Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1T0D:A10:A9
Extra
PDB:
ATOM 1 O3' G A 9 -4.533 -9.000 -9.571 1.00 20.39 O
ATOM 2 P U A 10 -3.746 -10.376 -9.301 1.00 20.86 P
ATOM 3 OP1 U A 10 -3.867 -11.206 -10.523 1.00 21.34 O
ATOM 4 OP2 U A 10 -4.164 -10.934 -7.996 1.00 19.90 O
ATOM 5 O5' U A 10 -2.220 -9.927 -9.124 1.00 20.34 O
ATOM 6 C5' U A 10 -1.532 -9.203 -10.138 1.00 17.98 C
ATOM 7 C4' U A 10 -0.081 -9.007 -9.743 1.00 19.80 C
ATOM 8 O4' U A 10 0.048 -7.963 -8.740 1.00 18.70 O
ATOM 9 C3' U A 10 0.587 -10.230 -9.140 1.00 17.57 C
ATOM 10 O3' U A 10 1.059 -11.055 -10.198 1.00 15.51 O
ATOM 11 C2' U A 10 1.702 -9.607 -8.297 1.00 18.24 C
ATOM 12 O2' U A 10 2.841 -9.237 -9.056 1.00 16.39 O
ATOM 13 C1' U A 10 1.029 -8.329 -7.788 1.00 16.70 C
ATOM 14 N1 U A 10 0.362 -8.438 -6.482 1.00 17.71 N
ATOM 15 C2 U A 10 1.112 -8.189 -5.339 1.00 16.92 C
ATOM 16 O2 U A 10 2.324 -7.950 -5.367 1.00 15.00 O
ATOM 17 N3 U A 10 0.399 -8.233 -4.160 1.00 15.59 N
ATOM 18 C4 U A 10 -0.955 -8.506 -4.010 1.00 19.20 C
ATOM 19 O4 U A 10 -1.466 -8.430 -2.893 1.00 18.06 O
ATOM 20 C5 U A 10 -1.651 -8.792 -5.235 1.00 16.89 C
ATOM 21 C6 U A 10 -0.986 -8.752 -6.399 1.00 18.24 C
ATOM 22 P C A 11 1.160 -12.644 -9.992 1.00 19.78 P
ATOM 23 OP1 C A 11 1.394 -13.259 -11.330 1.00 20.27 O
ATOM 24 OP2 C A 11 0.009 -13.098 -9.167 1.00 21.99 O
ATOM 25 O5' C A 11 2.478 -12.855 -9.122 1.00 19.89 O
TER
ATOM 1 O3' A B 8 -8.636 -9.529 -5.628 1.00 27.86 O
ATOM 2 P G B 9 -7.293 -8.772 -5.177 1.00 27.42 P
ATOM 3 OP1 G B 9 -6.556 -9.685 -4.271 1.00 28.18 O
ATOM 4 OP2 G B 9 -7.632 -7.402 -4.727 1.00 27.83 O
ATOM 5 O5' G B 9 -6.440 -8.654 -6.514 1.00 28.79 O
ATOM 6 C5' G B 9 -7.013 -8.128 -7.706 1.00 25.78 C
ATOM 7 C4' G B 9 -5.976 -7.354 -8.468 1.00 24.35 C
ATOM 8 O4' G B 9 -5.718 -6.109 -7.768 1.00 25.23 O
ATOM 9 C3' G B 9 -4.610 -8.023 -8.538 1.00 23.05 C
ATOM 10 O3' G B 9 -4.533 -9.000 -9.571 1.00 20.39 O
ATOM 11 C2' G B 9 -3.702 -6.832 -8.793 1.00 23.62 C
ATOM 12 O2' G B 9 -3.768 -6.410 -10.142 1.00 25.59 O
ATOM 13 C1' G B 9 -4.336 -5.780 -7.878 1.00 23.48 C
ATOM 14 N9 G B 9 -3.769 -5.763 -6.531 1.00 23.40 N
ATOM 15 C8 G B 9 -4.416 -6.080 -5.359 1.00 23.14 C
ATOM 16 N7 G B 9 -3.656 -5.957 -4.303 1.00 22.39 N
ATOM 17 C5 G B 9 -2.431 -5.533 -4.803 1.00 21.44 C
ATOM 18 C6 G B 9 -1.219 -5.221 -4.129 1.00 20.43 C
ATOM 19 O6 G B 9 -0.991 -5.224 -2.913 1.00 16.60 O
ATOM 20 N1 G B 9 -0.216 -4.858 -5.025 1.00 19.09 N
ATOM 21 C2 G B 9 -0.368 -4.772 -6.388 1.00 19.10 C
ATOM 22 N2 G B 9 0.706 -4.373 -7.085 1.00 13.56 N
ATOM 23 N3 G B 9 -1.493 -5.048 -7.023 1.00 19.63 N
ATOM 24 C4 G B 9 -2.476 -5.420 -6.177 1.00 23.04 C
