Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKL:A17:A24
Extra
PDB:
ATOM 1 O3' C A 16 5.439 1.991 2.285 1.00 55.20 O
ATOM 2 P A A 17 4.129 2.779 1.832 1.00 54.85 P
ATOM 3 OP1 A A 17 3.042 1.782 1.703 1.00 54.46 O
ATOM 4 OP2 A A 17 4.485 3.633 0.673 1.00 55.14 O
ATOM 5 O5' A A 17 3.823 3.726 3.089 1.00 54.40 O
ATOM 6 C5' A A 17 3.373 3.137 4.307 1.00 54.38 C
ATOM 7 C4' A A 17 3.328 4.135 5.449 1.00 54.21 C
ATOM 8 O4' A A 17 4.626 4.753 5.631 1.00 54.20 O
ATOM 9 C3' A A 17 2.379 5.298 5.241 1.00 54.01 C
ATOM 10 O3' A A 17 1.077 4.939 5.636 1.00 54.44 O
ATOM 11 C2' A A 17 2.973 6.371 6.144 1.00 53.68 C
ATOM 12 O2' A A 17 2.616 6.199 7.501 1.00 53.30 O
ATOM 13 C1' A A 17 4.463 6.127 5.947 1.00 53.92 C
ATOM 14 N9 A A 17 5.051 6.918 4.866 1.00 54.11 N
ATOM 15 C8 A A 17 5.371 6.487 3.604 1.00 54.23 C
ATOM 16 N7 A A 17 5.903 7.410 2.837 1.00 54.12 N
ATOM 17 C5 A A 17 5.936 8.529 3.650 1.00 54.17 C
ATOM 18 C6 A A 17 6.387 9.847 3.430 1.00 53.99 C
ATOM 19 N6 A A 17 6.907 10.258 2.271 1.00 54.07 N
ATOM 20 N1 A A 17 6.278 10.727 4.450 1.00 54.05 N
ATOM 21 C2 A A 17 5.752 10.307 5.609 1.00 54.10 C
ATOM 22 N3 A A 17 5.296 9.095 5.937 1.00 54.17 N
ATOM 23 C4 A A 17 5.415 8.244 4.904 1.00 54.16 C
ATOM 24 P U A 18 -0.143 5.426 4.729 1.00 55.10 P
ATOM 25 OP1 U A 18 -1.408 5.000 5.373 1.00 54.69 O
ATOM 26 OP2 U A 18 0.157 5.015 3.336 1.00 55.41 O
ATOM 27 O5' U A 18 -0.014 7.019 4.810 1.00 54.63 O
TER
ATOM 1 O3' G B 23 8.298 15.548 9.624 1.00 47.60 O
ATOM 2 P G B 24 9.674 15.537 10.450 1.00 47.19 P
ATOM 3 OP1 G B 24 9.671 16.691 11.378 1.00 46.44 O
ATOM 4 OP2 G B 24 10.781 15.375 9.479 1.00 47.12 O
ATOM 5 O5' G B 24 9.582 14.172 11.284 1.00 47.72 O
ATOM 6 C5' G B 24 8.672 14.024 12.377 1.00 47.68 C
ATOM 7 C4' G B 24 8.122 12.608 12.451 1.00 47.77 C
ATOM 8 O4' G B 24 7.157 12.389 11.387 1.00 47.58 O
ATOM 9 C3' G B 24 9.130 11.482 12.260 1.00 48.01 C
ATOM 10 O3' G B 24 9.846 11.205 13.454 1.00 47.89 O
ATOM 11 C2' G B 24 8.195 10.347 11.864 1.00 48.32 C
ATOM 12 O2' G B 24 7.429 9.864 12.951 1.00 48.68 O
ATOM 13 C1' G B 24 7.303 11.077 10.869 1.00 48.62 C
ATOM 14 N9 G B 24 7.894 11.148 9.529 1.00 48.99 N
ATOM 15 C8 G B 24 8.455 12.250 8.921 1.00 49.29 C
ATOM 16 N7 G B 24 8.912 12.019 7.722 1.00 49.05 N
ATOM 17 C5 G B 24 8.646 10.676 7.520 1.00 48.88 C
ATOM 18 C6 G B 24 8.917 9.863 6.398 1.00 49.11 C
ATOM 19 O6 G B 24 9.465 10.191 5.338 1.00 49.33 O
ATOM 20 N1 G B 24 8.485 8.550 6.590 1.00 49.18 N
ATOM 21 C2 G B 24 7.866 8.086 7.728 1.00 49.14 C
ATOM 22 N2 G B 24 7.514 6.792 7.731 1.00 49.07 N
ATOM 23 N3 G B 24 7.609 8.842 8.791 1.00 49.17 N
ATOM 24 C4 G B 24 8.025 10.121 8.619 1.00 48.83 C
