Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B12:B113
Extra
PDB:
ATOM 1 O3' C A 11 53.150 37.524 111.929 1.00 66.14 O
ATOM 2 P A A 12 54.601 37.031 112.394 1.00 67.17 P
ATOM 3 OP1 A A 12 54.416 36.073 113.507 1.00 68.22 O
ATOM 4 OP2 A A 12 55.478 38.209 112.596 1.00 67.23 O
ATOM 5 O5' A A 12 55.158 36.257 111.123 1.00 65.67 O
ATOM 6 C5' A A 12 55.027 34.835 110.996 1.00 64.83 C
ATOM 7 C4' A A 12 55.736 34.370 109.748 1.00 64.07 C
ATOM 8 O4' A A 12 54.962 34.760 108.580 1.00 63.73 O
ATOM 9 C3' A A 12 57.137 34.947 109.532 1.00 63.16 C
ATOM 10 O3' A A 12 57.938 33.977 108.852 1.00 61.35 O
ATOM 11 C2' A A 12 56.851 36.112 108.594 1.00 62.43 C
ATOM 12 O2' A A 12 57.949 36.533 107.822 1.00 63.26 O
ATOM 13 C1' A A 12 55.794 35.479 107.700 1.00 63.02 C
ATOM 14 N9 A A 12 54.987 36.427 106.941 1.00 62.27 N
ATOM 15 C8 A A 12 53.873 37.128 107.321 1.00 61.91 C
ATOM 16 N7 A A 12 53.417 37.936 106.396 1.00 60.96 N
ATOM 17 C5 A A 12 54.286 37.747 105.337 1.00 60.08 C
ATOM 18 C6 A A 12 54.366 38.332 104.075 1.00 59.92 C
ATOM 19 N6 A A 12 53.543 39.287 103.659 1.00 59.95 N
ATOM 20 N1 A A 12 55.350 37.910 103.245 1.00 60.17 N
ATOM 21 C2 A A 12 56.206 36.974 103.687 1.00 61.41 C
ATOM 22 N3 A A 12 56.242 36.366 104.864 1.00 61.65 N
ATOM 23 C4 A A 12 55.244 36.804 105.651 1.00 61.39 C
ATOM 24 P G A 13 59.360 33.546 109.462 1.00 62.54 P
ATOM 25 OP1 G A 13 59.828 32.300 108.789 1.00 62.75 O
ATOM 26 OP2 G A 13 59.230 33.579 110.935 1.00 61.12 O
ATOM 27 O5' G A 13 60.360 34.724 109.070 1.00 61.53 O
TER
ATOM 1 O3' C B 112 55.031 30.509 113.555 1.00 64.12 O
ATOM 2 P G B 113 54.519 29.712 112.240 1.00 65.42 P
ATOM 3 OP1 G B 113 53.586 28.654 112.676 1.00 65.92 O
ATOM 4 OP2 G B 113 55.688 29.364 111.376 1.00 64.40 O
ATOM 5 O5' G B 113 53.627 30.751 111.446 1.00 63.43 O
ATOM 6 C5' G B 113 52.773 30.320 110.382 1.00 60.86 C
ATOM 7 C4' G B 113 51.904 31.468 109.963 1.00 58.95 C
ATOM 8 O4' G B 113 52.751 32.575 109.578 1.00 56.35 O
ATOM 9 C3' G B 113 51.019 31.232 108.761 1.00 58.56 C
ATOM 10 O3' G B 113 49.820 30.605 109.171 1.00 61.99 O
ATOM 11 C2' G B 113 50.768 32.646 108.274 1.00 55.29 C
ATOM 12 O2' G B 113 49.770 33.306 109.022 1.00 53.15 O
ATOM 13 C1' G B 113 52.130 33.296 108.538 1.00 54.20 C
ATOM 14 N9 G B 113 52.976 33.205 107.358 1.00 50.76 N
ATOM 15 C8 G B 113 54.067 32.397 107.160 1.00 50.22 C
ATOM 16 N7 G B 113 54.579 32.519 105.966 1.00 48.86 N
ATOM 17 C5 G B 113 53.783 33.466 105.349 1.00 47.52 C
ATOM 18 C6 G B 113 53.852 33.998 104.049 1.00 46.45 C
ATOM 19 O6 G B 113 54.639 33.708 103.151 1.00 44.59 O
ATOM 20 N1 G B 113 52.863 34.955 103.830 1.00 45.83 N
ATOM 21 C2 G B 113 51.915 35.330 104.750 1.00 47.36 C
ATOM 22 N2 G B 113 51.026 36.231 104.357 1.00 44.68 N
ATOM 23 N3 G B 113 51.843 34.837 105.976 1.00 49.03 N
ATOM 24 C4 G B 113 52.802 33.912 106.202 1.00 49.20 C
