Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A48:A176
Extra
PDB:
ATOM 1 O3' G A 47 -33.068 -56.476 65.615 1.00 0.01 O
ATOM 2 P A A 48 -32.676 -55.719 66.985 1.00 7.91 P
ATOM 3 OP1 A A 48 -32.222 -56.756 67.934 1.00 7.91 O
ATOM 4 OP2 A A 48 -33.828 -54.856 67.365 1.00 7.91 O
ATOM 5 O5' A A 48 -31.456 -54.811 66.547 1.00 7.91 O
ATOM 6 C5' A A 48 -31.656 -53.788 65.612 1.00 7.91 C
ATOM 7 C4' A A 48 -30.542 -52.806 65.639 1.00 7.91 C
ATOM 8 O4' A A 48 -30.712 -51.879 64.545 1.00 7.91 O
ATOM 9 C3' A A 48 -30.456 -51.951 66.891 1.00 7.91 C
ATOM 10 O3' A A 48 -29.105 -51.554 67.076 1.00 7.91 O
ATOM 11 C2' A A 48 -31.265 -50.734 66.511 1.00 7.91 C
ATOM 12 O2' A A 48 -30.952 -49.590 67.257 1.00 7.91 O
ATOM 13 C1' A A 48 -30.866 -50.570 65.052 1.00 7.91 C
ATOM 14 N9 A A 48 -31.860 -49.893 64.231 1.00 7.90 N
ATOM 15 C8 A A 48 -31.652 -48.863 63.362 1.00 7.90 C
ATOM 16 N7 A A 48 -32.729 -48.474 62.748 1.00 7.90 N
ATOM 17 C5 A A 48 -33.694 -49.314 63.240 1.00 7.90 C
ATOM 18 C6 A A 48 -35.044 -49.392 62.956 1.00 7.90 C
ATOM 19 N6 A A 48 -35.637 -48.578 62.087 1.00 7.90 N
ATOM 20 N1 A A 48 -35.739 -50.349 63.597 1.00 7.90 N
ATOM 21 C2 A A 48 -35.099 -51.150 64.456 1.00 7.90 C
ATOM 22 N3 A A 48 -33.828 -51.165 64.810 1.00 7.90 N
ATOM 23 C4 A A 48 -33.180 -50.205 64.150 1.00 7.90 C
ATOM 24 P U A 49 -28.442 -51.623 68.512 1.00 17.73 P
ATOM 25 OP1 U A 49 -29.551 -51.570 69.493 1.00 17.73 O
ATOM 26 OP2 U A 49 -27.400 -50.583 68.542 1.00 17.73 O
ATOM 27 O5' U A 49 -27.774 -53.063 68.541 1.00 17.73 O
TER
ATOM 1 O3' A B 175 -41.686 -47.879 67.058 1.00 0.43 O
ATOM 2 P G B 176 -41.480 -49.217 66.215 1.00 0.01 P
ATOM 3 OP1 G B 176 -42.750 -49.992 66.298 1.00 0.01 O
ATOM 4 OP2 G B 176 -40.220 -49.844 66.691 1.00 0.01 O
ATOM 5 O5' G B 176 -41.287 -48.657 64.744 1.00 0.01 O
ATOM 6 C5' G B 176 -41.921 -47.462 64.327 1.00 0.01 C
ATOM 7 C4' G B 176 -41.110 -46.741 63.286 1.00 0.01 C
ATOM 8 O4' G B 176 -39.913 -46.195 63.907 1.00 0.01 O
ATOM 9 C3' G B 176 -40.613 -47.609 62.112 1.00 0.01 C
ATOM 10 O3' G B 176 -40.855 -46.964 60.857 1.00 0.01 O
ATOM 11 C2' G B 176 -39.112 -47.680 62.354 1.00 0.01 C
ATOM 12 O2' G B 176 -38.327 -47.832 61.199 1.00 0.01 O
ATOM 13 C1' G B 176 -38.860 -46.351 63.006 1.00 0.01 C
ATOM 14 N9 G B 176 -37.584 -46.287 63.682 1.00 0.09 N
ATOM 15 C8 G B 176 -36.605 -45.417 63.315 1.00 0.09 C
ATOM 16 N7 G B 176 -35.508 -45.591 63.978 1.00 0.09 N
ATOM 17 C5 G B 176 -35.767 -46.682 64.794 1.00 0.09 C
ATOM 18 C6 G B 176 -34.930 -47.341 65.745 1.00 0.09 C
ATOM 19 O6 G B 176 -33.749 -47.051 66.046 1.00 0.09 O
ATOM 20 N1 G B 176 -35.579 -48.407 66.367 1.00 0.09 N
ATOM 21 C2 G B 176 -36.865 -48.763 66.092 1.00 0.09 C
ATOM 22 N2 G B 176 -37.335 -49.812 66.764 1.00 0.09 N
ATOM 23 N3 G B 176 -37.650 -48.153 65.226 1.00 0.09 N
ATOM 24 C4 G B 176 -37.046 -47.134 64.604 1.00 0.09 C
ATOM 25 P G B 177 -41.962 -47.548 59.853 1.00 0.01 P
