ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BNR:C16:C18

Extra

PDB:
ATOM 1 O3' C A 15 -36.321 11.586 22.668 1.00 44.39 O
ATOM 2 P A A 16 -36.061 13.168 22.791 1.00 46.56 P
ATOM 3 OP1 A A 16 -34.900 13.395 23.687 1.00 48.44 O
ATOM 4 OP2 A A 16 -37.354 13.843 23.078 1.00 45.36 O
ATOM 5 O5' A A 16 -35.628 13.617 21.331 1.00 45.11 O
ATOM 6 C5' A A 16 -35.642 14.990 20.973 1.00 44.07 C
ATOM 7 C4' A A 16 -34.496 15.290 20.048 1.00 43.73 C
ATOM 8 O4' A A 16 -33.249 15.093 20.768 1.00 41.17 O
ATOM 9 C3' A A 16 -34.418 14.396 18.815 1.00 43.68 C
ATOM 10 O3' A A 16 -33.882 15.142 17.735 1.00 48.04 O
ATOM 11 C2' A A 16 -33.401 13.347 19.238 1.00 42.25 C
ATOM 12 O2' A A 16 -32.727 12.763 18.147 1.00 41.15 O
ATOM 13 C1' A A 16 -32.429 14.204 20.042 1.00 41.32 C
ATOM 14 N9 A A 16 -31.635 13.434 20.993 1.00 40.67 N
ATOM 15 C8 A A 16 -32.035 12.907 22.197 1.00 39.99 C
ATOM 16 N7 A A 16 -31.088 12.259 22.828 1.00 40.03 N
ATOM 17 C5 A A 16 -29.991 12.370 21.984 1.00 39.07 C
ATOM 18 C6 A A 16 -28.678 11.899 22.084 1.00 38.76 C
ATOM 19 N6 A A 16 -28.226 11.201 23.129 1.00 40.47 N
ATOM 20 N1 A A 16 -27.831 12.173 21.068 1.00 38.12 N
ATOM 21 C2 A A 16 -28.287 12.884 20.032 1.00 39.47 C
ATOM 22 N3 A A 16 -29.501 13.390 19.828 1.00 38.71 N
ATOM 23 C4 A A 16 -30.315 13.091 20.853 1.00 38.90 C
ATOM 24 P A A 17 -34.872 15.820 16.673 1.00 50.27 P
ATOM 25 OP1 A A 17 -36.144 15.059 16.659 1.00 48.12 O
ATOM 26 OP2 A A 17 -34.091 15.990 15.416 1.00 51.11 O
ATOM 27 O5' A A 17 -35.159 17.263 17.281 1.00 51.26 O
TER

ATOM 1 O3' A B 17 -35.298 20.971 19.446 1.00 46.29 O
ATOM 2 P G B 18 -33.943 21.363 20.210 1.00 43.65 P
ATOM 3 OP1 G B 18 -34.170 22.663 20.883 1.00 45.13 O
ATOM 4 OP2 G B 18 -32.829 21.230 19.240 1.00 45.17 O
ATOM 5 O5' G B 18 -33.773 20.231 21.317 1.00 41.95 O
ATOM 6 C5' G B 18 -34.766 20.022 22.314 1.00 37.49 C
ATOM 7 C4' G B 18 -34.292 18.994 23.313 1.00 33.75 C
ATOM 8 O4' G B 18 -34.037 17.731 22.631 1.00 34.36 O
ATOM 9 C3' G B 18 -32.980 19.313 24.015 1.00 31.73 C
ATOM 10 O3' G B 18 -33.206 20.134 25.152 1.00 29.62 O
ATOM 11 C2' G B 18 -32.505 17.925 24.420 1.00 30.96 C
ATOM 12 O2' G B 18 -33.152 17.420 25.565 1.00 30.25 O
ATOM 13 C1' G B 18 -32.893 17.105 23.191 1.00 30.59 C
ATOM 14 N9 G B 18 -31.834 17.082 22.186 1.00 30.18 N
ATOM 15 C8 G B 18 -31.845 17.663 20.939 1.00 28.77 C
ATOM 16 N7 G B 18 -30.740 17.456 20.268 1.00 29.34 N
ATOM 17 C5 G B 18 -29.956 16.694 21.124 1.00 28.71 C
ATOM 18 C6 G B 18 -28.649 16.174 20.953 1.00 26.87 C
ATOM 19 O6 G B 18 -27.914 16.264 19.972 1.00 26.26 O
ATOM 20 N1 G B 18 -28.218 15.485 22.082 1.00 24.74 N
ATOM 21 C2 G B 18 -28.953 15.315 23.229 1.00 27.38 C
ATOM 22 N2 G B 18 -28.365 14.628 24.222 1.00 25.70 N
ATOM 23 N3 G B 18 -30.180 15.787 23.396 1.00 27.76 N
ATOM 24 C4 G B 18 -30.613 16.462 22.313 1.00 28.15 C
ATOM 25 P U B 19 -32.103 21.222 25.590 1.00 31.50 P
ATOM 26 OP1 U B 19 -32.614 21.837 26.842 1.00 31.33 O
ATOM 27 OP2 U B 19 -31.728 22.098 24.452 1.00 27.57 O
ATOM 28 O5' U B 19 -30.810 20.345 25.901 1.00 29.45 O
TER

Atoms:
OP1: (-34.900,13.395,23.687)
OP2: (-37.354,13.843,23.078)
C3': (-34.418,14.396,18.815)
C1': (-32.429,14.204,20.042)
C5': (-35.642,14.990,20.973)
O4': (-33.249,15.093,20.768)
C8: (-32.035,12.907,22.197)
O2': (-32.727,12.763,18.147)
C6: (-28.678,11.899,22.084)
C5: (-29.991,12.370,21.984)
C4: (-30.315,13.091,20.853)
P: (-36.061,13.168,22.791)
C4': (-34.496,15.290,20.048)
C2': (-33.401,13.347,19.238)
C2: (-28.287,12.884,20.032)
N1: (-27.831,12.173,21.068)
N3: (-29.501,13.390,19.828)
N6: (-28.226,11.201,23.129)
N7: (-31.088,12.259,22.828)
N9: (-31.635,13.434,20.993)
O5': (-35.628,13.617,21.331)
O3': (-33.882,15.142,17.735)
OP1: (-34.170,22.663,20.883)
OP2: (-32.829,21.230,19.240)
C3': (-32.980,19.313,24.015)
C1': (-32.893,17.105,23.191)
C5': (-34.766,20.022,22.314)
O6: (-27.914,16.264,19.972)
O4': (-34.037,17.731,22.631)
C8: (-31.845,17.663,20.939)
C2: (-28.953,15.315,23.229)
C6: (-28.649,16.174,20.953)
C5: (-29.956,16.694,21.124)
C4: (-30.613,16.462,22.313)
P: (-33.943,21.363,20.210)
C4': (-34.292,18.994,23.313)
C2': (-32.505,17.925,24.420)
O2': (-33.152,17.420,25.565)
N1: (-28.218,15.485,22.082)
N2: (-28.365,14.628,24.222)
N3: (-30.180,15.787,23.396)
N7: (-30.740,17.456,20.268)
N9: (-31.834,17.082,22.186)
O5': (-33.773,20.231,21.317)
O3': (-33.206,20.134,25.152)
Image (generated by PyMOL):
PyMOL image
show in jmol