Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNR:A16:A18
Extra
PDB:
ATOM 1 O3' C A 15 5.070 7.910 8.154 1.00 40.27 O
ATOM 2 P A A 16 5.027 6.333 8.416 1.00 41.50 P
ATOM 3 OP1 A A 16 4.884 6.075 9.867 1.00 43.17 O
ATOM 4 OP2 A A 16 6.188 5.773 7.676 1.00 43.97 O
ATOM 5 O5' A A 16 3.687 5.836 7.711 1.00 39.42 O
ATOM 6 C5' A A 16 3.458 4.448 7.479 1.00 34.59 C
ATOM 7 C4' A A 16 1.974 4.159 7.429 1.00 35.27 C
ATOM 8 O4' A A 16 1.391 4.304 8.756 1.00 32.83 O
ATOM 9 C3' A A 16 1.142 5.049 6.511 1.00 34.69 C
ATOM 10 O3' A A 16 0.023 4.309 6.037 1.00 38.29 O
ATOM 11 C2' A A 16 0.634 6.113 7.478 1.00 34.34 C
ATOM 12 O2' A A 16 -0.552 6.746 7.045 1.00 33.53 O
ATOM 13 C1' A A 16 0.351 5.266 8.716 1.00 32.48 C
ATOM 14 N9 A A 16 0.380 6.024 9.966 1.00 31.93 N
ATOM 15 C8 A A 16 1.489 6.455 10.648 1.00 31.91 C
ATOM 16 N7 A A 16 1.210 7.103 11.753 1.00 30.86 N
ATOM 17 C5 A A 16 -0.178 7.103 11.800 1.00 28.43 C
ATOM 18 C6 A A 16 -1.093 7.640 12.723 1.00 30.07 C
ATOM 19 N6 A A 16 -0.734 8.304 13.831 1.00 27.85 N
ATOM 20 N1 A A 16 -2.408 7.473 12.469 1.00 28.62 N
ATOM 21 C2 A A 16 -2.766 6.813 11.364 1.00 28.99 C
ATOM 22 N3 A A 16 -2.002 6.265 10.425 1.00 28.62 N
ATOM 23 C4 A A 16 -0.702 6.446 10.706 1.00 29.50 C
ATOM 24 P A A 17 0.157 3.420 4.708 1.00 39.26 P
ATOM 25 OP1 A A 17 1.238 3.977 3.855 1.00 38.32 O
ATOM 26 OP2 A A 17 -1.216 3.270 4.160 1.00 39.34 O
ATOM 27 O5' A A 17 0.637 1.997 5.234 1.00 38.98 O
TER
ATOM 1 O3' A B 17 1.911 -1.842 6.640 1.00 37.55 O
ATOM 2 P G B 18 1.707 -2.249 8.187 1.00 37.74 P
ATOM 3 OP1 G B 18 2.581 -3.423 8.452 1.00 39.66 O
ATOM 4 OP2 G B 18 0.253 -2.345 8.461 1.00 38.01 O
ATOM 5 O5' G B 18 2.278 -1.007 8.999 1.00 37.29 O
ATOM 6 C5' G B 18 3.659 -0.665 8.953 1.00 33.51 C
ATOM 7 C4' G B 18 3.958 0.358 10.015 1.00 30.89 C
ATOM 8 O4' G B 18 3.310 1.620 9.684 1.00 28.02 O
ATOM 9 C3' G B 18 3.430 0.001 11.396 1.00 31.12 C
ATOM 10 O3' G B 18 4.358 -0.820 12.102 1.00 31.86 O
ATOM 11 C2' G B 18 3.291 1.368 12.038 1.00 28.75 C
ATOM 12 O2' G B 18 4.531 1.855 12.494 1.00 30.56 O
ATOM 13 C1' G B 18 2.780 2.203 10.862 1.00 28.63 C
ATOM 14 N9 G B 18 1.323 2.228 10.746 1.00 25.47 N
ATOM 15 C8 G B 18 0.558 1.643 9.763 1.00 23.49 C
ATOM 16 N7 G B 18 -0.719 1.862 9.911 1.00 24.27 N
ATOM 17 C5 G B 18 -0.805 2.636 11.060 1.00 24.53 C
ATOM 18 C6 G B 18 -1.936 3.180 11.720 1.00 21.97 C
ATOM 19 O6 G B 18 -3.124 3.104 11.394 1.00 22.91 O
ATOM 20 N1 G B 18 -1.571 3.876 12.873 1.00 19.59 N
ATOM 21 C2 G B 18 -0.279 4.037 13.320 1.00 21.55 C
ATOM 22 N2 G B 18 -0.114 4.748 14.453 1.00 19.96 N
ATOM 23 N3 G B 18 0.778 3.543 12.706 1.00 22.37 N
ATOM 24 C4 G B 18 0.447 2.859 11.594 1.00 24.02 C
