358 1.00 92.11 O
TER
ATOM 2 P A A 130 113.498 -16.217 -15.573 1.00 60.85 P
ATOM 3 OP1 A A 130 114.312 -15.072 -16.048 1.00 59.11 O
ATOM 4 OP2 A A 130 113.106 -17.299 -16.508 1.00 57.34 O
ATOM 5 O5' A A 130 114.250 -16.892 -14.333 1.00 64.26 O
ATOM 6 C5' A A 130 114.863 -16.086 -13.334 1.00 69.21 C
ATOM 7 C4' A A 130 115.535 -16.937 -12.271 1.00 72.86 C
ATOM 8 O4' A A 130 114.559 -17.728 -11.543 1.00 75.02 O
ATOM 9 C3' A A 130 116.514 -17.981 -12.788 1.00 75.71 C
ATOM 10 O3' A A 130 117.756 -17.399 -13.182 1.00 78.97 O
ATOM 11 C2' A A 130 116.606 -18.877 -11.559 1.00 76.11 C
ATOM 12 O2' A A 130 117.334 -18.323 -10.480 1.00 76.02 O
ATOM 13 C1' A A 130 115.126 -18.988 -11.216 1.00 76.91 C
ATOM 14 N9 A A 130 114.464 -20.061 -11.962 1.00 77.96 N
ATOM 15 C8 A A 130 113.791 -19.974 -13.152 1.00 77.90 C
ATOM 16 N7 A A 130 113.313 -21.120 -13.573 1.00 78.26 N
ATOM 17 C5 A A 130 113.694 -22.020 -12.595 1.00 78.25 C
ATOM 18 C6 A A 130 113.494 -23.410 -12.447 1.00 77.81 C
ATOM 19 N6 A A 130 112.826 -24.159 -13.330 1.00 77.97 N
ATOM 20 N1 A A 130 114.010 -24.003 -11.350 1.00 77.84 N
ATOM 21 C2 A A 130 114.685 -23.256 -10.464 1.00 77.75 C
ATOM 22 N3 A A 130 114.935 -21.947 -10.495 1.00 78.17 N
ATOM 23 C4 A A 130 114.408 -21.384 -11.596 1.00 78.18 C
ATOM 24 P G A 131 118.688 -18.111 -14.272 1.00 80.83 P
ATOM 25 OP1 G A 131 119.811 -17.191 -14.547 1.00 81.61 O
ATOM 26 OP2 G A 131 117.838 -18.578 -15.388 1.00 80.83 O
ATOM 27 O5' G A 131 119.239 -19.404 -13.500 1.00 86.86 O
TER
ATOM 1 O3' U B 138 115.149 -29.344 -4.285 1.00107.14 O
ATOM 2 P G B 139 113.836 -28.721 -3.612 1.00103.88 P
ATOM 3 OP1 G B 139 113.871 -29.048 -2.168 1.00103.92 O
ATOM 4 OP2 G B 139 112.660 -29.093 -4.429 1.00103.47 O
ATOM 5 O5' G B 139 114.075 -27.151 -3.783 1.00101.99 O
ATOM 6 C5' G B 139 115.146 -26.517 -3.096 1.00 99.18 C
ATOM 7 C4' G B 139 115.287 -25.066 -3.515 1.00 96.97 C
ATOM 8 O4' G B 139 115.650 -24.978 -4.918 1.00 95.69 O
ATOM 9 C3' G B 139 114.021 -24.225 -3.416 1.00 95.45 C
ATOM 10 O3' G B 139 113.753 -23.840 -2.066 1.00 93.50 O
ATOM 11 C2' G B 139 114.399 -23.064 -4.329 1.00 94.97 C
ATOM 12 O2' G B 139 115.311 -22.151 -3.750 1.00 94.41 O
ATOM 13 C1' G B 139 115.029 -23.836 -5.488 1.00 95.15 C
ATOM 14 N9 G B 139 114.054 -24.256 -6.496 1.00 95.23 N
ATOM 15 C8 G B 139 113.662 -25.537 -6.819 1.00 95.30 C
ATOM 16 N7 G B 139 112.769 -25.581 -7.770 1.00 95.34 N
ATOM 17 C5 G B 139 112.543 -24.251 -8.091 1.00 95.50 C
ATOM 18 C6 G B 139 111.675 -23.676 -9.053 1.00 95.29 C
ATOM 19 O6 G B 139 110.903 -24.256 -9.829 1.00 94.99 O
ATOM 20 N1 G B 139 111.743 -22.281 -9.059 1.00 95.34 N
ATOM 21 C2 G B 139 112.573 -21.542 -8.242 1.00 95.19 C
ATOM 22 N2 G B 139 112.516 -20.210 -8.386 1.00 95.05 N
ATOM 23 N3 G B 139 113.391 -22.067 -7.337 1.00 95.32 N
ATOM 24 C4 G B 139 113.327 -23.424 -7.317 1.00 95.60 C
ATOM 25 P U B 140 112.382 -24.215 -1.318 1.00 92.93 P
