Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A647:A734
Extra
PDB:
ATOM 1 O3' C A 646 28.716 84.419 36.384 1.00 44.16 O
ATOM 2 P A A 647 28.170 82.951 36.754 1.00 44.71 P
ATOM 3 OP1 A A 647 27.651 82.370 35.504 1.00 46.09 O
ATOM 4 OP2 A A 647 27.282 83.006 37.949 1.00 43.71 O
ATOM 5 O5' A A 647 29.495 82.149 37.132 1.00 43.68 O
ATOM 6 C5' A A 647 30.580 82.018 36.197 1.00 42.64 C
ATOM 7 C4' A A 647 31.799 81.480 36.899 1.00 42.54 C
ATOM 8 O4' A A 647 32.030 82.309 38.058 1.00 42.92 O
ATOM 9 C3' A A 647 31.686 80.066 37.448 1.00 43.81 C
ATOM 10 O3' A A 647 32.078 79.122 36.442 1.00 45.97 O
ATOM 11 C2' A A 647 32.641 80.081 38.639 1.00 43.36 C
ATOM 12 O2' A A 647 33.987 79.887 38.278 1.00 44.82 O
ATOM 13 C1' A A 647 32.503 81.519 39.130 1.00 42.76 C
ATOM 14 N9 A A 647 31.630 81.736 40.280 1.00 41.69 N
ATOM 15 C8 A A 647 30.387 82.330 40.311 1.00 41.24 C
ATOM 16 N7 A A 647 29.883 82.444 41.513 1.00 40.33 N
ATOM 17 C5 A A 647 30.848 81.876 42.328 1.00 39.82 C
ATOM 18 C6 A A 647 30.917 81.706 43.718 1.00 39.24 C
ATOM 19 N6 A A 647 29.961 82.112 44.550 1.00 39.15 N
ATOM 20 N1 A A 647 32.015 81.104 44.226 1.00 39.41 N
ATOM 21 C2 A A 647 32.975 80.707 43.374 1.00 39.99 C
ATOM 22 N3 A A 647 33.025 80.815 42.043 1.00 39.67 N
ATOM 23 C4 A A 647 31.921 81.419 41.579 1.00 40.26 C
ATOM 24 P A A 648 31.547 77.599 36.494 1.00 47.25 P
ATOM 25 OP1 A A 648 31.440 77.194 35.058 1.00 47.39 O
ATOM 26 OP2 A A 648 30.359 77.470 37.382 1.00 45.47 O
ATOM 27 O5' A A 648 32.754 76.809 37.173 1.00 45.52 O
TER
ATOM 1 O3' A B 733 37.506 79.395 47.382 1.00 42.02 O
ATOM 2 P G B 734 38.537 80.103 48.405 1.00 39.01 P
ATOM 3 OP1 G B 734 39.408 79.094 49.035 1.00 35.96 O
ATOM 4 OP2 G B 734 37.757 81.023 49.244 1.00 37.43 O
ATOM 5 O5' G B 734 39.437 80.998 47.444 1.00 38.83 O
ATOM 6 C5' G B 734 40.340 80.383 46.510 1.00 40.64 C
ATOM 7 C4' G B 734 40.015 80.790 45.088 1.00 42.47 C
ATOM 8 O4' G B 734 38.643 80.456 44.744 1.00 42.98 O
ATOM 9 C3' G B 734 40.063 82.267 44.784 1.00 43.15 C
ATOM 10 O3' G B 734 41.395 82.728 44.708 1.00 43.07 O
ATOM 11 C2' G B 734 39.292 82.345 43.469 1.00 43.29 C
ATOM 12 O2' G B 734 39.981 81.884 42.316 1.00 44.14 O
ATOM 13 C1' G B 734 38.171 81.351 43.743 1.00 41.92 C
ATOM 14 N9 G B 734 36.983 82.017 44.249 1.00 39.90 N
ATOM 15 C8 G B 734 36.554 82.052 45.549 1.00 40.73 C
ATOM 16 N7 G B 734 35.426 82.690 45.697 1.00 39.87 N
ATOM 17 C5 G B 734 35.100 83.116 44.420 1.00 38.18 C
ATOM 18 C6 G B 734 33.980 83.848 43.966 1.00 37.77 C
ATOM 19 O6 G B 734 33.037 84.281 44.630 1.00 37.90 O
ATOM 20 N1 G B 734 34.022 84.061 42.592 1.00 37.00 N
ATOM 21 C2 G B 734 35.017 83.618 41.761 1.00 37.72 C
ATOM 22 N2 G B 734 34.859 83.888 40.452 1.00 37.46 N
ATOM 23 N3 G B 734 36.086 82.944 42.179 1.00 37.51 N
ATOM 24 C4 G B 734 36.055 82.723 43.514 1.00 38.67 C
