Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01625:01479
Extra
PDB:
ATOM 1 O3' C A1624 105.794 192.151 39.261 1.00 87.24 O
ATOM 2 P A A1625 104.180 192.179 39.366 1.00 87.26 P
ATOM 3 OP1 A A1625 103.838 192.596 40.749 1.00 86.67 O
ATOM 4 OP2 A A1625 103.639 190.904 38.834 1.00 87.57 O
ATOM 5 O5' A A1625 103.730 193.345 38.371 1.00 86.19 O
ATOM 6 C5' A A1625 104.279 193.404 37.048 1.00 83.67 C
ATOM 7 C4' A A1625 103.444 194.254 36.124 1.00 82.29 C
ATOM 8 O4' A A1625 103.947 193.986 34.786 1.00 81.89 O
ATOM 9 C3' A A1625 101.951 193.937 36.079 1.00 81.94 C
ATOM 10 O3' A A1625 101.211 194.899 36.838 1.00 81.23 O
ATOM 11 C2' A A1625 101.618 193.993 34.590 1.00 82.25 C
ATOM 12 O2' A A1625 101.396 195.305 34.116 1.00 83.35 O
ATOM 13 C1' A A1625 102.913 193.462 33.979 1.00 82.25 C
ATOM 14 N9 A A1625 103.028 192.000 33.977 1.00 82.15 N
ATOM 15 C8 A A1625 103.592 191.192 34.938 1.00 82.51 C
ATOM 16 N7 A A1625 103.542 189.915 34.655 1.00 82.40 N
ATOM 17 C5 A A1625 102.902 189.873 33.425 1.00 82.01 C
ATOM 18 C6 A A1625 102.546 188.807 32.585 1.00 81.61 C
ATOM 19 N6 A A1625 102.784 187.527 32.873 1.00 81.13 N
ATOM 20 N1 A A1625 101.926 189.105 31.424 1.00 82.13 N
ATOM 21 C2 A A1625 101.684 190.391 31.137 1.00 81.81 C
ATOM 22 N3 A A1625 101.964 191.480 31.847 1.00 81.12 N
ATOM 23 C4 A A1625 102.582 191.149 32.993 1.00 81.67 C
ATOM 24 P U A1626 99.677 194.611 37.238 1.00 80.12 P
ATOM 25 OP1 U A1626 99.129 195.848 37.855 1.00 78.46 O
ATOM 26 OP2 U A1626 99.644 193.334 38.002 1.00 80.73 O
ATOM 27 O5' U A1626 98.935 194.392 35.844 1.00 79.09 O
TER
ATOM 1 O3' U B1478 101.318 188.282 22.724 1.00 94.05 O
ATOM 2 P G B1479 102.918 188.191 22.590 1.00 95.25 P
ATOM 3 OP1 G B1479 103.261 188.582 21.198 1.00 95.79 O
ATOM 4 OP2 G B1479 103.372 186.877 23.117 1.00 93.92 O
ATOM 5 O5' G B1479 103.451 189.322 23.575 1.00 95.05 O
ATOM 6 C5' G B1479 103.308 190.713 23.247 1.00 96.20 C
ATOM 7 C4' G B1479 103.961 191.561 24.307 1.00 97.80 C
ATOM 8 O4' G B1479 103.246 191.388 25.560 1.00 97.86 O
ATOM 9 C3' G B1479 105.394 191.183 24.652 1.00 99.30 C
ATOM 10 O3' G B1479 106.350 191.699 23.727 1.00101.50 O
ATOM 11 C2' G B1479 105.541 191.765 26.050 1.00 99.00 C
ATOM 12 O2' G B1479 105.750 193.164 26.042 1.00 98.93 O
ATOM 13 C1' G B1479 104.165 191.446 26.645 1.00 98.38 C
ATOM 14 N9 G B1479 104.152 190.160 27.344 1.00 97.53 N
ATOM 15 C8 G B1479 103.818 188.929 26.826 1.00 97.29 C
ATOM 16 N7 G B1479 103.940 187.957 27.691 1.00 96.86 N
ATOM 17 C5 G B1479 104.372 188.582 28.853 1.00 96.60 C
ATOM 18 C6 G B1479 104.684 188.041 30.135 1.00 96.43 C
ATOM 19 O6 G B1479 104.641 186.860 30.511 1.00 95.97 O
ATOM 20 N1 G B1479 105.084 189.033 31.022 1.00 96.11 N
ATOM 21 C2 G B1479 105.173 190.369 30.724 1.00 95.86 C
ATOM 22 N2 G B1479 105.573 191.168 31.717 1.00 95.98 N
ATOM 23 N3 G B1479 104.891 190.885 29.541 1.00 95.69 N
ATOM 24 C4 G B1479 104.501 189.943 28.659 1.00 96.57 C