ATOM 26 OP1 U B 140 112.715 -24.516 0.091 1.00 93.51 O
ATOM 27 OP2 U B 140 111.644 -25.216 -2.120 1.00 92.24 O
ATOM 28 O5' U B 140 111.557 -22.842 -1.358 1.00 92.11 O
TER
Atoms:
OP1: (114.312,-15.072,-16.048)
OP2: (113.106,-17.299,-16.508)
C3': (116.514,-17.981,-12.788)
C1': (115.126,-18.988,-11.216)
C5': (114.863,-16.086,-13.334)
O4': (114.559,-17.728,-11.543)
C8: (113.791,-19.974,-13.152)
O2': (117.334,-18.323,-10.480)
C6: (113.494,-23.410,-12.447)
C5: (113.694,-22.020,-12.595)
C4: (114.408,-21.384,-11.596)
P: (113.498,-16.217,-15.573)
C4': (115.535,-16.937,-12.271)
C2': (116.606,-18.877,-11.559)
C2: (114.685,-23.256,-10.464)
N1: (114.010,-24.003,-11.350)
N3: (114.935,-21.947,-10.495)
N6: (112.826,-24.159,-13.330)
N7: (113.313,-21.120,-13.573)
N9: (114.464,-20.061,-11.962)
O5': (114.250,-16.892,-14.333)
O3': (117.756,-17.399,-13.182)
OP2: (113.106,-17.299,-16.508)
C3': (116.514,-17.981,-12.788)
C1': (115.126,-18.988,-11.216)
C5': (114.863,-16.086,-13.334)
O4': (114.559,-17.728,-11.543)
C8: (113.791,-19.974,-13.152)
O2': (117.334,-18.323,-10.480)
C6: (113.494,-23.410,-12.447)
C5: (113.694,-22.020,-12.595)
C4: (114.408,-21.384,-11.596)
P: (113.498,-16.217,-15.573)
C4': (115.535,-16.937,-12.271)
C2': (116.606,-18.877,-11.559)
C2: (114.685,-23.256,-10.464)
N1: (114.010,-24.003,-11.350)
N3: (114.935,-21.947,-10.495)
N6: (112.826,-24.159,-13.330)
N7: (113.313,-21.120,-13.573)
N9: (114.464,-20.061,-11.962)
O5': (114.250,-16.892,-14.333)
O3': (117.756,-17.399,-13.182)
OP1: (113.871,-29.048,-2.168)
OP2: (112.660,-29.093,-4.429)
C3': (114.021,-24.225,-3.416)
C1': (115.029,-23.836,-5.488)
C5': (115.146,-26.517,-3.096)
O6: (110.903,-24.256,-9.829)
O4': (115.650,-24.978,-4.918)
C8: (113.662,-25.537,-6.819)
C2: (112.573,-21.542,-8.242)
C6: (111.675,-23.676,-9.053)
C5: (112.543,-24.251,-8.091)
C4: (113.327,-23.424,-7.317)
P: (113.836,-28.721,-3.612)
C4': (115.287,-25.066,-3.515)
C2': (114.399,-23.064,-4.329)
O2': (115.311,-22.151,-3.750)
N1: (111.743,-22.281,-9.059)
N2: (112.516,-20.210,-8.386)
N3: (113.391,-22.067,-7.337)
N7: (112.769,-25.581,-7.770)
N9: (114.054,-24.256,-6.496)
O5': (114.075,-27.151,-3.783)
O3': (113.753,-23.840,-2.066)
OP2: (112.660,-29.093,-4.429)
C3': (114.021,-24.225,-3.416)
C1': (115.029,-23.836,-5.488)
C5': (115.146,-26.517,-3.096)
O6: (110.903,-24.256,-9.829)
O4': (115.650,-24.978,-4.918)
C8: (113.662,-25.537,-6.819)
C2: (112.573,-21.542,-8.242)
C6: (111.675,-23.676,-9.053)
C5: (112.543,-24.251,-8.091)
C4: (113.327,-23.424,-7.317)
P: (113.836,-28.721,-3.612)
C4': (115.287,-25.066,-3.515)
C2': (114.399,-23.064,-4.329)
O2': (115.311,-22.151,-3.750)
N1: (111.743,-22.281,-9.059)
N2: (112.516,-20.210,-8.386)
N3: (113.391,-22.067,-7.337)
N7: (112.769,-25.581,-7.770)
N9: (114.054,-24.256,-6.496)
O5': (114.075,-27.151,-3.783)
O3': (113.753,-23.840,-2.066)
Image (generated by PyMOL):