Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2420:A2229
Extra
PDB:
ATOM 1 O3' A A2419 -94.818 -36.246 30.176 1.00 21.42 O
ATOM 2 P G A2420 -94.645 -36.557 28.602 1.00 31.90 P
ATOM 3 OP1 G A2420 -95.425 -35.531 27.864 1.00 35.09 O
ATOM 4 OP2 G A2420 -94.908 -38.006 28.357 1.00 42.42 O
ATOM 5 O5' G A2420 -93.074 -36.339 28.328 1.00 50.14 O
ATOM 6 C5' G A2420 -92.429 -36.898 27.181 1.00 43.64 C
ATOM 7 C4' G A2420 -91.583 -35.835 26.511 1.00 33.62 C
ATOM 8 O4' G A2420 -90.918 -35.027 27.511 1.00 33.57 O
ATOM 9 C3' G A2420 -90.506 -36.359 25.577 1.00 29.72 C
ATOM 10 O3' G A2420 -91.030 -36.319 24.276 1.00 26.61 O
ATOM 11 C2' G A2420 -89.434 -35.295 25.722 1.00 37.60 C
ATOM 12 O2' G A2420 -89.737 -34.179 24.912 1.00 49.22 O
ATOM 13 C1' G A2420 -89.549 -34.949 27.202 1.00 39.14 C
ATOM 14 N9 G A2420 -88.847 -35.883 28.083 1.00 42.22 N
ATOM 15 C8 G A2420 -89.382 -36.745 29.017 1.00 43.65 C
ATOM 16 N7 G A2420 -88.481 -37.452 29.648 1.00 42.64 N
ATOM 17 C5 G A2420 -87.270 -37.040 29.104 1.00 43.70 C
ATOM 18 C6 G A2420 -85.943 -37.448 29.378 1.00 47.77 C
ATOM 19 O6 G A2420 -85.554 -38.284 30.192 1.00 68.26 O
ATOM 20 N1 G A2420 -85.010 -36.778 28.599 1.00 48.39 N
ATOM 21 C2 G A2420 -85.325 -35.823 27.668 1.00 48.20 C
ATOM 22 N2 G A2420 -84.304 -35.271 27.014 1.00 44.36 N
ATOM 23 N3 G A2420 -86.557 -35.427 27.386 1.00 51.42 N
ATOM 24 C4 G A2420 -87.481 -36.076 28.141 1.00 48.06 C
ATOM 25 P U A2421 -90.754 -37.462 23.197 1.00 45.94 P
ATOM 26 OP1 U A2421 -91.419 -37.063 21.931 1.00 40.27 O
ATOM 27 OP2 U A2421 -91.039 -38.774 23.820 1.00 36.24 O
ATOM 28 O5' U A2421 -89.185 -37.329 22.969 1.00 51.47 O
TER
ATOM 1 O3' U B2228 -92.911 -43.663 36.524 1.00 38.72 O
ATOM 2 P U B2229 -93.443 -44.164 35.095 1.00 47.44 P
ATOM 3 OP1 U B2229 -94.816 -44.682 35.274 1.00 58.16 O
ATOM 4 OP2 U B2229 -92.431 -45.001 34.432 1.00 57.81 O
ATOM 5 O5' U B2229 -93.505 -42.813 34.254 1.00 63.53 O
ATOM 6 C5' U B2229 -94.563 -41.884 34.468 1.00 67.37 C
ATOM 7 C4' U B2229 -94.644 -40.957 33.283 1.00 52.71 C
ATOM 8 O4' U B2229 -93.487 -40.094 33.284 1.00 44.99 O
ATOM 9 C3' U B2229 -94.561 -41.689 31.961 1.00 56.60 C
ATOM 10 O3' U B2229 -95.839 -42.302 31.689 1.00 46.70 O
ATOM 11 C2' U B2229 -94.183 -40.502 31.080 1.00 59.37 C
ATOM 12 O2' U B2229 -95.278 -39.631 30.931 1.00 59.96 O
ATOM 13 C1' U B2229 -93.145 -39.792 31.949 1.00 49.93 C
ATOM 14 N1 U B2229 -91.713 -40.182 31.782 1.00 51.71 N
ATOM 15 C2 U B2229 -90.775 -39.200 31.556 1.00 64.19 C
ATOM 16 O2 U B2229 -91.043 -38.019 31.467 1.00 66.86 O
ATOM 17 N3 U B2229 -89.486 -39.637 31.420 1.00 75.54 N
ATOM 18 C4 U B2229 -89.037 -40.937 31.493 1.00 65.92 C
ATOM 19 O4 U B2229 -87.840 -41.183 31.354 1.00 56.71 O
ATOM 20 C5 U B2229 -90.072 -41.902 31.739 1.00 73.62 C
ATOM 21 C6 U B2229 -91.337 -41.499 31.874 1.00 62.04 C