ATOM 25 P C B1480 107.798 191.000 23.600 1.00102.60 P
ATOM 26 OP1 C B1480 108.503 191.665 22.475 1.00102.17 O
ATOM 27 OP2 C B1480 107.630 189.523 23.587 1.00101.86 O
ATOM 28 O5' C B1480 108.535 191.402 24.954 1.00103.02 O
TER
ATOM 2 P A A1625 104.180 192.179 39.366 1.00 87.26 P
ATOM 3 OP1 A A1625 103.838 192.596 40.749 1.00 86.67 O
ATOM 4 OP2 A A1625 103.639 190.904 38.834 1.00 87.57 O
ATOM 5 O5' A A1625 103.730 193.345 38.371 1.00 86.19 O
ATOM 6 C5' A A1625 104.279 193.404 37.048 1.00 83.67 C
ATOM 7 C4' A A1625 103.444 194.254 36.124 1.00 82.29 C
ATOM 8 O4' A A1625 103.947 193.986 34.786 1.00 81.89 O
ATOM 9 C3' A A1625 101.951 193.937 36.079 1.00 81.94 C
ATOM 10 O3' A A1625 101.211 194.899 36.838 1.00 81.23 O
ATOM 11 C2' A A1625 101.618 193.993 34.590 1.00 82.25 C
ATOM 12 O2' A A1625 101.396 195.305 34.116 1.00 83.35 O
ATOM 13 C1' A A1625 102.913 193.462 33.979 1.00 82.25 C
ATOM 14 N9 A A1625 103.028 192.000 33.977 1.00 82.15 N
ATOM 15 C8 A A1625 103.592 191.192 34.938 1.00 82.51 C
ATOM 16 N7 A A1625 103.542 189.915 34.655 1.00 82.40 N
ATOM 17 C5 A A1625 102.902 189.873 33.425 1.00 82.01 C
ATOM 18 C6 A A1625 102.546 188.807 32.585 1.00 81.61 C
ATOM 19 N6 A A1625 102.784 187.527 32.873 1.00 81.13 N
ATOM 20 N1 A A1625 101.926 189.105 31.424 1.00 82.13 N
ATOM 21 C2 A A1625 101.684 190.391 31.137 1.00 81.81 C
ATOM 22 N3 A A1625 101.964 191.480 31.847 1.00 81.12 N
ATOM 23 C4 A A1625 102.582 191.149 32.993 1.00 81.67 C
ATOM 24 P U A1626 99.677 194.611 37.238 1.00 80.12 P
ATOM 25 OP1 U A1626 99.129 195.848 37.855 1.00 78.46 O
ATOM 26 OP2 U A1626 99.644 193.334 38.002 1.00 80.73 O
ATOM 27 O5' U A1626 98.935 194.392 35.844 1.00 79.09 O
TER
ATOM 1 O3' U B1478 101.318 188.282 22.724 1.00 94.05 O
ATOM 2 P G B1479 102.918 188.191 22.590 1.00 95.25 P
ATOM 3 OP1 G B1479 103.261 188.582 21.198 1.00 95.79 O
ATOM 4 OP2 G B1479 103.372 186.877 23.117 1.00 93.92 O
ATOM 5 O5' G B1479 103.451 189.322 23.575 1.00 95.05 O
ATOM 6 C5' G B1479 103.308 190.713 23.247 1.00 96.20 C
ATOM 7 C4' G B1479 103.961 191.561 24.307 1.00 97.80 C
ATOM 8 O4' G B1479 103.246 191.388 25.560 1.00 97.86 O
ATOM 9 C3' G B1479 105.394 191.183 24.652 1.00 99.30 C
ATOM 10 O3' G B1479 106.350 191.699 23.727 1.00101.50 O
ATOM 11 C2' G B1479 105.541 191.765 26.050 1.00 99.00 C
ATOM 12 O2' G B1479 105.750 193.164 26.042 1.00 98.93 O
ATOM 13 C1' G B1479 104.165 191.446 26.645 1.00 98.38 C
ATOM 14 N9 G B1479 104.152 190.160 27.344 1.00 97.53 N
ATOM 15 C8 G B1479 103.818 188.929 26.826 1.00 97.29 C
ATOM 16 N7 G B1479 103.940 187.957 27.691 1.00 96.86 N
ATOM 17 C5 G B1479 104.372 188.582 28.853 1.00 96.60 C
ATOM 18 C6 G B1479 104.684 188.041 30.135 1.00 96.43 C
ATOM 19 O6 G B1479 104.641 186.860 30.511 1.00 95.97 O
ATOM 20 N1 G B1479 105.084 189.033 31.022 1.00 96.11 N
ATOM 21 C2 G B1479 105.173 190.369 30.724 1.00 95.86 C
ATOM 22 N2 G B1479 105.573 191.168 31.717 1.00 95.98 N
ATOM 23 N3 G B1479 104.891 190.885 29.541 1.00 95.69 N