ATOM 25 P U B 19 3.821 -1.941 13.121 1.00 32.17 P
ATOM 26 OP1 U B 19 5.007 -2.566 13.754 1.00 34.13 O
ATOM 27 OP2 U B 19 2.835 -2.797 12.422 1.00 32.00 O
ATOM 28 O5' U B 19 3.040 -1.098 14.231 1.00 29.42 O
TER
ATOM 2 P A A 16 5.027 6.333 8.416 1.00 41.50 P
ATOM 3 OP1 A A 16 4.884 6.075 9.867 1.00 43.17 O
ATOM 4 OP2 A A 16 6.188 5.773 7.676 1.00 43.97 O
ATOM 5 O5' A A 16 3.687 5.836 7.711 1.00 39.42 O
ATOM 6 C5' A A 16 3.458 4.448 7.479 1.00 34.59 C
ATOM 7 C4' A A 16 1.974 4.159 7.429 1.00 35.27 C
ATOM 8 O4' A A 16 1.391 4.304 8.756 1.00 32.83 O
ATOM 9 C3' A A 16 1.142 5.049 6.511 1.00 34.69 C
ATOM 10 O3' A A 16 0.023 4.309 6.037 1.00 38.29 O
ATOM 11 C2' A A 16 0.634 6.113 7.478 1.00 34.34 C
ATOM 12 O2' A A 16 -0.552 6.746 7.045 1.00 33.53 O
ATOM 13 C1' A A 16 0.351 5.266 8.716 1.00 32.48 C
ATOM 14 N9 A A 16 0.380 6.024 9.966 1.00 31.93 N
ATOM 15 C8 A A 16 1.489 6.455 10.648 1.00 31.91 C
ATOM 16 N7 A A 16 1.210 7.103 11.753 1.00 30.86 N
ATOM 17 C5 A A 16 -0.178 7.103 11.800 1.00 28.43 C
ATOM 18 C6 A A 16 -1.093 7.640 12.723 1.00 30.07 C
ATOM 19 N6 A A 16 -0.734 8.304 13.831 1.00 27.85 N
ATOM 20 N1 A A 16 -2.408 7.473 12.469 1.00 28.62 N
ATOM 21 C2 A A 16 -2.766 6.813 11.364 1.00 28.99 C
ATOM 22 N3 A A 16 -2.002 6.265 10.425 1.00 28.62 N
ATOM 23 C4 A A 16 -0.702 6.446 10.706 1.00 29.50 C
ATOM 24 P A A 17 0.157 3.420 4.708 1.00 39.26 P
ATOM 25 OP1 A A 17 1.238 3.977 3.855 1.00 38.32 O
ATOM 26 OP2 A A 17 -1.216 3.270 4.160 1.00 39.34 O
ATOM 27 O5' A A 17 0.637 1.997 5.234 1.00 38.98 O
TER
ATOM 1 O3' A B 17 1.911 -1.842 6.640 1.00 37.55 O
ATOM 2 P G B 18 1.707 -2.249 8.187 1.00 37.74 P
ATOM 3 OP1 G B 18 2.581 -3.423 8.452 1.00 39.66 O
ATOM 4 OP2 G B 18 0.253 -2.345 8.461 1.00 38.01 O
ATOM 5 O5' G B 18 2.278 -1.007 8.999 1.00 37.29 O
ATOM 6 C5' G B 18 3.659 -0.665 8.953 1.00 33.51 C
ATOM 7 C4' G B 18 3.958 0.358 10.015 1.00 30.89 C
ATOM 8 O4' G B 18 3.310 1.620 9.684 1.00 28.02 O
ATOM 9 C3' G B 18 3.430 0.001 11.396 1.00 31.12 C
ATOM 10 O3' G B 18 4.358 -0.820 12.102 1.00 31.86 O
ATOM 11 C2' G B 18 3.291 1.368 12.038 1.00 28.75 C
ATOM 12 O2' G B 18 4.531 1.855 12.494 1.00 30.56 O
ATOM 13 C1' G B 18 2.780 2.203 10.862 1.00 28.63 C
ATOM 14 N9 G B 18 1.323 2.228 10.746 1.00 25.47 N
ATOM 15 C8 G B 18 0.558 1.643 9.763 1.00 23.49 C
ATOM 16 N7 G B 18 -0.719 1.862 9.911 1.00 24.27 N
ATOM 17 C5 G B 18 -0.805 2.636 11.060 1.00 24.53 C
ATOM 18 C6 G B 18 -1.936 3.180 11.720 1.00 21.97 C
ATOM 19 O6 G B 18 -3.124 3.104 11.394 1.00 22.91 O
ATOM 20 N1 G B 18 -1.571 3.876 12.873 1.00 19.59 N
ATOM 21 C2 G B 18 -0.279 4.037 13.320 1.00 21.55 C
