ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q96:B16:B12

Extra

PDB:
ATOM 1 O3' A A 15 3.406 28.002 73.409 1.00 31.56 O
ATOM 2 P A A 16 3.098 27.924 71.836 1.00 32.85 P
ATOM 3 OP1 A A 16 3.376 29.267 71.264 1.00 33.91 O
ATOM 4 OP2 A A 16 1.757 27.305 71.652 1.00 27.95 O
ATOM 5 O5' A A 16 4.214 26.935 71.279 1.00 25.29 O
ATOM 6 C5' A A 16 3.858 25.784 70.534 1.00 27.06 C
ATOM 7 C4' A A 16 4.600 24.585 71.060 1.00 24.43 C
ATOM 8 O4' A A 16 3.888 24.038 72.203 1.00 25.88 O
ATOM 9 C3' A A 16 4.708 23.439 70.074 1.00 24.16 C
ATOM 10 O3' A A 16 5.842 23.624 69.237 1.00 27.58 O
ATOM 11 C2' A A 16 4.828 22.236 70.999 1.00 23.30 C
ATOM 12 O2' A A 16 6.133 22.059 71.520 1.00 24.64 O
ATOM 13 C1' A A 16 3.848 22.624 72.109 1.00 21.05 C
ATOM 14 N9 A A 16 2.463 22.215 71.851 1.00 19.31 N
ATOM 15 C8 A A 16 1.373 23.012 71.582 1.00 22.08 C
ATOM 16 N7 A A 16 0.260 22.340 71.392 1.00 19.80 N
ATOM 17 C5 A A 16 0.641 21.013 71.546 1.00 21.22 C
ATOM 18 C6 A A 16 -0.079 19.803 71.468 1.00 21.55 C
ATOM 19 N6 A A 16 -1.388 19.730 71.206 1.00 19.08 N
ATOM 20 N1 A A 16 0.603 18.653 71.673 1.00 18.53 N
ATOM 21 C2 A A 16 1.914 18.723 71.938 1.00 22.53 C
ATOM 22 N3 A A 16 2.699 19.796 72.039 1.00 22.26 N
ATOM 23 C4 A A 16 1.994 20.922 71.830 1.00 20.64 C
ATOM 24 P G A 17 5.693 23.428 67.650 1.00 29.11 P
ATOM 25 OP1 G A 17 7.057 23.481 67.060 1.00 39.13 O
ATOM 26 OP2 G A 17 4.645 24.361 67.163 1.00 37.64 O
ATOM 27 O5' G A 17 5.154 21.936 67.508 1.00 24.19 O
TER

ATOM 1 O3' U B 11 0.400 11.067 75.451 1.00 20.66 O
ATOM 2 P G B 12 -0.297 11.632 76.785 1.00 23.08 P
ATOM 3 OP1 G B 12 0.175 10.786 77.906 1.00 28.07 O
ATOM 4 OP2 G B 12 -1.758 11.786 76.548 1.00 27.44 O
ATOM 5 O5' G B 12 0.320 13.093 76.961 1.00 21.68 O
ATOM 6 C5' G B 12 1.707 13.274 77.248 1.00 19.83 C
ATOM 7 C4' G B 12 2.044 14.749 77.321 1.00 18.57 C
ATOM 8 O4' G B 12 1.952 15.345 75.995 1.00 19.70 O
ATOM 9 C3' G B 12 1.118 15.621 78.156 1.00 23.52 C
ATOM 10 O3' G B 12 1.362 15.507 79.554 1.00 28.10 O
ATOM 11 C2' G B 12 1.436 17.005 77.608 1.00 24.87 C
ATOM 12 O2' G B 12 2.651 17.548 78.080 1.00 27.64 O
ATOM 13 C1' G B 12 1.539 16.702 76.110 1.00 23.90 C
ATOM 14 N9 G B 12 0.240 16.870 75.461 1.00 23.71 N
ATOM 15 C8 G B 12 -0.701 15.904 75.178 1.00 24.57 C
ATOM 16 N7 G B 12 -1.802 16.395 74.673 1.00 19.63 N
ATOM 17 C5 G B 12 -1.567 17.762 74.600 1.00 20.70 C
ATOM 18 C6 G B 12 -2.399 18.818 74.143 1.00 25.75 C
ATOM 19 O6 G B 12 -3.552 18.755 73.698 1.00 29.14 O
ATOM 20 N1 G B 12 -1.762 20.052 74.245 1.00 27.71 N
ATOM 21 C2 G B 12 -0.488 20.247 74.720 1.00 28.53 C
ATOM 22 N2 G B 12 -0.041 21.515 74.733 1.00 29.10 N
ATOM 23 N3 G B 12 0.295 19.273 75.148 1.00 21.39 N
ATOM 24 C4 G B 12 -0.305 18.067 75.063 1.00 21.91 C
ATOM 25 P A B 13 0.117 15.374 80.569 1.00 30.94 P
ATOM 26 OP1 A B 13 0.656 15.400 81.952 1.00 31.01 O
ATOM 27 OP2 A B 13 -0.725 14.229 80.136 1.00 30.84 O
ATOM 28 O5' A B 13 -0.704 16.719 80.336 1.00 25.58 O
TER

Atoms:
OP1: (3.376,29.267,71.264)
OP2: (1.757,27.305,71.652)
C3': (4.708,23.439,70.074)
C1': (3.848,22.624,72.109)
C5': (3.858,25.784,70.534)
O4': (3.888,24.038,72.203)
C8: (1.373,23.012,71.582)
O2': (6.133,22.059,71.520)
C6: (-0.079,19.803,71.468)
C5: (0.641,21.013,71.546)
C4: (1.994,20.922,71.830)
P: (3.098,27.924,71.836)
C4': (4.600,24.585,71.060)
C2': (4.828,22.236,70.999)
C2: (1.914,18.723,71.938)
N1: (0.603,18.653,71.673)
N3: (2.699,19.796,72.039)
N6: (-1.388,19.730,71.206)
N7: (0.260,22.340,71.392)
N9: (2.463,22.215,71.851)
O5': (4.214,26.935,71.279)
O3': (5.842,23.624,69.237)
OP1: (0.175,10.786,77.906)
OP2: (-1.758,11.786,76.548)
C3': (1.118,15.621,78.156)
C1': (1.539,16.702,76.110)
C5': (1.707,13.274,77.248)
O6: (-3.552,18.755,73.698)
O4': (1.952,15.345,75.995)
C8: (-0.701,15.904,75.178)
C2: (-0.488,20.247,74.720)
C6: (-2.399,18.818,74.143)
C5: (-1.567,17.762,74.600)
C4: (-0.305,18.067,75.063)
P: (-0.297,11.632,76.785)
C4': (2.044,14.749,77.321)
C2': (1.436,17.005,77.608)
O2': (2.651,17.548,78.080)
N1: (-1.762,20.052,74.245)
N2: (-0.041,21.515,74.733)
N3: (0.295,19.273,75.148)
N7: (-1.802,16.395,74.673)
N9: (0.240,16.870,75.461)
O5': (0.320,13.093,76.961)
O3': (1.362,15.507,79.554)
Image (generated by PyMOL):
PyMOL image
show in jmol