ATOM 25 P C B 114 49.117 29.536 108.208 1.00 65.19 P
ATOM 26 OP1 C B 114 48.208 28.730 109.054 1.00 67.14 O
ATOM 27 OP2 C B 114 50.166 28.859 107.399 1.00 65.51 O
ATOM 28 O5' C B 114 48.211 30.415 107.242 1.00 63.74 O
TER
ATOM 2 P A A 12 54.601 37.031 112.394 1.00 67.17 P
ATOM 3 OP1 A A 12 54.416 36.073 113.507 1.00 68.22 O
ATOM 4 OP2 A A 12 55.478 38.209 112.596 1.00 67.23 O
ATOM 5 O5' A A 12 55.158 36.257 111.123 1.00 65.67 O
ATOM 6 C5' A A 12 55.027 34.835 110.996 1.00 64.83 C
ATOM 7 C4' A A 12 55.736 34.370 109.748 1.00 64.07 C
ATOM 8 O4' A A 12 54.962 34.760 108.580 1.00 63.73 O
ATOM 9 C3' A A 12 57.137 34.947 109.532 1.00 63.16 C
ATOM 10 O3' A A 12 57.938 33.977 108.852 1.00 61.35 O
ATOM 11 C2' A A 12 56.851 36.112 108.594 1.00 62.43 C
ATOM 12 O2' A A 12 57.949 36.533 107.822 1.00 63.26 O
ATOM 13 C1' A A 12 55.794 35.479 107.700 1.00 63.02 C
ATOM 14 N9 A A 12 54.987 36.427 106.941 1.00 62.27 N
ATOM 15 C8 A A 12 53.873 37.128 107.321 1.00 61.91 C
ATOM 16 N7 A A 12 53.417 37.936 106.396 1.00 60.96 N
ATOM 17 C5 A A 12 54.286 37.747 105.337 1.00 60.08 C
ATOM 18 C6 A A 12 54.366 38.332 104.075 1.00 59.92 C
ATOM 19 N6 A A 12 53.543 39.287 103.659 1.00 59.95 N
ATOM 20 N1 A A 12 55.350 37.910 103.245 1.00 60.17 N
ATOM 21 C2 A A 12 56.206 36.974 103.687 1.00 61.41 C
ATOM 22 N3 A A 12 56.242 36.366 104.864 1.00 61.65 N
ATOM 23 C4 A A 12 55.244 36.804 105.651 1.00 61.39 C
ATOM 24 P G A 13 59.360 33.546 109.462 1.00 62.54 P
ATOM 25 OP1 G A 13 59.828 32.300 108.789 1.00 62.75 O
ATOM 26 OP2 G A 13 59.230 33.579 110.935 1.00 61.12 O
ATOM 27 O5' G A 13 60.360 34.724 109.070 1.00 61.53 O
TER
ATOM 1 O3' C B 112 55.031 30.509 113.555 1.00 64.12 O
ATOM 2 P G B 113 54.519 29.712 112.240 1.00 65.42 P
ATOM 3 OP1 G B 113 53.586 28.654 112.676 1.00 65.92 O
ATOM 4 OP2 G B 113 55.688 29.364 111.376 1.00 64.40 O
ATOM 5 O5' G B 113 53.627 30.751 111.446 1.00 63.43 O
ATOM 6 C5' G B 113 52.773 30.320 110.382 1.00 60.86 C
ATOM 7 C4' G B 113 51.904 31.468 109.963 1.00 58.95 C
ATOM 8 O4' G B 113 52.751 32.575 109.578 1.00 56.35 O
ATOM 9 C3' G B 113 51.019 31.232 108.761 1.00 58.56 C
ATOM 10 O3' G B 113 49.820 30.605 109.171 1.00 61.99 O
ATOM 11 C2' G B 113 50.768 32.646 108.274 1.00 55.29 C
ATOM 12 O2' G B 113 49.770 33.306 109.022 1.00 53.15 O
ATOM 13 C1' G B 113 52.130 33.296 108.538 1.00 54.20 C
ATOM 14 N9 G B 113 52.976 33.205 107.358 1.00 50.76 N
ATOM 15 C8 G B 113 54.067 32.397 107.160 1.00 50.22 C
ATOM 16 N7 G B 113 54.579 32.519 105.966 1.00 48.86 N
ATOM 17 C5 G B 113 53.783 33.466 105.349 1.00 47.52 C
ATOM 18 C6 G B 113 53.852 33.998 104.049 1.00 46.45 C
ATOM 19 O6 G B 113 54.639 33.708 103.151 1.00 44.59 O
ATOM 20 N1 G B 113 52.863 34.955 103.830 1.00 45.83 N
ATOM 21 C2 G B 113 51.915 35.330 104.750 1.00 47.36 C
ATOM 22 N2 G B 113 51.026 36.231 104.357 1.00 44.68 N
ATOM 23 N3 G B 113 51.843 34.837 105.976 1.00 49.03 N