ATOM 22 P G B2230 -96.197 -42.969 30.267 1.00 30.29 P
ATOM 23 OP1 G B2230 -95.037 -43.710 29.722 1.00 39.33 O
ATOM 24 OP2 G B2230 -96.854 -41.916 29.447 1.00 40.21 O
ATOM 25 O5' G B2230 -97.308 -44.043 30.670 1.00 41.78 O
TER
ATOM 2 P G A2420 -94.645 -36.557 28.602 1.00 31.90 P
ATOM 3 OP1 G A2420 -95.425 -35.531 27.864 1.00 35.09 O
ATOM 4 OP2 G A2420 -94.908 -38.006 28.357 1.00 42.42 O
ATOM 5 O5' G A2420 -93.074 -36.339 28.328 1.00 50.14 O
ATOM 6 C5' G A2420 -92.429 -36.898 27.181 1.00 43.64 C
ATOM 7 C4' G A2420 -91.583 -35.835 26.511 1.00 33.62 C
ATOM 8 O4' G A2420 -90.918 -35.027 27.511 1.00 33.57 O
ATOM 9 C3' G A2420 -90.506 -36.359 25.577 1.00 29.72 C
ATOM 10 O3' G A2420 -91.030 -36.319 24.276 1.00 26.61 O
ATOM 11 C2' G A2420 -89.434 -35.295 25.722 1.00 37.60 C
ATOM 12 O2' G A2420 -89.737 -34.179 24.912 1.00 49.22 O
ATOM 13 C1' G A2420 -89.549 -34.949 27.202 1.00 39.14 C
ATOM 14 N9 G A2420 -88.847 -35.883 28.083 1.00 42.22 N
ATOM 15 C8 G A2420 -89.382 -36.745 29.017 1.00 43.65 C
ATOM 16 N7 G A2420 -88.481 -37.452 29.648 1.00 42.64 N
ATOM 17 C5 G A2420 -87.270 -37.040 29.104 1.00 43.70 C
ATOM 18 C6 G A2420 -85.943 -37.448 29.378 1.00 47.77 C
ATOM 19 O6 G A2420 -85.554 -38.284 30.192 1.00 68.26 O
ATOM 20 N1 G A2420 -85.010 -36.778 28.599 1.00 48.39 N
ATOM 21 C2 G A2420 -85.325 -35.823 27.668 1.00 48.20 C
ATOM 22 N2 G A2420 -84.304 -35.271 27.014 1.00 44.36 N
ATOM 23 N3 G A2420 -86.557 -35.427 27.386 1.00 51.42 N
ATOM 24 C4 G A2420 -87.481 -36.076 28.141 1.00 48.06 C
ATOM 25 P U A2421 -90.754 -37.462 23.197 1.00 45.94 P
ATOM 26 OP1 U A2421 -91.419 -37.063 21.931 1.00 40.27 O
ATOM 27 OP2 U A2421 -91.039 -38.774 23.820 1.00 36.24 O
ATOM 28 O5' U A2421 -89.185 -37.329 22.969 1.00 51.47 O
TER
ATOM 1 O3' U B2228 -92.911 -43.663 36.524 1.00 38.72 O
ATOM 2 P U B2229 -93.443 -44.164 35.095 1.00 47.44 P
ATOM 3 OP1 U B2229 -94.816 -44.682 35.274 1.00 58.16 O
ATOM 4 OP2 U B2229 -92.431 -45.001 34.432 1.00 57.81 O
ATOM 5 O5' U B2229 -93.505 -42.813 34.254 1.00 63.53 O
ATOM 6 C5' U B2229 -94.563 -41.884 34.468 1.00 67.37 C
ATOM 7 C4' U B2229 -94.644 -40.957 33.283 1.00 52.71 C
ATOM 8 O4' U B2229 -93.487 -40.094 33.284 1.00 44.99 O
ATOM 9 C3' U B2229 -94.561 -41.689 31.961 1.00 56.60 C
ATOM 10 O3' U B2229 -95.839 -42.302 31.689 1.00 46.70 O
ATOM 11 C2' U B2229 -94.183 -40.502 31.080 1.00 59.37 C
ATOM 12 O2' U B2229 -95.278 -39.631 30.931 1.00 59.96 O
ATOM 13 C1' U B2229 -93.145 -39.792 31.949 1.00 49.93 C
ATOM 14 N1 U B2229 -91.713 -40.182 31.782 1.00 51.71 N
ATOM 15 C2 U B2229 -90.775 -39.200 31.556 1.00 64.19 C
ATOM 16 O2 U B2229 -91.043 -38.019 31.467 1.00 66.86 O
ATOM 17 N3 U B2229 -89.486 -39.637 31.420 1.00 75.54 N
ATOM 18 C4 U B2229 -89.037 -40.937 31.493 1.00 65.92 C
ATOM 19 O4 U B2229 -87.840 -41.183 31.354 1.00 56.71 O
ATOM 20 C5 U B2229 -90.072 -41.902 31.739 1.00 73.62 C