ATOM 26 OP1 G B 177 -42.238 -46.501 58.865 1.00 0.01 O
ATOM 27 OP2 G B 177 -43.062 -48.061 60.695 1.00 0.01 O
ATOM 28 O5' G B 177 -41.238 -48.745 59.150 1.00 0.01 O
TER
ATOM 2 P A A 48 -32.676 -55.719 66.985 1.00 7.91 P
ATOM 3 OP1 A A 48 -32.222 -56.756 67.934 1.00 7.91 O
ATOM 4 OP2 A A 48 -33.828 -54.856 67.365 1.00 7.91 O
ATOM 5 O5' A A 48 -31.456 -54.811 66.547 1.00 7.91 O
ATOM 6 C5' A A 48 -31.656 -53.788 65.612 1.00 7.91 C
ATOM 7 C4' A A 48 -30.542 -52.806 65.639 1.00 7.91 C
ATOM 8 O4' A A 48 -30.712 -51.879 64.545 1.00 7.91 O
ATOM 9 C3' A A 48 -30.456 -51.951 66.891 1.00 7.91 C
ATOM 10 O3' A A 48 -29.105 -51.554 67.076 1.00 7.91 O
ATOM 11 C2' A A 48 -31.265 -50.734 66.511 1.00 7.91 C
ATOM 12 O2' A A 48 -30.952 -49.590 67.257 1.00 7.91 O
ATOM 13 C1' A A 48 -30.866 -50.570 65.052 1.00 7.91 C
ATOM 14 N9 A A 48 -31.860 -49.893 64.231 1.00 7.90 N
ATOM 15 C8 A A 48 -31.652 -48.863 63.362 1.00 7.90 C
ATOM 16 N7 A A 48 -32.729 -48.474 62.748 1.00 7.90 N
ATOM 17 C5 A A 48 -33.694 -49.314 63.240 1.00 7.90 C
ATOM 18 C6 A A 48 -35.044 -49.392 62.956 1.00 7.90 C
ATOM 19 N6 A A 48 -35.637 -48.578 62.087 1.00 7.90 N
ATOM 20 N1 A A 48 -35.739 -50.349 63.597 1.00 7.90 N
ATOM 21 C2 A A 48 -35.099 -51.150 64.456 1.00 7.90 C
ATOM 22 N3 A A 48 -33.828 -51.165 64.810 1.00 7.90 N
ATOM 23 C4 A A 48 -33.180 -50.205 64.150 1.00 7.90 C
ATOM 24 P U A 49 -28.442 -51.623 68.512 1.00 17.73 P
ATOM 25 OP1 U A 49 -29.551 -51.570 69.493 1.00 17.73 O
ATOM 26 OP2 U A 49 -27.400 -50.583 68.542 1.00 17.73 O
ATOM 27 O5' U A 49 -27.774 -53.063 68.541 1.00 17.73 O
TER
ATOM 1 O3' A B 175 -41.686 -47.879 67.058 1.00 0.43 O
ATOM 2 P G B 176 -41.480 -49.217 66.215 1.00 0.01 P
ATOM 3 OP1 G B 176 -42.750 -49.992 66.298 1.00 0.01 O
ATOM 4 OP2 G B 176 -40.220 -49.844 66.691 1.00 0.01 O
ATOM 5 O5' G B 176 -41.287 -48.657 64.744 1.00 0.01 O
ATOM 6 C5' G B 176 -41.921 -47.462 64.327 1.00 0.01 C
ATOM 7 C4' G B 176 -41.110 -46.741 63.286 1.00 0.01 C
ATOM 8 O4' G B 176 -39.913 -46.195 63.907 1.00 0.01 O
ATOM 9 C3' G B 176 -40.613 -47.609 62.112 1.00 0.01 C
ATOM 10 O3' G B 176 -40.855 -46.964 60.857 1.00 0.01 O
ATOM 11 C2' G B 176 -39.112 -47.680 62.354 1.00 0.01 C
ATOM 12 O2' G B 176 -38.327 -47.832 61.199 1.00 0.01 O
ATOM 13 C1' G B 176 -38.860 -46.351 63.006 1.00 0.01 C
ATOM 14 N9 G B 176 -37.584 -46.287 63.682 1.00 0.09 N
ATOM 15 C8 G B 176 -36.605 -45.417 63.315 1.00 0.09 C
ATOM 16 N7 G B 176 -35.508 -45.591 63.978 1.00 0.09 N
ATOM 17 C5 G B 176 -35.767 -46.682 64.794 1.00 0.09 C
ATOM 18 C6 G B 176 -34.930 -47.341 65.745 1.00 0.09 C
ATOM 19 O6 G B 176 -33.749 -47.051 66.046 1.00 0.09 O
ATOM 20 N1 G B 176 -35.579 -48.407 66.367 1.00 0.09 N
ATOM 21 C2 G B 176 -36.865 -48.763 66.092 1.00 0.09 C
ATOM 22 N2 G B 176 -37.335 -49.812 66.764 1.00 0.09 N
ATOM 23 N3 G B 176 -37.650 -48.153 65.226 1.00 0.09 N
ATOM 24 C4 G B 176 -37.046 -47.134 64.604 1.00 0.09 C
