ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2BH2:D19:D18

Extra

PDB:
ATOM 1 O3' G A 18 20.930 -18.660 44.510 1.00 64.37 O
ATOM 2 P U A 19 19.464 -19.304 44.575 1.00 66.21 P
ATOM 3 OP1 U A 19 18.542 -18.285 45.135 1.00 64.46 O
ATOM 4 OP2 U A 19 19.523 -20.623 45.250 1.00 68.72 O
ATOM 5 O5' U A 19 19.135 -19.615 43.048 1.00 64.76 O
ATOM 6 C5' U A 19 19.674 -18.948 41.932 1.00 61.90 C
ATOM 7 C4' U A 19 19.647 -19.813 40.677 1.00 59.58 C
ATOM 8 O4' U A 19 20.888 -20.573 40.594 1.00 57.29 O
ATOM 9 C3' U A 19 18.520 -20.849 40.486 1.00 59.91 C
ATOM 10 O3' U A 19 17.299 -20.270 39.977 1.00 60.11 O
ATOM 11 C2' U A 19 19.208 -21.712 39.442 1.00 57.96 C
ATOM 12 O2' U A 19 19.186 -21.042 38.208 1.00 55.03 O
ATOM 13 C1' U A 19 20.658 -21.805 39.956 1.00 59.17 C
ATOM 14 N1 U A 19 20.937 -22.928 40.974 1.00 59.42 N
ATOM 15 C2 U A 19 21.423 -24.151 40.539 1.00 56.73 C
ATOM 16 O2 U A 19 21.654 -24.386 39.388 1.00 53.78 O
ATOM 17 N3 U A 19 21.655 -25.086 41.519 1.00 57.98 N
ATOM 18 C4 U A 19 21.417 -24.922 42.884 1.00 61.05 C
ATOM 19 O4 U A 19 21.625 -25.847 43.663 1.00 59.53 O
ATOM 20 C5 U A 19 20.902 -23.623 43.272 1.00 62.17 C
ATOM 21 C6 U A 19 20.692 -22.701 42.316 1.00 59.66 C
ATOM 22 P A A 20 15.823 -20.643 40.531 1.00 65.31 P
ATOM 23 OP1 A A 20 14.813 -19.753 39.903 1.00 66.28 O
ATOM 24 OP2 A A 20 15.743 -20.714 41.999 1.00 66.63 O
ATOM 25 O5' A A 20 15.668 -22.096 39.874 1.00 64.12 O
TER

ATOM 1 O3' G B 17 24.406 -21.834 48.971 1.00 68.99 O
ATOM 2 P G B 18 22.917 -21.775 48.381 1.00 67.88 P
ATOM 3 OP1 G B 18 22.213 -21.031 49.434 1.00 65.19 O
ATOM 4 OP2 G B 18 22.576 -23.144 47.889 1.00 66.76 O
ATOM 5 O5' G B 18 22.948 -20.903 47.026 1.00 66.78 O
ATOM 6 C5' G B 18 22.697 -19.503 47.009 1.00 65.58 C
ATOM 7 C4' G B 18 23.014 -19.049 45.608 1.00 63.23 C
ATOM 8 O4' G B 18 24.227 -19.706 45.208 1.00 60.92 O
ATOM 9 C3' G B 18 22.050 -19.508 44.535 1.00 63.30 C
ATOM 10 O3' G B 18 20.930 -18.660 44.510 1.00 64.37 O
ATOM 11 C2' G B 18 22.914 -19.412 43.288 1.00 60.10 C
ATOM 12 O2' G B 18 23.047 -18.094 42.807 1.00 58.55 O
ATOM 13 C1' G B 18 24.248 -19.944 43.805 1.00 59.28 C
ATOM 14 N9 G B 18 24.403 -21.371 43.535 1.00 57.86 N
ATOM 15 C8 G B 18 24.398 -22.406 44.453 1.00 57.43 C
ATOM 16 N7 G B 18 24.532 -23.576 43.906 1.00 55.11 N
ATOM 17 C5 G B 18 24.595 -23.312 42.571 1.00 56.74 C
ATOM 18 C6 G B 18 24.738 -24.214 41.514 1.00 57.54 C
ATOM 19 O6 G B 18 24.825 -25.436 41.617 1.00 59.22 O
ATOM 20 N1 G B 18 24.802 -23.587 40.271 1.00 55.98 N
ATOM 21 C2 G B 18 24.679 -22.218 40.115 1.00 55.17 C
ATOM 22 N2 G B 18 24.737 -21.761 38.845 1.00 50.93 N
ATOM 23 N3 G B 18 24.556 -21.352 41.121 1.00 53.55 N
ATOM 24 C4 G B 18 24.522 -21.966 42.310 1.00 54.95 C
ATOM 25 P U B 19 19.464 -19.304 44.575 1.00 66.21 P
ATOM 26 OP1 U B 19 18.542 -18.285 45.135 1.00 64.46 O
ATOM 27 OP2 U B 19 19.523 -20.623 45.250 1.00 68.72 O
ATOM 28 O5' U B 19 19.135 -19.615 43.048 1.00 64.76 O
TER

Atoms:
C4: (21.417,-24.922,42.884)
N3: (21.655,-25.086,41.519)
OP1: (18.542,-18.285,45.135)
OP2: (19.523,-20.623,45.250)
C2: (21.423,-24.151,40.539)
C1': (20.658,-21.805,39.956)
C3': (18.520,-20.849,40.486)
O5': (19.135,-19.615,43.048)
O4': (20.888,-20.573,40.594)
C5': (19.674,-18.948,41.932)
P: (19.464,-19.304,44.575)
C4': (19.647,-19.813,40.677)
C2': (19.208,-21.712,39.442)
O2': (19.186,-21.042,38.208)
N1: (20.937,-22.928,40.974)
O4: (21.625,-25.847,43.663)
O2: (21.654,-24.386,39.388)
C6: (20.692,-22.701,42.316)
C5: (20.902,-23.623,43.272)
O3': (17.299,-20.270,39.977)
OP1: (22.213,-21.031,49.434)
OP2: (22.576,-23.144,47.889)
C3': (22.050,-19.508,44.535)
C1': (24.248,-19.944,43.805)
C5': (22.697,-19.503,47.009)
O6: (24.825,-25.436,41.617)
O4': (24.227,-19.706,45.208)
C8: (24.398,-22.406,44.453)
C2: (24.679,-22.218,40.115)
C6: (24.738,-24.214,41.514)
C5: (24.595,-23.312,42.571)
C4: (24.522,-21.966,42.310)
P: (22.917,-21.775,48.381)
C4': (23.014,-19.049,45.608)
C2': (22.914,-19.412,43.288)
O2': (23.047,-18.094,42.807)
N1: (24.802,-23.587,40.271)
N2: (24.737,-21.761,38.845)
N3: (24.556,-21.352,41.121)
N7: (24.532,-23.576,43.906)
N9: (24.403,-21.371,43.535)
O5': (22.948,-20.903,47.026)
O3': (20.930,-18.660,44.510)
Image (generated by PyMOL):
PyMOL image
show in jmol