ATOM 24 C4 G B 113 52.802 33.912 106.202 1.00 49.20 C
ATOM 25 P C B 114 49.117 29.536 108.208 1.00 65.19 P
ATOM 26 OP1 C B 114 48.208 28.730 109.054 1.00 67.14 O
ATOM 27 OP2 C B 114 50.166 28.859 107.399 1.00 65.51 O
ATOM 28 O5' C B 114 48.211 30.415 107.242 1.00 63.74 O
TER
Atoms:
OP1: (54.416,36.073,113.507)
OP2: (55.478,38.209,112.596)
C3': (57.137,34.947,109.532)
C1': (55.794,35.479,107.700)
C5': (55.027,34.835,110.996)
O4': (54.962,34.760,108.580)
C8: (53.873,37.128,107.321)
O2': (57.949,36.533,107.822)
C6: (54.366,38.332,104.075)
C5: (54.286,37.747,105.337)
C4: (55.244,36.804,105.651)
P: (54.601,37.031,112.394)
C4': (55.736,34.370,109.748)
C2': (56.851,36.112,108.594)
C2: (56.206,36.974,103.687)
N1: (55.350,37.910,103.245)
N3: (56.242,36.366,104.864)
N6: (53.543,39.287,103.659)
N7: (53.417,37.936,106.396)
N9: (54.987,36.427,106.941)
O5': (55.158,36.257,111.123)
O3': (57.938,33.977,108.852)
OP2: (55.478,38.209,112.596)
C3': (57.137,34.947,109.532)
C1': (55.794,35.479,107.700)
C5': (55.027,34.835,110.996)
O4': (54.962,34.760,108.580)
C8: (53.873,37.128,107.321)
O2': (57.949,36.533,107.822)
C6: (54.366,38.332,104.075)
C5: (54.286,37.747,105.337)
C4: (55.244,36.804,105.651)
P: (54.601,37.031,112.394)
C4': (55.736,34.370,109.748)
C2': (56.851,36.112,108.594)
C2: (56.206,36.974,103.687)
N1: (55.350,37.910,103.245)
N3: (56.242,36.366,104.864)
N6: (53.543,39.287,103.659)
N7: (53.417,37.936,106.396)
N9: (54.987,36.427,106.941)
O5': (55.158,36.257,111.123)
O3': (57.938,33.977,108.852)
OP1: (53.586,28.654,112.676)
OP2: (55.688,29.364,111.376)
C3': (51.019,31.232,108.761)
C1': (52.130,33.296,108.538)
C5': (52.773,30.320,110.382)
O6: (54.639,33.708,103.151)
O4': (52.751,32.575,109.578)
C8: (54.067,32.397,107.160)
C2: (51.915,35.330,104.750)
C6: (53.852,33.998,104.049)
C5: (53.783,33.466,105.349)
C4: (52.802,33.912,106.202)
P: (54.519,29.712,112.240)
C4': (51.904,31.468,109.963)
C2': (50.768,32.646,108.274)
O2': (49.770,33.306,109.022)
N1: (52.863,34.955,103.830)
N2: (51.026,36.231,104.357)
N3: (51.843,34.837,105.976)
N7: (54.579,32.519,105.966)
N9: (52.976,33.205,107.358)
O5': (53.627,30.751,111.446)
O3': (49.820,30.605,109.171)
OP2: (55.688,29.364,111.376)
C3': (51.019,31.232,108.761)
C1': (52.130,33.296,108.538)
C5': (52.773,30.320,110.382)
O6: (54.639,33.708,103.151)
O4': (52.751,32.575,109.578)
C8: (54.067,32.397,107.160)
C2: (51.915,35.330,104.750)
C6: (53.852,33.998,104.049)
C5: (53.783,33.466,105.349)
C4: (52.802,33.912,106.202)
P: (54.519,29.712,112.240)
C4': (51.904,31.468,109.963)
C2': (50.768,32.646,108.274)
O2': (49.770,33.306,109.022)
N1: (52.863,34.955,103.830)
N2: (51.026,36.231,104.357)
N3: (51.843,34.837,105.976)
N7: (54.579,32.519,105.966)
N9: (52.976,33.205,107.358)
O5': (53.627,30.751,111.446)
O3': (49.820,30.605,109.171)
Image (generated by PyMOL):