ATOM 25 P C B 25 11.371 10.720 13.375 1.00 48.00 P
ATOM 26 OP1 C B 25 11.888 10.629 14.759 1.00 48.32 O
ATOM 27 OP2 C B 25 12.092 11.538 12.378 1.00 47.99 O
ATOM 28 O5' C B 25 11.231 9.260 12.764 1.00 49.11 O
TER
ATOM 2 P A A 17 4.129 2.779 1.832 1.00 54.85 P
ATOM 3 OP1 A A 17 3.042 1.782 1.703 1.00 54.46 O
ATOM 4 OP2 A A 17 4.485 3.633 0.673 1.00 55.14 O
ATOM 5 O5' A A 17 3.823 3.726 3.089 1.00 54.40 O
ATOM 6 C5' A A 17 3.373 3.137 4.307 1.00 54.38 C
ATOM 7 C4' A A 17 3.328 4.135 5.449 1.00 54.21 C
ATOM 8 O4' A A 17 4.626 4.753 5.631 1.00 54.20 O
ATOM 9 C3' A A 17 2.379 5.298 5.241 1.00 54.01 C
ATOM 10 O3' A A 17 1.077 4.939 5.636 1.00 54.44 O
ATOM 11 C2' A A 17 2.973 6.371 6.144 1.00 53.68 C
ATOM 12 O2' A A 17 2.616 6.199 7.501 1.00 53.30 O
ATOM 13 C1' A A 17 4.463 6.127 5.947 1.00 53.92 C
ATOM 14 N9 A A 17 5.051 6.918 4.866 1.00 54.11 N
ATOM 15 C8 A A 17 5.371 6.487 3.604 1.00 54.23 C
ATOM 16 N7 A A 17 5.903 7.410 2.837 1.00 54.12 N
ATOM 17 C5 A A 17 5.936 8.529 3.650 1.00 54.17 C
ATOM 18 C6 A A 17 6.387 9.847 3.430 1.00 53.99 C
ATOM 19 N6 A A 17 6.907 10.258 2.271 1.00 54.07 N
ATOM 20 N1 A A 17 6.278 10.727 4.450 1.00 54.05 N
ATOM 21 C2 A A 17 5.752 10.307 5.609 1.00 54.10 C
ATOM 22 N3 A A 17 5.296 9.095 5.937 1.00 54.17 N
ATOM 23 C4 A A 17 5.415 8.244 4.904 1.00 54.16 C
ATOM 24 P U A 18 -0.143 5.426 4.729 1.00 55.10 P
ATOM 25 OP1 U A 18 -1.408 5.000 5.373 1.00 54.69 O
ATOM 26 OP2 U A 18 0.157 5.015 3.336 1.00 55.41 O
ATOM 27 O5' U A 18 -0.014 7.019 4.810 1.00 54.63 O
TER
ATOM 1 O3' G B 23 8.298 15.548 9.624 1.00 47.60 O
ATOM 2 P G B 24 9.674 15.537 10.450 1.00 47.19 P
ATOM 3 OP1 G B 24 9.671 16.691 11.378 1.00 46.44 O
ATOM 4 OP2 G B 24 10.781 15.375 9.479 1.00 47.12 O
ATOM 5 O5' G B 24 9.582 14.172 11.284 1.00 47.72 O
ATOM 6 C5' G B 24 8.672 14.024 12.377 1.00 47.68 C
ATOM 7 C4' G B 24 8.122 12.608 12.451 1.00 47.77 C
ATOM 8 O4' G B 24 7.157 12.389 11.387 1.00 47.58 O
ATOM 9 C3' G B 24 9.130 11.482 12.260 1.00 48.01 C
ATOM 10 O3' G B 24 9.846 11.205 13.454 1.00 47.89 O
ATOM 11 C2' G B 24 8.195 10.347 11.864 1.00 48.32 C
ATOM 12 O2' G B 24 7.429 9.864 12.951 1.00 48.68 O
ATOM 13 C1' G B 24 7.303 11.077 10.869 1.00 48.62 C
ATOM 14 N9 G B 24 7.894 11.148 9.529 1.00 48.99 N
ATOM 15 C8 G B 24 8.455 12.250 8.921 1.00 49.29 C
ATOM 16 N7 G B 24 8.912 12.019 7.722 1.00 49.05 N
ATOM 17 C5 G B 24 8.646 10.676 7.520 1.00 48.88 C
ATOM 18 C6 G B 24 8.917 9.863 6.398 1.00 49.11 C
ATOM 19 O6 G B 24 9.465 10.191 5.338 1.00 49.33 O
ATOM 20 N1 G B 24 8.485 8.550 6.590 1.00 49.18 N
ATOM 21 C2 G B 24 7.866 8.086 7.728 1.00 49.14 C