ATOM 25 P C B 735 41.767 84.152 45.335 1.00 43.26 P
ATOM 26 OP1 C B 735 43.243 84.145 45.497 1.00 41.45 O
ATOM 27 OP2 C B 735 40.902 84.404 46.514 1.00 39.55 O
ATOM 28 O5' C B 735 41.310 85.180 44.208 1.00 41.45 O
TER
ATOM 2 P A A 647 28.170 82.951 36.754 1.00 44.71 P
ATOM 3 OP1 A A 647 27.651 82.370 35.504 1.00 46.09 O
ATOM 4 OP2 A A 647 27.282 83.006 37.949 1.00 43.71 O
ATOM 5 O5' A A 647 29.495 82.149 37.132 1.00 43.68 O
ATOM 6 C5' A A 647 30.580 82.018 36.197 1.00 42.64 C
ATOM 7 C4' A A 647 31.799 81.480 36.899 1.00 42.54 C
ATOM 8 O4' A A 647 32.030 82.309 38.058 1.00 42.92 O
ATOM 9 C3' A A 647 31.686 80.066 37.448 1.00 43.81 C
ATOM 10 O3' A A 647 32.078 79.122 36.442 1.00 45.97 O
ATOM 11 C2' A A 647 32.641 80.081 38.639 1.00 43.36 C
ATOM 12 O2' A A 647 33.987 79.887 38.278 1.00 44.82 O
ATOM 13 C1' A A 647 32.503 81.519 39.130 1.00 42.76 C
ATOM 14 N9 A A 647 31.630 81.736 40.280 1.00 41.69 N
ATOM 15 C8 A A 647 30.387 82.330 40.311 1.00 41.24 C
ATOM 16 N7 A A 647 29.883 82.444 41.513 1.00 40.33 N
ATOM 17 C5 A A 647 30.848 81.876 42.328 1.00 39.82 C
ATOM 18 C6 A A 647 30.917 81.706 43.718 1.00 39.24 C
ATOM 19 N6 A A 647 29.961 82.112 44.550 1.00 39.15 N
ATOM 20 N1 A A 647 32.015 81.104 44.226 1.00 39.41 N
ATOM 21 C2 A A 647 32.975 80.707 43.374 1.00 39.99 C
ATOM 22 N3 A A 647 33.025 80.815 42.043 1.00 39.67 N
ATOM 23 C4 A A 647 31.921 81.419 41.579 1.00 40.26 C
ATOM 24 P A A 648 31.547 77.599 36.494 1.00 47.25 P
ATOM 25 OP1 A A 648 31.440 77.194 35.058 1.00 47.39 O
ATOM 26 OP2 A A 648 30.359 77.470 37.382 1.00 45.47 O
ATOM 27 O5' A A 648 32.754 76.809 37.173 1.00 45.52 O
TER
ATOM 1 O3' A B 733 37.506 79.395 47.382 1.00 42.02 O
ATOM 2 P G B 734 38.537 80.103 48.405 1.00 39.01 P
ATOM 3 OP1 G B 734 39.408 79.094 49.035 1.00 35.96 O
ATOM 4 OP2 G B 734 37.757 81.023 49.244 1.00 37.43 O
ATOM 5 O5' G B 734 39.437 80.998 47.444 1.00 38.83 O
ATOM 6 C5' G B 734 40.340 80.383 46.510 1.00 40.64 C
ATOM 7 C4' G B 734 40.015 80.790 45.088 1.00 42.47 C
ATOM 8 O4' G B 734 38.643 80.456 44.744 1.00 42.98 O
ATOM 9 C3' G B 734 40.063 82.267 44.784 1.00 43.15 C
ATOM 10 O3' G B 734 41.395 82.728 44.708 1.00 43.07 O
ATOM 11 C2' G B 734 39.292 82.345 43.469 1.00 43.29 C
ATOM 12 O2' G B 734 39.981 81.884 42.316 1.00 44.14 O
ATOM 13 C1' G B 734 38.171 81.351 43.743 1.00 41.92 C
ATOM 14 N9 G B 734 36.983 82.017 44.249 1.00 39.90 N
ATOM 15 C8 G B 734 36.554 82.052 45.549 1.00 40.73 C
ATOM 16 N7 G B 734 35.426 82.690 45.697 1.00 39.87 N
ATOM 17 C5 G B 734 35.100 83.116 44.420 1.00 38.18 C
ATOM 18 C6 G B 734 33.980 83.848 43.966 1.00 37.77 C
ATOM 19 O6 G B 734 33.037 84.281 44.630 1.00 37.90 O
ATOM 20 N1 G B 734 34.022 84.061 42.592 1.00 37.00 N
ATOM 21 C2 G B 734 35.017 83.618 41.761 1.00 37.72 C
ATOM 22 N2 G B 734 34.859 83.888 40.452 1.00 37.46 N