ATOM 25 P U B 10 -3.746 -10.376 -9.301 1.00 20.86 P
ATOM 26 OP1 U B 10 -3.867 -11.206 -10.523 1.00 21.34 O
ATOM 27 OP2 U B 10 -4.164 -10.934 -7.996 1.00 19.90 O
ATOM 28 O5' U B 10 -2.220 -9.927 -9.124 1.00 20.34 O
TER
ATOM 2 P U A 10 -3.746 -10.376 -9.301 1.00 20.86 P
ATOM 3 OP1 U A 10 -3.867 -11.206 -10.523 1.00 21.34 O
ATOM 4 OP2 U A 10 -4.164 -10.934 -7.996 1.00 19.90 O
ATOM 5 O5' U A 10 -2.220 -9.927 -9.124 1.00 20.34 O
ATOM 6 C5' U A 10 -1.532 -9.203 -10.138 1.00 17.98 C
ATOM 7 C4' U A 10 -0.081 -9.007 -9.743 1.00 19.80 C
ATOM 8 O4' U A 10 0.048 -7.963 -8.740 1.00 18.70 O
ATOM 9 C3' U A 10 0.587 -10.230 -9.140 1.00 17.57 C
ATOM 10 O3' U A 10 1.059 -11.055 -10.198 1.00 15.51 O
ATOM 11 C2' U A 10 1.702 -9.607 -8.297 1.00 18.24 C
ATOM 12 O2' U A 10 2.841 -9.237 -9.056 1.00 16.39 O
ATOM 13 C1' U A 10 1.029 -8.329 -7.788 1.00 16.70 C
ATOM 14 N1 U A 10 0.362 -8.438 -6.482 1.00 17.71 N
ATOM 15 C2 U A 10 1.112 -8.189 -5.339 1.00 16.92 C
ATOM 16 O2 U A 10 2.324 -7.950 -5.367 1.00 15.00 O
ATOM 17 N3 U A 10 0.399 -8.233 -4.160 1.00 15.59 N
ATOM 18 C4 U A 10 -0.955 -8.506 -4.010 1.00 19.20 C
ATOM 19 O4 U A 10 -1.466 -8.430 -2.893 1.00 18.06 O
ATOM 20 C5 U A 10 -1.651 -8.792 -5.235 1.00 16.89 C
ATOM 21 C6 U A 10 -0.986 -8.752 -6.399 1.00 18.24 C
ATOM 22 P C A 11 1.160 -12.644 -9.992 1.00 19.78 P
ATOM 23 OP1 C A 11 1.394 -13.259 -11.330 1.00 20.27 O
ATOM 24 OP2 C A 11 0.009 -13.098 -9.167 1.00 21.99 O
ATOM 25 O5' C A 11 2.478 -12.855 -9.122 1.00 19.89 O
TER
ATOM 1 O3' A B 8 -8.636 -9.529 -5.628 1.00 27.86 O
ATOM 2 P G B 9 -7.293 -8.772 -5.177 1.00 27.42 P
ATOM 3 OP1 G B 9 -6.556 -9.685 -4.271 1.00 28.18 O
ATOM 4 OP2 G B 9 -7.632 -7.402 -4.727 1.00 27.83 O
ATOM 5 O5' G B 9 -6.440 -8.654 -6.514 1.00 28.79 O
ATOM 6 C5' G B 9 -7.013 -8.128 -7.706 1.00 25.78 C
ATOM 7 C4' G B 9 -5.976 -7.354 -8.468 1.00 24.35 C
ATOM 8 O4' G B 9 -5.718 -6.109 -7.768 1.00 25.23 O
ATOM 9 C3' G B 9 -4.610 -8.023 -8.538 1.00 23.05 C
ATOM 10 O3' G B 9 -4.533 -9.000 -9.571 1.00 20.39 O
ATOM 11 C2' G B 9 -3.702 -6.832 -8.793 1.00 23.62 C
ATOM 12 O2' G B 9 -3.768 -6.410 -10.142 1.00 25.59 O
ATOM 13 C1' G B 9 -4.336 -5.780 -7.878 1.00 23.48 C
ATOM 14 N9 G B 9 -3.769 -5.763 -6.531 1.00 23.40 N
ATOM 15 C8 G B 9 -4.416 -6.080 -5.359 1.00 23.14 C
ATOM 16 N7 G B 9 -3.656 -5.957 -4.303 1.00 22.39 N
ATOM 17 C5 G B 9 -2.431 -5.533 -4.803 1.00 21.44 C
ATOM 18 C6 G B 9 -1.219 -5.221 -4.129 1.00 20.43 C
ATOM 19 O6 G B 9 -0.991 -5.224 -2.913 1.00 16.60 O
ATOM 20 N1 G B 9 -0.216 -4.858 -5.025 1.00 19.09 N
ATOM 21 C2 G B 9 -0.368 -4.772 -6.388 1.00 19.10 C
ATOM 22 N2 G B 9 0.706 -4.373 -7.085 1.00 13.56 N
ATOM 23 N3 G B 9 -1.493 -5.048 -7.023 1.00 19.63 N
