ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BNN:C14:C16

Extra

PDB:
ATOM 1 O3' C A 13 -13.908 -12.776 -8.916 1.00 53.44 O
ATOM 2 P A A 14 -15.185 -13.663 -8.524 1.00 55.78 P
ATOM 3 OP1 A A 14 -16.380 -12.781 -8.501 1.00 58.24 O
ATOM 4 OP2 A A 14 -14.833 -14.455 -7.321 1.00 55.82 O
ATOM 5 O5' A A 14 -15.356 -14.673 -9.739 1.00 45.38 O
ATOM 6 C5' A A 14 -16.236 -15.782 -9.631 1.00 47.10 C
ATOM 7 C4' A A 14 -16.951 -16.010 -10.938 1.00 53.55 C
ATOM 8 O4' A A 14 -17.863 -14.902 -11.180 1.00 54.52 O
ATOM 9 C3' A A 14 -16.067 -16.120 -12.178 1.00 44.49 C
ATOM 10 O3' A A 14 -16.658 -17.026 -13.100 1.00 55.76 O
ATOM 11 C2' A A 14 -16.162 -14.718 -12.776 1.00 53.32 C
ATOM 12 O2' A A 14 -15.949 -14.706 -14.177 1.00 48.50 O
ATOM 13 C1' A A 14 -17.617 -14.363 -12.461 1.00 51.03 C
ATOM 14 N9 A A 14 -17.898 -12.927 -12.408 1.00 50.33 N
ATOM 15 C8 A A 14 -17.530 -12.032 -11.428 1.00 47.08 C
ATOM 16 N7 A A 14 -17.933 -10.806 -11.654 1.00 41.30 N
ATOM 17 C5 A A 14 -18.612 -10.897 -12.864 1.00 43.07 C
ATOM 18 C6 A A 14 -19.269 -9.927 -13.658 1.00 42.14 C
ATOM 19 N6 A A 14 -19.324 -8.627 -13.342 1.00 36.07 N
ATOM 20 N1 A A 14 -19.854 -10.343 -14.802 1.00 38.46 N
ATOM 21 C2 A A 14 -19.761 -11.645 -15.133 1.00 47.51 C
ATOM 22 N3 A A 14 -19.153 -12.647 -14.479 1.00 44.38 N
ATOM 23 C4 A A 14 -18.597 -12.197 -13.340 1.00 41.12 C
ATOM 24 P A A 15 -16.362 -18.599 -12.977 1.00 54.06 P
ATOM 25 OP1 A A 15 -15.065 -18.755 -12.262 1.00 53.16 O
ATOM 26 OP2 A A 15 -16.549 -19.194 -14.328 1.00 51.04 O
ATOM 27 O5' A A 15 -17.528 -19.136 -12.039 1.00 53.25 O
TER