ATOM 23 N3 G B 734 36.086 82.944 42.179 1.00 37.51 N
ATOM 24 C4 G B 734 36.055 82.723 43.514 1.00 38.67 C
ATOM 25 P C B 735 41.767 84.152 45.335 1.00 43.26 P
ATOM 26 OP1 C B 735 43.243 84.145 45.497 1.00 41.45 O
ATOM 27 OP2 C B 735 40.902 84.404 46.514 1.00 39.55 O
ATOM 28 O5' C B 735 41.310 85.180 44.208 1.00 41.45 O
TER
Atoms:
OP1: (27.651,82.370,35.504)
OP2: (27.282,83.006,37.949)
C3': (31.686,80.066,37.448)
C1': (32.503,81.519,39.130)
C5': (30.580,82.018,36.197)
O4': (32.030,82.309,38.058)
C8: (30.387,82.330,40.311)
O2': (33.987,79.887,38.278)
C6: (30.917,81.706,43.718)
C5: (30.848,81.876,42.328)
C4: (31.921,81.419,41.579)
P: (28.170,82.951,36.754)
C4': (31.799,81.480,36.899)
C2': (32.641,80.081,38.639)
C2: (32.975,80.707,43.374)
N1: (32.015,81.104,44.226)
N3: (33.025,80.815,42.043)
N6: (29.961,82.112,44.550)
N7: (29.883,82.444,41.513)
N9: (31.630,81.736,40.280)
O5': (29.495,82.149,37.132)
O3': (32.078,79.122,36.442)
OP2: (27.282,83.006,37.949)
C3': (31.686,80.066,37.448)
C1': (32.503,81.519,39.130)
C5': (30.580,82.018,36.197)
O4': (32.030,82.309,38.058)
C8: (30.387,82.330,40.311)
O2': (33.987,79.887,38.278)
C6: (30.917,81.706,43.718)
C5: (30.848,81.876,42.328)
C4: (31.921,81.419,41.579)
P: (28.170,82.951,36.754)
C4': (31.799,81.480,36.899)
C2': (32.641,80.081,38.639)
C2: (32.975,80.707,43.374)
N1: (32.015,81.104,44.226)
N3: (33.025,80.815,42.043)
N6: (29.961,82.112,44.550)
N7: (29.883,82.444,41.513)
N9: (31.630,81.736,40.280)
O5': (29.495,82.149,37.132)
O3': (32.078,79.122,36.442)
OP1: (39.408,79.094,49.035)
OP2: (37.757,81.023,49.244)
C3': (40.063,82.267,44.784)
C1': (38.171,81.351,43.743)
C5': (40.340,80.383,46.510)
O6: (33.037,84.281,44.630)
O4': (38.643,80.456,44.744)
C8: (36.554,82.052,45.549)
C2: (35.017,83.618,41.761)
C6: (33.980,83.848,43.966)
C5: (35.100,83.116,44.420)
C4: (36.055,82.723,43.514)
P: (38.537,80.103,48.405)
C4': (40.015,80.790,45.088)
C2': (39.292,82.345,43.469)
O2': (39.981,81.884,42.316)
N1: (34.022,84.061,42.592)
N2: (34.859,83.888,40.452)
N3: (36.086,82.944,42.179)
N7: (35.426,82.690,45.697)
N9: (36.983,82.017,44.249)
O5': (39.437,80.998,47.444)
O3': (41.395,82.728,44.708)
OP2: (37.757,81.023,49.244)
C3': (40.063,82.267,44.784)
C1': (38.171,81.351,43.743)
C5': (40.340,80.383,46.510)
O6: (33.037,84.281,44.630)
O4': (38.643,80.456,44.744)
C8: (36.554,82.052,45.549)
C2: (35.017,83.618,41.761)
C6: (33.980,83.848,43.966)
C5: (35.100,83.116,44.420)
C4: (36.055,82.723,43.514)
P: (38.537,80.103,48.405)
C4': (40.015,80.790,45.088)
C2': (39.292,82.345,43.469)
O2': (39.981,81.884,42.316)
N1: (34.022,84.061,42.592)
N2: (34.859,83.888,40.452)
N3: (36.086,82.944,42.179)
N7: (35.426,82.690,45.697)
N9: (36.983,82.017,44.249)
O5': (39.437,80.998,47.444)
O3': (41.395,82.728,44.708)
Image (generated by PyMOL):