ATOM 24 C4 G B 9 -2.476 -5.420 -6.177 1.00 23.04 C
ATOM 25 P U B 10 -3.746 -10.376 -9.301 1.00 20.86 P
ATOM 26 OP1 U B 10 -3.867 -11.206 -10.523 1.00 21.34 O
ATOM 27 OP2 U B 10 -4.164 -10.934 -7.996 1.00 19.90 O
ATOM 28 O5' U B 10 -2.220 -9.927 -9.124 1.00 20.34 O
TER
Atoms:
C4: (-0.955,-8.506,-4.010)
N3: (0.399,-8.233,-4.160)
OP1: (-3.867,-11.206,-10.523)
OP2: (-4.164,-10.934,-7.996)
C2: (1.112,-8.189,-5.339)
C1': (1.029,-8.329,-7.788)
C3': (0.587,-10.230,-9.140)
O5': (-2.220,-9.927,-9.124)
O4': (0.048,-7.963,-8.740)
C5': (-1.532,-9.203,-10.138)
P: (-3.746,-10.376,-9.301)
C4': (-0.081,-9.007,-9.743)
C2': (1.702,-9.607,-8.297)
O2': (2.841,-9.237,-9.056)
N1: (0.362,-8.438,-6.482)
O4: (-1.466,-8.430,-2.893)
O2: (2.324,-7.950,-5.367)
C6: (-0.986,-8.752,-6.399)
C5: (-1.651,-8.792,-5.235)
O3': (1.059,-11.055,-10.198)
N3: (0.399,-8.233,-4.160)
OP1: (-3.867,-11.206,-10.523)
OP2: (-4.164,-10.934,-7.996)
C2: (1.112,-8.189,-5.339)
C1': (1.029,-8.329,-7.788)
C3': (0.587,-10.230,-9.140)
O5': (-2.220,-9.927,-9.124)
O4': (0.048,-7.963,-8.740)
C5': (-1.532,-9.203,-10.138)
P: (-3.746,-10.376,-9.301)
C4': (-0.081,-9.007,-9.743)
C2': (1.702,-9.607,-8.297)
O2': (2.841,-9.237,-9.056)
N1: (0.362,-8.438,-6.482)
O4: (-1.466,-8.430,-2.893)
O2: (2.324,-7.950,-5.367)
C6: (-0.986,-8.752,-6.399)
C5: (-1.651,-8.792,-5.235)
O3': (1.059,-11.055,-10.198)
OP1: (-6.556,-9.685,-4.271)
OP2: (-7.632,-7.402,-4.727)
C3': (-4.610,-8.023,-8.538)
C1': (-4.336,-5.780,-7.878)
C5': (-7.013,-8.128,-7.706)
O6: (-0.991,-5.224,-2.913)
O4': (-5.718,-6.109,-7.768)
C8: (-4.416,-6.080,-5.359)
C2: (-0.368,-4.772,-6.388)
C6: (-1.219,-5.221,-4.129)
C5: (-2.431,-5.533,-4.803)
C4: (-2.476,-5.420,-6.177)
P: (-7.293,-8.772,-5.177)
C4': (-5.976,-7.354,-8.468)
C2': (-3.702,-6.832,-8.793)
O2': (-3.768,-6.410,-10.142)
N1: (-0.216,-4.858,-5.025)
N2: (0.706,-4.373,-7.085)
N3: (-1.493,-5.048,-7.023)
N7: (-3.656,-5.957,-4.303)
N9: (-3.769,-5.763,-6.531)
O5': (-6.440,-8.654,-6.514)
O3': (-4.533,-9.000,-9.571)
OP2: (-7.632,-7.402,-4.727)
C3': (-4.610,-8.023,-8.538)
C1': (-4.336,-5.780,-7.878)
C5': (-7.013,-8.128,-7.706)
O6: (-0.991,-5.224,-2.913)
O4': (-5.718,-6.109,-7.768)
C8: (-4.416,-6.080,-5.359)
C2: (-0.368,-4.772,-6.388)
C6: (-1.219,-5.221,-4.129)
C5: (-2.431,-5.533,-4.803)
C4: (-2.476,-5.420,-6.177)
P: (-7.293,-8.772,-5.177)
C4': (-5.976,-7.354,-8.468)
C2': (-3.702,-6.832,-8.793)
O2': (-3.768,-6.410,-10.142)
N1: (-0.216,-4.858,-5.025)
N2: (0.706,-4.373,-7.085)
N3: (-1.493,-5.048,-7.023)
N7: (-3.656,-5.957,-4.303)
N9: (-3.769,-5.763,-6.531)
O5': (-6.440,-8.654,-6.514)
O3': (-4.533,-9.000,-9.571)
Image (generated by PyMOL):