ATOM 22 N2 G B 18 -0.114 4.748 14.453 1.00 19.96 N
ATOM 23 N3 G B 18 0.778 3.543 12.706 1.00 22.37 N
ATOM 24 C4 G B 18 0.447 2.859 11.594 1.00 24.02 C
ATOM 25 P U B 19 3.821 -1.941 13.121 1.00 32.17 P
ATOM 26 OP1 U B 19 5.007 -2.566 13.754 1.00 34.13 O
ATOM 27 OP2 U B 19 2.835 -2.797 12.422 1.00 32.00 O
ATOM 28 O5' U B 19 3.040 -1.098 14.231 1.00 29.42 O
TER
Atoms:
OP1: (4.884,6.075,9.867)
OP2: (6.188,5.773,7.676)
C3': (1.142,5.049,6.511)
C1': (0.351,5.266,8.716)
C5': (3.458,4.448,7.479)
O4': (1.391,4.304,8.756)
C8: (1.489,6.455,10.648)
O2': (-0.552,6.746,7.045)
C6: (-1.093,7.640,12.723)
C5: (-0.178,7.103,11.800)
C4: (-0.702,6.446,10.706)
P: (5.027,6.333,8.416)
C4': (1.974,4.159,7.429)
C2': (0.634,6.113,7.478)
C2: (-2.766,6.813,11.364)
N1: (-2.408,7.473,12.469)
N3: (-2.002,6.265,10.425)
N6: (-0.734,8.304,13.831)
N7: (1.210,7.103,11.753)
N9: (0.380,6.024,9.966)
O5': (3.687,5.836,7.711)
O3': (0.023,4.309,6.037)
OP2: (6.188,5.773,7.676)
C3': (1.142,5.049,6.511)
C1': (0.351,5.266,8.716)
C5': (3.458,4.448,7.479)
O4': (1.391,4.304,8.756)
C8: (1.489,6.455,10.648)
O2': (-0.552,6.746,7.045)
C6: (-1.093,7.640,12.723)
C5: (-0.178,7.103,11.800)
C4: (-0.702,6.446,10.706)
P: (5.027,6.333,8.416)
C4': (1.974,4.159,7.429)
C2': (0.634,6.113,7.478)
C2: (-2.766,6.813,11.364)
N1: (-2.408,7.473,12.469)
N3: (-2.002,6.265,10.425)
N6: (-0.734,8.304,13.831)
N7: (1.210,7.103,11.753)
N9: (0.380,6.024,9.966)
O5': (3.687,5.836,7.711)
O3': (0.023,4.309,6.037)
OP1: (2.581,-3.423,8.452)
OP2: (0.253,-2.345,8.461)
C3': (3.430,0.001,11.396)
C1': (2.780,2.203,10.862)
C5': (3.659,-0.665,8.953)
O6: (-3.124,3.104,11.394)
O4': (3.310,1.620,9.684)
C8: (0.558,1.643,9.763)
C2: (-0.279,4.037,13.320)
C6: (-1.936,3.180,11.720)
C5: (-0.805,2.636,11.060)
C4: (0.447,2.859,11.594)
P: (1.707,-2.249,8.187)
C4': (3.958,0.358,10.015)
C2': (3.291,1.368,12.038)
O2': (4.531,1.855,12.494)
N1: (-1.571,3.876,12.873)
N2: (-0.114,4.748,14.453)
N3: (0.778,3.543,12.706)
N7: (-0.719,1.862,9.911)
N9: (1.323,2.228,10.746)
O5': (2.278,-1.007,8.999)
O3': (4.358,-0.820,12.102)
OP2: (0.253,-2.345,8.461)
C3': (3.430,0.001,11.396)
C1': (2.780,2.203,10.862)
C5': (3.659,-0.665,8.953)
O6: (-3.124,3.104,11.394)
O4': (3.310,1.620,9.684)
C8: (0.558,1.643,9.763)
C2: (-0.279,4.037,13.320)
C6: (-1.936,3.180,11.720)
C5: (-0.805,2.636,11.060)
C4: (0.447,2.859,11.594)
P: (1.707,-2.249,8.187)
C4': (3.958,0.358,10.015)
C2': (3.291,1.368,12.038)
O2': (4.531,1.855,12.494)
N1: (-1.571,3.876,12.873)
N2: (-0.114,4.748,14.453)
N3: (0.778,3.543,12.706)
N7: (-0.719,1.862,9.911)
N9: (1.323,2.228,10.746)
O5': (2.278,-1.007,8.999)
O3': (4.358,-0.820,12.102)
Image (generated by PyMOL):