ATOM 24 C4 G B1479 104.501 189.943 28.659 1.00 96.57 C
ATOM 25 P C B1480 107.798 191.000 23.600 1.00102.60 P
ATOM 26 OP1 C B1480 108.503 191.665 22.475 1.00102.17 O
ATOM 27 OP2 C B1480 107.630 189.523 23.587 1.00101.86 O
ATOM 28 O5' C B1480 108.535 191.402 24.954 1.00103.02 O
TER
Atoms:
OP1: (103.838,192.596,40.749)
OP2: (103.639,190.904,38.834)
C3': (101.951,193.937,36.079)
C1': (102.913,193.462,33.979)
C5': (104.279,193.404,37.048)
O4': (103.947,193.986,34.786)
C8: (103.592,191.192,34.938)
O2': (101.396,195.305,34.116)
C6: (102.546,188.807,32.585)
C5: (102.902,189.873,33.425)
C4: (102.582,191.149,32.993)
P: (104.180,192.179,39.366)
C4': (103.444,194.254,36.124)
C2': (101.618,193.993,34.590)
C2: (101.684,190.391,31.137)
N1: (101.926,189.105,31.424)
N3: (101.964,191.480,31.847)
N6: (102.784,187.527,32.873)
N7: (103.542,189.915,34.655)
N9: (103.028,192.000,33.977)
O5': (103.730,193.345,38.371)
O3': (101.211,194.899,36.838)
OP2: (103.639,190.904,38.834)
C3': (101.951,193.937,36.079)
C1': (102.913,193.462,33.979)
C5': (104.279,193.404,37.048)
O4': (103.947,193.986,34.786)
C8: (103.592,191.192,34.938)
O2': (101.396,195.305,34.116)
C6: (102.546,188.807,32.585)
C5: (102.902,189.873,33.425)
C4: (102.582,191.149,32.993)
P: (104.180,192.179,39.366)
C4': (103.444,194.254,36.124)
C2': (101.618,193.993,34.590)
C2: (101.684,190.391,31.137)
N1: (101.926,189.105,31.424)
N3: (101.964,191.480,31.847)
N6: (102.784,187.527,32.873)
N7: (103.542,189.915,34.655)
N9: (103.028,192.000,33.977)
O5': (103.730,193.345,38.371)
O3': (101.211,194.899,36.838)
OP1: (103.261,188.582,21.198)
OP2: (103.372,186.877,23.117)
C3': (105.394,191.183,24.652)
C1': (104.165,191.446,26.645)
C5': (103.308,190.713,23.247)
O6: (104.641,186.860,30.511)
O4': (103.246,191.388,25.560)
C8: (103.818,188.929,26.826)
C2: (105.173,190.369,30.724)
C6: (104.684,188.041,30.135)
C5: (104.372,188.582,28.853)
C4: (104.501,189.943,28.659)
P: (102.918,188.191,22.590)
C4': (103.961,191.561,24.307)
C2': (105.541,191.765,26.050)
O2': (105.750,193.164,26.042)
N1: (105.084,189.033,31.022)
N2: (105.573,191.168,31.717)
N3: (104.891,190.885,29.541)
N7: (103.940,187.957,27.691)
N9: (104.152,190.160,27.344)
O5': (103.451,189.322,23.575)
O3': (106.350,191.699,23.727)
OP2: (103.372,186.877,23.117)
C3': (105.394,191.183,24.652)
C1': (104.165,191.446,26.645)
C5': (103.308,190.713,23.247)
O6: (104.641,186.860,30.511)
O4': (103.246,191.388,25.560)
C8: (103.818,188.929,26.826)
C2: (105.173,190.369,30.724)
C6: (104.684,188.041,30.135)
C5: (104.372,188.582,28.853)
C4: (104.501,189.943,28.659)
P: (102.918,188.191,22.590)
C4': (103.961,191.561,24.307)
C2': (105.541,191.765,26.050)
O2': (105.750,193.164,26.042)
N1: (105.084,189.033,31.022)
N2: (105.573,191.168,31.717)
N3: (104.891,190.885,29.541)
N7: (103.940,187.957,27.691)
N9: (104.152,190.160,27.344)
O5': (103.451,189.322,23.575)
O3': (106.350,191.699,23.727)
Image (generated by PyMOL):