ATOM 25 P G B 177 -41.962 -47.548 59.853 1.00 0.01 P
ATOM 26 OP1 G B 177 -42.238 -46.501 58.865 1.00 0.01 O
ATOM 27 OP2 G B 177 -43.062 -48.061 60.695 1.00 0.01 O
ATOM 28 O5' G B 177 -41.238 -48.745 59.150 1.00 0.01 O
TER
Atoms:
OP1: (-32.222,-56.756,67.934)
OP2: (-33.828,-54.856,67.365)
C3': (-30.456,-51.951,66.891)
C1': (-30.866,-50.570,65.052)
C5': (-31.656,-53.788,65.612)
O4': (-30.712,-51.879,64.545)
C8: (-31.652,-48.863,63.362)
O2': (-30.952,-49.590,67.257)
C6: (-35.044,-49.392,62.956)
C5: (-33.694,-49.314,63.240)
C4: (-33.180,-50.205,64.150)
P: (-32.676,-55.719,66.985)
C4': (-30.542,-52.806,65.639)
C2': (-31.265,-50.734,66.511)
C2: (-35.099,-51.150,64.456)
N1: (-35.739,-50.349,63.597)
N3: (-33.828,-51.165,64.810)
N6: (-35.637,-48.578,62.087)
N7: (-32.729,-48.474,62.748)
N9: (-31.860,-49.893,64.231)
O5': (-31.456,-54.811,66.547)
O3': (-29.105,-51.554,67.076)
OP2: (-33.828,-54.856,67.365)
C3': (-30.456,-51.951,66.891)
C1': (-30.866,-50.570,65.052)
C5': (-31.656,-53.788,65.612)
O4': (-30.712,-51.879,64.545)
C8: (-31.652,-48.863,63.362)
O2': (-30.952,-49.590,67.257)
C6: (-35.044,-49.392,62.956)
C5: (-33.694,-49.314,63.240)
C4: (-33.180,-50.205,64.150)
P: (-32.676,-55.719,66.985)
C4': (-30.542,-52.806,65.639)
C2': (-31.265,-50.734,66.511)
C2: (-35.099,-51.150,64.456)
N1: (-35.739,-50.349,63.597)
N3: (-33.828,-51.165,64.810)
N6: (-35.637,-48.578,62.087)
N7: (-32.729,-48.474,62.748)
N9: (-31.860,-49.893,64.231)
O5': (-31.456,-54.811,66.547)
O3': (-29.105,-51.554,67.076)
OP1: (-42.750,-49.992,66.298)
OP2: (-40.220,-49.844,66.691)
C3': (-40.613,-47.609,62.112)
C1': (-38.860,-46.351,63.006)
C5': (-41.921,-47.462,64.327)
O6: (-33.749,-47.051,66.046)
O4': (-39.913,-46.195,63.907)
C8: (-36.605,-45.417,63.315)
C2: (-36.865,-48.763,66.092)
C6: (-34.930,-47.341,65.745)
C5: (-35.767,-46.682,64.794)
C4: (-37.046,-47.134,64.604)
P: (-41.480,-49.217,66.215)
C4': (-41.110,-46.741,63.286)
C2': (-39.112,-47.680,62.354)
O2': (-38.327,-47.832,61.199)
N1: (-35.579,-48.407,66.367)
N2: (-37.335,-49.812,66.764)
N3: (-37.650,-48.153,65.226)
N7: (-35.508,-45.591,63.978)
N9: (-37.584,-46.287,63.682)
O5': (-41.287,-48.657,64.744)
O3': (-40.855,-46.964,60.857)
OP2: (-40.220,-49.844,66.691)
C3': (-40.613,-47.609,62.112)
C1': (-38.860,-46.351,63.006)
C5': (-41.921,-47.462,64.327)
O6: (-33.749,-47.051,66.046)
O4': (-39.913,-46.195,63.907)
C8: (-36.605,-45.417,63.315)
C2: (-36.865,-48.763,66.092)
C6: (-34.930,-47.341,65.745)
C5: (-35.767,-46.682,64.794)
C4: (-37.046,-47.134,64.604)
P: (-41.480,-49.217,66.215)
C4': (-41.110,-46.741,63.286)
C2': (-39.112,-47.680,62.354)
O2': (-38.327,-47.832,61.199)
N1: (-35.579,-48.407,66.367)
N2: (-37.335,-49.812,66.764)
N3: (-37.650,-48.153,65.226)
N7: (-35.508,-45.591,63.978)
N9: (-37.584,-46.287,63.682)
O5': (-41.287,-48.657,64.744)
O3': (-40.855,-46.964,60.857)
Image (generated by PyMOL):