ATOM 22 N2 G B 24 7.514 6.792 7.731 1.00 49.07 N
ATOM 23 N3 G B 24 7.609 8.842 8.791 1.00 49.17 N
ATOM 24 C4 G B 24 8.025 10.121 8.619 1.00 48.83 C
ATOM 25 P C B 25 11.371 10.720 13.375 1.00 48.00 P
ATOM 26 OP1 C B 25 11.888 10.629 14.759 1.00 48.32 O
ATOM 27 OP2 C B 25 12.092 11.538 12.378 1.00 47.99 O
ATOM 28 O5' C B 25 11.231 9.260 12.764 1.00 49.11 O
TER
Atoms:
OP1: (3.042,1.782,1.703)
OP2: (4.485,3.633,0.673)
C3': (2.379,5.298,5.241)
C1': (4.463,6.127,5.947)
C5': (3.373,3.137,4.307)
O4': (4.626,4.753,5.631)
C8: (5.371,6.487,3.604)
O2': (2.616,6.199,7.501)
C6: (6.387,9.847,3.430)
C5: (5.936,8.529,3.650)
C4: (5.415,8.244,4.904)
P: (4.129,2.779,1.832)
C4': (3.328,4.135,5.449)
C2': (2.973,6.371,6.144)
C2: (5.752,10.307,5.609)
N1: (6.278,10.727,4.450)
N3: (5.296,9.095,5.937)
N6: (6.907,10.258,2.271)
N7: (5.903,7.410,2.837)
N9: (5.051,6.918,4.866)
O5': (3.823,3.726,3.089)
O3': (1.077,4.939,5.636)
OP2: (4.485,3.633,0.673)
C3': (2.379,5.298,5.241)
C1': (4.463,6.127,5.947)
C5': (3.373,3.137,4.307)
O4': (4.626,4.753,5.631)
C8: (5.371,6.487,3.604)
O2': (2.616,6.199,7.501)
C6: (6.387,9.847,3.430)
C5: (5.936,8.529,3.650)
C4: (5.415,8.244,4.904)
P: (4.129,2.779,1.832)
C4': (3.328,4.135,5.449)
C2': (2.973,6.371,6.144)
C2: (5.752,10.307,5.609)
N1: (6.278,10.727,4.450)
N3: (5.296,9.095,5.937)
N6: (6.907,10.258,2.271)
N7: (5.903,7.410,2.837)
N9: (5.051,6.918,4.866)
O5': (3.823,3.726,3.089)
O3': (1.077,4.939,5.636)
OP1: (9.671,16.691,11.378)
OP2: (10.781,15.375,9.479)
C3': (9.130,11.482,12.260)
C1': (7.303,11.077,10.869)
C5': (8.672,14.024,12.377)
O6: (9.465,10.191,5.338)
O4': (7.157,12.389,11.387)
C8: (8.455,12.250,8.921)
C2: (7.866,8.086,7.728)
C6: (8.917,9.863,6.398)
C5: (8.646,10.676,7.520)
C4: (8.025,10.121,8.619)
P: (9.674,15.537,10.450)
C4': (8.122,12.608,12.451)
C2': (8.195,10.347,11.864)
O2': (7.429,9.864,12.951)
N1: (8.485,8.550,6.590)
N2: (7.514,6.792,7.731)
N3: (7.609,8.842,8.791)
N7: (8.912,12.019,7.722)
N9: (7.894,11.148,9.529)
O5': (9.582,14.172,11.284)
O3': (9.846,11.205,13.454)
OP2: (10.781,15.375,9.479)
C3': (9.130,11.482,12.260)
C1': (7.303,11.077,10.869)
C5': (8.672,14.024,12.377)
O6: (9.465,10.191,5.338)
O4': (7.157,12.389,11.387)
C8: (8.455,12.250,8.921)
C2: (7.866,8.086,7.728)
C6: (8.917,9.863,6.398)
C5: (8.646,10.676,7.520)
C4: (8.025,10.121,8.619)
P: (9.674,15.537,10.450)
C4': (8.122,12.608,12.451)
C2': (8.195,10.347,11.864)
O2': (7.429,9.864,12.951)
N1: (8.485,8.550,6.590)
N2: (7.514,6.792,7.731)
N3: (7.609,8.842,8.791)
N7: (8.912,12.019,7.722)
N9: (7.894,11.148,9.529)
O5': (9.582,14.172,11.284)
O3': (9.846,11.205,13.454)
Image (generated by PyMOL):