ATOM 21 C6 U B2229 -91.337 -41.499 31.874 1.00 62.04 C
ATOM 22 P G B2230 -96.197 -42.969 30.267 1.00 30.29 P
ATOM 23 OP1 G B2230 -95.037 -43.710 29.722 1.00 39.33 O
ATOM 24 OP2 G B2230 -96.854 -41.916 29.447 1.00 40.21 O
ATOM 25 O5' G B2230 -97.308 -44.043 30.670 1.00 41.78 O
TER
Atoms:
OP1: (-95.425,-35.531,27.864)
OP2: (-94.908,-38.006,28.357)
C3': (-90.506,-36.359,25.577)
C1': (-89.549,-34.949,27.202)
C5': (-92.429,-36.898,27.181)
O6: (-85.554,-38.284,30.192)
O4': (-90.918,-35.027,27.511)
C8: (-89.382,-36.745,29.017)
C2: (-85.325,-35.823,27.668)
C6: (-85.943,-37.448,29.378)
C5: (-87.270,-37.040,29.104)
C4: (-87.481,-36.076,28.141)
P: (-94.645,-36.557,28.602)
C4': (-91.583,-35.835,26.511)
C2': (-89.434,-35.295,25.722)
O2': (-89.737,-34.179,24.912)
N1: (-85.010,-36.778,28.599)
N2: (-84.304,-35.271,27.014)
N3: (-86.557,-35.427,27.386)
N7: (-88.481,-37.452,29.648)
N9: (-88.847,-35.883,28.083)
O5': (-93.074,-36.339,28.328)
O3': (-91.030,-36.319,24.276)
OP2: (-94.908,-38.006,28.357)
C3': (-90.506,-36.359,25.577)
C1': (-89.549,-34.949,27.202)
C5': (-92.429,-36.898,27.181)
O6: (-85.554,-38.284,30.192)
O4': (-90.918,-35.027,27.511)
C8: (-89.382,-36.745,29.017)
C2: (-85.325,-35.823,27.668)
C6: (-85.943,-37.448,29.378)
C5: (-87.270,-37.040,29.104)
C4: (-87.481,-36.076,28.141)
P: (-94.645,-36.557,28.602)
C4': (-91.583,-35.835,26.511)
C2': (-89.434,-35.295,25.722)
O2': (-89.737,-34.179,24.912)
N1: (-85.010,-36.778,28.599)
N2: (-84.304,-35.271,27.014)
N3: (-86.557,-35.427,27.386)
N7: (-88.481,-37.452,29.648)
N9: (-88.847,-35.883,28.083)
O5': (-93.074,-36.339,28.328)
O3': (-91.030,-36.319,24.276)
C4: (-89.037,-40.937,31.493)
N3: (-89.486,-39.637,31.420)
OP1: (-94.816,-44.682,35.274)
OP2: (-92.431,-45.001,34.432)
C2: (-90.775,-39.200,31.556)
C1': (-93.145,-39.792,31.949)
C3': (-94.561,-41.689,31.961)
O5': (-93.505,-42.813,34.254)
O4': (-93.487,-40.094,33.284)
C5': (-94.563,-41.884,34.468)
P: (-93.443,-44.164,35.095)
C4': (-94.644,-40.957,33.283)
C2': (-94.183,-40.502,31.080)
O2': (-95.278,-39.631,30.931)
N1: (-91.713,-40.182,31.782)
O4: (-87.840,-41.183,31.354)
O2: (-91.043,-38.019,31.467)
C6: (-91.337,-41.499,31.874)
C5: (-90.072,-41.902,31.739)
O3': (-95.839,-42.302,31.689)
N3: (-89.486,-39.637,31.420)
OP1: (-94.816,-44.682,35.274)
OP2: (-92.431,-45.001,34.432)
C2: (-90.775,-39.200,31.556)
C1': (-93.145,-39.792,31.949)
C3': (-94.561,-41.689,31.961)
O5': (-93.505,-42.813,34.254)
O4': (-93.487,-40.094,33.284)
C5': (-94.563,-41.884,34.468)
P: (-93.443,-44.164,35.095)
C4': (-94.644,-40.957,33.283)
C2': (-94.183,-40.502,31.080)
O2': (-95.278,-39.631,30.931)
N1: (-91.713,-40.182,31.782)
O4: (-87.840,-41.183,31.354)
O2: (-91.043,-38.019,31.467)
C6: (-91.337,-41.499,31.874)
C5: (-90.072,-41.902,31.739)
O3': (-95.839,-42.302,31.689)
Image (generated by PyMOL):