ATOM 1 O3' A B 15 -20.457 -20.521 -9.384 1.00 68.93 O
ATOM 2 P G B 16 -21.804 -19.691 -9.147 1.00 67.63 P
ATOM 3 OP1 G B 16 -22.555 -20.394 -8.073 1.00 69.38 O
ATOM 4 OP2 G B 16 -22.441 -19.482 -10.475 1.00 68.36 O
ATOM 5 O5' G B 16 -21.293 -18.295 -8.585 1.00 60.49 O
ATOM 6 C5' G B 16 -20.399 -18.245 -7.488 1.00 54.10 C
ATOM 7 C4' G B 16 -19.991 -16.824 -7.226 1.00 56.49 C
ATOM 8 O4' G B 16 -19.235 -16.319 -8.361 1.00 54.91 O
ATOM 9 C3' G B 16 -21.146 -15.847 -7.061 1.00 54.32 C
ATOM 10 O3' G B 16 -21.564 -15.814 -5.700 1.00 52.40 O
ATOM 11 C2' G B 16 -20.485 -14.533 -7.443 1.00 53.16 C
ATOM 12 O2' G B 16 -19.699 -13.995 -6.405 1.00 50.40 O
ATOM 13 C1' G B 16 -19.598 -14.972 -8.609 1.00 54.12 C
ATOM 14 N9 G B 16 -20.291 -14.908 -9.892 1.00 55.50 N
ATOM 15 C8 G B 16 -20.612 -15.956 -10.725 1.00 55.74 C
ATOM 16 N7 G B 16 -21.239 -15.574 -11.809 1.00 48.18 N
ATOM 17 C5 G B 16 -21.332 -14.193 -11.684 1.00 45.56 C
ATOM 18 C6 G B 16 -21.903 -13.221 -12.557 1.00 38.86 C
ATOM 19 O6 G B 16 -22.449 -13.391 -13.653 1.00 32.46 O
ATOM 20 N1 G B 16 -21.784 -11.940 -12.039 1.00 32.93 N
ATOM 21 C2 G B 16 -21.190 -11.624 -10.853 1.00 39.70 C
ATOM 22 N2 G B 16 -21.168 -10.322 -10.541 1.00 36.07 N
ATOM 23 N3 G B 16 -20.650 -12.514 -10.031 1.00 44.01 N
ATOM 24 C4 G B 16 -20.757 -13.766 -10.508 1.00 48.24 C
ATOM 25 P U B 17 -23.129 -15.762 -5.338 1.00 48.18 P
ATOM 26 OP1 U B 17 -23.186 -15.676 -3.853 1.00 55.22 O
ATOM 27 OP2 U B 17 -23.858 -16.855 -6.046 1.00 40.15 O
ATOM 28 O5' U B 17 -23.595 -14.336 -5.889 1.00 40.49 O
TER

Atoms:
OP1: (-16.380,-12.781,-8.501)
OP2: (-14.833,-14.455,-7.321)
C3': (-16.067,-16.120,-12.178)
C1': (-17.617,-14.363,-12.461)
C5': (-16.236,-15.782,-9.631)
O4': (-17.863,-14.902,-11.180)
C8: (-17.530,-12.032,-11.428)
O2': (-15.949,-14.706,-14.177)
C6: (-19.269,-9.927,-13.658)
C5: (-18.612,-10.897,-12.864)
C4: (-18.597,-12.197,-13.340)
P: (-15.185,-13.663,-8.524)
C4': (-16.951,-16.010,-10.938)
C2': (-16.162,-14.718,-12.776)
C2: (-19.761,-11.645,-15.133)
N1: (-19.854,-10.343,-14.802)
N3: (-19.153,-12.647,-14.479)
N6: (-19.324,-8.627,-13.342)
N7: (-17.933,-10.806,-11.654)
N9: (-17.898,-12.927,-12.408)
O5': (-15.356,-14.673,-9.739)
O3': (-16.658,-17.026,-13.100)
OP1: (-22.555,-20.394,-8.073)
OP2: (-22.441,-19.482,-10.475)
C3': (-21.146,-15.847,-7.061)
C1': (-19.598,-14.972,-8.609)
C5': (-20.399,-18.245,-7.488)
O6: (-22.449,-13.391,-13.653)
O4': (-19.235,-16.319,-8.361)
C8: (-20.612,-15.956,-10.725)
C2: (-21.190,-11.624,-10.853)
C6: (-21.903,-13.221,-12.557)
C5: (-21.332,-14.193,-11.684)
C4: (-20.757,-13.766,-10.508)
P: (-21.804,-19.691,-9.147)
C4': (-19.991,-16.824,-7.226)
C2': (-20.485,-14.533,-7.443)
O2': (-19.699,-13.995,-6.405)
N1: (-21.784,-11.940,-12.039)
N2: (-21.168,-10.322,-10.541)
N3: (-20.650,-12.514,-10.031)
N7: (-21.239,-15.574,-11.809)
N9: (-20.291,-14.908,-9.892)
O5': (-21.293,-18.295,-8.585)
O3': (-21.564,-15.814,-5.700)
Image (generated by PyMOL):
PyMOL image
show in jmol